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Aliases for RN7SL197P Gene

Subcategory (RNA class) for RN7SL197P Gene

lncRNA

Aliases for RN7SL197P Gene

  • RNA, 7SL, Cytoplasmic 197, Pseudogene 2 3 5

External Ids for RN7SL197P Gene

ORGUL Members for RN7SL197P Gene

Previous GeneCards Identifiers for RN7SL197P Gene

  • GC20P048344
  • GC00U936239

Summaries for RN7SL197P Gene

GeneCards Summary for RN7SL197P Gene

RN7SL197P (RNA, 7SL, Cytoplasmic 197, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL197P Gene

Genomics for RN7SL197P Gene

Regulatory Elements for RN7SL197P Gene

Enhancers for RN7SL197P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20F049724 1.3 FANTOM5 Ensembl ENCODE 0.8 +3.4 3445 2.0 ELF3 PKNOX1 CBX3 RAD21 ELK1 SCRT2 ZNF207 ZNF548 FOS NFYC SNAI1 SLC9A8 LINC01273 B4GALT5 ENSG00000232043 ZNFX1 CEBPB KRT18P4 TMEM189 RNF114
GH20F049717 1.4 FANTOM5 Ensembl ENCODE 0.8 -3.9 -3915 1.4 TBP PKNOX1 RAD21 RFX5 SCRT2 ZNF207 RCOR1 FOS CREM CEBPB SLC9A8 SNAI1 B4GALT5 CEBPB ZNFX1 TMEM189 RNF114 RN7SL197P
GH20F049726 0.5 ENCODE 0.8 +4.7 4682 0.2 ZFHX2 SCRT2 EGR2 GC20M049730 RN7SL197P
GH20F049727 1.4 FANTOM5 Ensembl ENCODE 0.4 +5.7 5743 1.8 HDGF PKNOX1 ESRRA SIN3A CEBPG ZBTB40 ARID3A FOXK2 ZNF207 FOSL2 SLC9A8 SNAI1 B4GALT5 CEBPB ZNFX1 TMEM189 RNF114 GC20M049730 RN7SL197P
GH20F049729 0.6 Ensembl 0.4 +7.9 7853 0.4 ZSCAN16 GABPA ZKSCAN1 GC20M049730 RN7SL197P
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RN7SL197P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL197P Gene

Chromosome:
20
Start:
49,721,949 bp from pter
End:
49,722,247 bp from pter
Size:
299 bases
Orientation:
Plus strand

Genomic View for RN7SL197P Gene

Genes around RN7SL197P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL197P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL197P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL197P Gene

Proteins for RN7SL197P Gene

Post-translational modifications for RN7SL197P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL197P Gene

Domains & Families for RN7SL197P Gene

Gene Families for RN7SL197P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL197P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL197P Gene

Function for RN7SL197P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL197P Gene

Localization for RN7SL197P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL197P Gene

Pathways & Interactions for RN7SL197P Gene

SuperPathways for RN7SL197P Gene

No Data Available

Interacting Proteins for RN7SL197P Gene

Gene Ontology (GO) - Biological Process for RN7SL197P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL197P Gene

Transcripts for RN7SL197P Gene

mRNA/cDNA for RN7SL197P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL197P Gene

No ASD Table

Relevant External Links for RN7SL197P Gene

GeneLoc Exon Structure for
RN7SL197P
ECgene alternative splicing isoforms for
RN7SL197P

Expression for RN7SL197P Gene

mRNA expression in normal human tissues for RN7SL197P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL197P Gene:

RN7SL197P
genes like me logo Genes that share expression patterns with RN7SL197P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RN7SL197P Gene

Orthologs for RN7SL197P Gene

Evolution for RN7SL197P Gene

ENSEMBL:
Gene Tree for RN7SL197P (if available)
TreeFam:
Gene Tree for RN7SL197P (if available)

No data available for Orthologs for RN7SL197P Gene

Paralogs for RN7SL197P Gene

No data available for Paralogs for RN7SL197P Gene

Variants for RN7SL197P Gene

Relevant External Links for RN7SL197P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL197P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL197P Gene

Disorders for RN7SL197P Gene

No disorders were found for RN7SL197P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL197P Gene

Publications for RN7SL197P Gene

No publications were found for RN7SL197P Gene.

Products for RN7SL197P Gene

Sources for RN7SL197P Gene

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