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Aliases for RN7SL187P Gene

Subcategory (RNA class) for RN7SL187P Gene

lncRNA

Aliases for RN7SL187P Gene

  • RNA, 7SL, Cytoplasmic 187, Pseudogene 2 3 5

External Ids for RN7SL187P Gene

ORGUL Members for RN7SL187P Gene

Previous GeneCards Identifiers for RN7SL187P Gene

  • GC09P124258

Summaries for RN7SL187P Gene

GeneCards Summary for RN7SL187P Gene

RN7SL187P (RNA, 7SL, Cytoplasmic 187, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL187P Gene

Genomics for RN7SL187P Gene

Regulatory Elements for RN7SL187P Gene

Enhancers for RN7SL187P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F121498 0.8 FANTOM5 ENCODE 0.8 +4.9 4940 2.4 SIN3A FEZF1 ZNF2 ZNF121 ZNF143 ZNF207 KLF7 FOS ZNF263 SP3 GGTA1P GSN RN7SL187P
GH09F121493 0.6 Ensembl ENCODE 0.8 -0.2 -218 1.0 SOX5 SOX13 BHLHE40 MAX ZMYM3 SMARCA4 POLR2A ZNF341 KDM1A SPI1 GGTA1P RN7SL187P LOC102724773
GH09F121492 0.7 Ensembl 0.8 -1.4 -1418 1.0 BCOR HDAC2 IKZF1 ZNF143 ZMYM3 KDM1A TBX21 GGTA1P RN7SL187P LOC102724773
GH09F121484 1 Ensembl ENCODE 0.4 -8.5 -8535 2.8 PKNOX1 NFIA ZFP64 ZNF518A ATF2 NR2F2 ZFHX2 POLR2A SMARCA4 NR2F6 GGTA1P RN7SL187P LOC102724773
GH09F121483 0.2 Ensembl 0.4 -11.1 -11119 0.8 SOX13 TFAP4 ESRRA SAP130 JUN RARA TEAD3 E2F1 GATA3 CTBP1 GGTA1P RN7SL187P LOC102724773
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RN7SL187P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL187P Gene

Chromosome:
9
Start:
121,494,519 bp from pter
End:
121,494,821 bp from pter
Size:
303 bases
Orientation:
Plus strand

Genomic View for RN7SL187P Gene

Genes around RN7SL187P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL187P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL187P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL187P Gene

Proteins for RN7SL187P Gene

Post-translational modifications for RN7SL187P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL187P Gene

Domains & Families for RN7SL187P Gene

Gene Families for RN7SL187P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL187P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL187P Gene

Function for RN7SL187P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL187P Gene

Localization for RN7SL187P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL187P Gene

Pathways & Interactions for RN7SL187P Gene

SuperPathways for RN7SL187P Gene

No Data Available

Interacting Proteins for RN7SL187P Gene

Gene Ontology (GO) - Biological Process for RN7SL187P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL187P Gene

Transcripts for RN7SL187P Gene

mRNA/cDNA for RN7SL187P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL187P Gene

No ASD Table

Relevant External Links for RN7SL187P Gene

GeneLoc Exon Structure for
RN7SL187P
ECgene alternative splicing isoforms for
RN7SL187P

Expression for RN7SL187P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SL187P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL187P Gene:

RN7SL187P
genes like me logo Genes that share expression patterns with RN7SL187P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RN7SL187P Gene

Orthologs for RN7SL187P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL187P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 35
  • 99 (a)
OneToOne
Species where no ortholog for RN7SL187P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL187P Gene

ENSEMBL:
Gene Tree for RN7SL187P (if available)
TreeFam:
Gene Tree for RN7SL187P (if available)

Paralogs for RN7SL187P Gene

No data available for Paralogs for RN7SL187P Gene

Variants for RN7SL187P Gene

Relevant External Links for RN7SL187P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL187P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL187P Gene

Disorders for RN7SL187P Gene

No disorders were found for RN7SL187P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL187P Gene

Publications for RN7SL187P Gene

No publications were found for RN7SL187P Gene.

Products for RN7SL187P Gene

Sources for RN7SL187P Gene

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