Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RN7SL146P Gene

Subcategory (RNA class) for RN7SL146P Gene

lncRNA

Aliases for RN7SL146P Gene

  • RNA, 7SL, Cytoplasmic 146, Pseudogene 2 3 5

External Ids for RN7SL146P Gene

ORGUL Members for RN7SL146P Gene

Previous GeneCards Identifiers for RN7SL146P Gene

  • GC19M016652

Summaries for RN7SL146P Gene

GeneCards Summary for RN7SL146P Gene

RN7SL146P (RNA, 7SL, Cytoplasmic 146, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL146P Gene

Genomics for RN7SL146P Gene

Regulatory Elements for RN7SL146P Gene

Enhancers for RN7SL146P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F016568 1.1 ENCODE 12.4 -32.2 -32208 7.6 HDGF PKNOX1 MLX CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 C19orf44 SMIM7 ENSG00000269578 ENSG00000268743 TMEM38A ENSG00000268087 SIN3B ENSG00000267904 PLVAP CHERP
GH19F016577 0.2 ENCODE 12.3 -38.1 -38125 1.2 POLR2A EBF1 CHERP RN7SL146P ENSG00000141979 SMIM7 TMEM38A C19orf44 EPS15L1 PIR43667 GC19P018790
GH19F016492 0.6 ENCODE 12.1 +47.1 47063 0.8 MLX ARID4B ZNF48 YY1 FOS SP5 PPARG KAT8 SREBF1 MIER3 CHERP RN7SL146P CPAMD8 EPS15L1 CALR3
GH19F016489 0.8 Ensembl ENCODE 12.1 +50.9 50874 0.2 MLX ZFP64 FEZF1 THRB ZNF48 YY1 RARA SCRT2 KLF7 ZNF548 C19orf44 RN7SL146P CHERP ENSG00000269578 ENSG00000268743 CPAMD8 SMIM7 CALR3 EPS15L1
GH19F016607 1.1 Ensembl ENCODE 11.8 -73.9 -73917 13.0 HDGF PKNOX1 FEZF1 ZNF2 REST TSHZ1 ZNF623 TBX21 MYNN PBX2 C19orf44 EPS15L1 SMIM7 CALR3 SLC35E1 TMEM38A CHERP RN7SL146P CPAMD8 ENSG00000269044
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RN7SL146P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL146P Gene

Chromosome:
19
Start:
16,539,688 bp from pter
End:
16,539,984 bp from pter
Size:
297 bases
Orientation:
Minus strand

Genomic View for RN7SL146P Gene

Genes around RN7SL146P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL146P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL146P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL146P Gene

Proteins for RN7SL146P Gene

Post-translational modifications for RN7SL146P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL146P Gene

Domains & Families for RN7SL146P Gene

Gene Families for RN7SL146P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL146P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL146P Gene

Function for RN7SL146P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL146P Gene

Localization for RN7SL146P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL146P Gene

Pathways & Interactions for RN7SL146P Gene

SuperPathways for RN7SL146P Gene

No Data Available

Interacting Proteins for RN7SL146P Gene

Gene Ontology (GO) - Biological Process for RN7SL146P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL146P Gene

Transcripts for RN7SL146P Gene

mRNA/cDNA for RN7SL146P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL146P Gene

No ASD Table

Relevant External Links for RN7SL146P Gene

GeneLoc Exon Structure for
RN7SL146P
ECgene alternative splicing isoforms for
RN7SL146P

Expression for RN7SL146P Gene

mRNA expression in normal human tissues for RN7SL146P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL146P Gene:

RN7SL146P
genes like me logo Genes that share expression patterns with RN7SL146P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RN7SL146P Gene

Orthologs for RN7SL146P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL146P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 35
  • 99 (a)
OneToOne
Species where no ortholog for RN7SL146P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL146P Gene

ENSEMBL:
Gene Tree for RN7SL146P (if available)
TreeFam:
Gene Tree for RN7SL146P (if available)

Paralogs for RN7SL146P Gene

No data available for Paralogs for RN7SL146P Gene

Variants for RN7SL146P Gene

Relevant External Links for RN7SL146P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL146P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL146P Gene

Disorders for RN7SL146P Gene

No disorders were found for RN7SL146P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL146P Gene

Publications for RN7SL146P Gene

No publications were found for RN7SL146P Gene.

Products for RN7SL146P Gene

Sources for RN7SL146P Gene

Content
Loading form....