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Aliases for RN7SL145P Gene

Subcategory (RNA class) for RN7SL145P Gene

lncRNA

Aliases for RN7SL145P Gene

  • RNA, 7SL, Cytoplasmic 145, Pseudogene 2 3 5

External Ids for RN7SL145P Gene

ORGUL Members for RN7SL145P Gene

Previous GeneCards Identifiers for RN7SL145P Gene

  • GC03P045785

Summaries for RN7SL145P Gene

GeneCards Summary for RN7SL145P Gene

RN7SL145P (RNA, 7SL, Cytoplasmic 145, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL145P Gene

Genomics for RN7SL145P Gene

Regulatory Elements for RN7SL145P Gene

Enhancers for RN7SL145P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G045638 2.1 FANTOM5 Ensembl ENCODE dbSUPER 12 -99.1 -99065 9.6 CREB3L1 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 SP3 NFYC TBX21 MEF2D LIMD1 SACM1L XCR1 RPS24P8 ZNF501 RN7SL145P LARS2-AS1 LIMD1-AS1 EXOSC7 ZDHHC3
GH03G045052 2 FANTOM5 Ensembl ENCODE dbSUPER 11.9 -683.1 -683146 13.7 HDGF PKNOX1 CREB3L1 ARNT YY1 ZNF766 FOS KLF13 REST TBX21 EXOSC7 CLEC3B XCR1 CDCP1 ZNF660 RN7SL145P RNU5B-3P TMEM158 ENSG00000202268 ZDHHC3
GH03G046392 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.9 +652.1 652098 5.3 PKNOX1 ATF1 ARNT GTF3C2 ZNF766 ZNF143 REST TBX21 SMARCA4 PBX2 CCRL2 CCR5 CCR1 CCDC12 CCR2 RN7SL145P XCR1 LOC102724297 LRRC2 TDGF1
GH03G045653 1.5 Ensembl ENCODE dbSUPER 13.8 -87.3 -87266 4.2 HDGF PKNOX1 FOXA2 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 GLIS2 ZNF143 SACM1L LIMD1 ZNF502 RN7SL145P LARS2-AS1 LIMD1-AS1 CCR3 GC03M045664 PIR32515
GH03G045687 1.7 Ensembl ENCODE dbSUPER 12.1 -50.8 -50756 8.1 CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC TBX21 SSRP1 SACM1L LIMD1 XCR1 RN7SL145P EXOSC7 LARS2-AS1 ZDHHC3 CCR9 SDHDP4 LIMD1-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL145P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL145P Gene

Chromosome:
3
Start:
45,742,675 bp from pter
End:
45,742,970 bp from pter
Size:
296 bases
Orientation:
Plus strand

Genomic View for RN7SL145P Gene

Genes around RN7SL145P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL145P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL145P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL145P Gene

Proteins for RN7SL145P Gene

Post-translational modifications for RN7SL145P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL145P Gene

Domains & Families for RN7SL145P Gene

Gene Families for RN7SL145P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL145P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL145P Gene

Function for RN7SL145P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL145P Gene

Localization for RN7SL145P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL145P Gene

Pathways & Interactions for RN7SL145P Gene

SuperPathways for RN7SL145P Gene

No Data Available

Interacting Proteins for RN7SL145P Gene

Gene Ontology (GO) - Biological Process for RN7SL145P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL145P Gene

Transcripts for RN7SL145P Gene

mRNA/cDNA for RN7SL145P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL145P Gene

No ASD Table

Relevant External Links for RN7SL145P Gene

GeneLoc Exon Structure for
RN7SL145P
ECgene alternative splicing isoforms for
RN7SL145P

Expression for RN7SL145P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL145P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL145P Gene:

RN7SL145P
genes like me logo Genes that share expression patterns with RN7SL145P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL145P Gene

Orthologs for RN7SL145P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL145P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 35
  • 99 (a)
OneToOne
Species where no ortholog for RN7SL145P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL145P Gene

ENSEMBL:
Gene Tree for RN7SL145P (if available)
TreeFam:
Gene Tree for RN7SL145P (if available)

Paralogs for RN7SL145P Gene

No data available for Paralogs for RN7SL145P Gene

Variants for RN7SL145P Gene

Relevant External Links for RN7SL145P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL145P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL145P Gene

Disorders for RN7SL145P Gene

No disorders were found for RN7SL145P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL145P Gene

Publications for RN7SL145P Gene

No publications were found for RN7SL145P Gene.

Products for RN7SL145P Gene

Sources for RN7SL145P Gene

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