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Aliases for RN7SL145P Gene

Subcategory (RNA class) for RN7SL145P Gene

lncRNA

Aliases for RN7SL145P Gene

  • RNA, 7SL, Cytoplasmic 145, Pseudogene 2 3 5

External Ids for RN7SL145P Gene

ORGUL Members for RN7SL145P Gene

Previous GeneCards Identifiers for RN7SL145P Gene

  • GC03P045785

Summaries for RN7SL145P Gene

GeneCards Summary for RN7SL145P Gene

RN7SL145P (RNA, 7SL, Cytoplasmic 145, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RN7SL145P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL145P Gene

Genomics for RN7SL145P Gene

GeneHancer (GH) Regulatory Elements for RN7SL145P Gene

Promoters and enhancers for RN7SL145P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I045740 Enhancer 0.5 ENCODE 550.8 -0.9 -925 2.5 ZNF316 MAFG ETV6 MAFK EMSY RN7SL145P SACM1L LIMD1-AS1 LZTFL1 CCR9 SDHDP4 LIMD1
GH03I045117 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 33.4 -619.7 -619686 10.7 HDGF PKNOX1 ARNT SIN3A ATF7 FOS ZNF623 ZNF592 ATF4 GMEB1 RN7SL145P ZNF852 LIMD1 ZNF502 ZNF445 TMEM158 ZNF197 FYCO1 CDCP1 RNU5B-3P
GH03I045687 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 19.4 -50.8 -50779 8.2 ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC SACM1L ZNF502 LIMD1 RN7SL145P RPS24P8 ZNF501 ZDHHC3 LARS2-AS1 SDHDP4 CCR9
GH03I045130 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 24.8 -606.7 -606684 11.1 HDGF PKNOX1 SMAD1 ARNT POLR2B ZNF766 CBX5 E2F8 FOS REST ZNF502 ZNF852 RN7SL145P ZNF35 ZNF197 RNU5B-3P CLEC3B TMEM158 SACM1L ZDHHC3
GH03I045052 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 24.8 -683.1 -683146 13.7 HDGF PKNOX1 ARNT YY1 POLR2B ZNF766 E2F8 ZNF143 FOS REST ZNF502 ZNF852 RN7SL145P CLEC3B ZNF35 CDCP1 ZNF197 ZNF660 EXOSC7 RNU5B-3P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RN7SL145P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SL145P Gene

Genomic Locations for RN7SL145P Gene
chr3:45,742,675-45,742,970
(GRCh38/hg38)
Size:
296 bases
Orientation:
Plus strand
chr3:45,784,167-45,784,460
(GRCh37/hg19)

Genomic View for RN7SL145P Gene

Genes around RN7SL145P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL145P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL145P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL145P Gene

Proteins for RN7SL145P Gene

Post-translational modifications for RN7SL145P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL145P Gene

Domains & Families for RN7SL145P Gene

Gene Families for RN7SL145P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL145P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL145P Gene

Function for RN7SL145P Gene

Phenotypes From GWAS Catalog for RN7SL145P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL145P Gene

Localization for RN7SL145P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL145P Gene

Pathways & Interactions for RN7SL145P Gene

SuperPathways for RN7SL145P Gene

No Data Available

Interacting Proteins for RN7SL145P Gene

Gene Ontology (GO) - Biological Process for RN7SL145P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL145P Gene

Drugs & Compounds for RN7SL145P Gene

No Compound Related Data Available

Transcripts for RN7SL145P Gene

mRNA/cDNA for RN7SL145P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL145P Gene

No ASD Table

Relevant External Links for RN7SL145P Gene

GeneLoc Exon Structure for
RN7SL145P
ECgene alternative splicing isoforms for
RN7SL145P

Expression for RN7SL145P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL145P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL145P Gene:

RN7SL145P
genes like me logo Genes that share expression patterns with RN7SL145P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL145P Gene

Orthologs for RN7SL145P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL145P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 34
  • 99 (a)
OneToOne
Species where no ortholog for RN7SL145P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL145P Gene

ENSEMBL:
Gene Tree for RN7SL145P (if available)
TreeFam:
Gene Tree for RN7SL145P (if available)

Paralogs for RN7SL145P Gene

No data available for Paralogs for RN7SL145P Gene

Variants for RN7SL145P Gene

Additional Variant Information for RN7SL145P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL145P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL145P Gene

Disorders for RN7SL145P Gene

No disorders were found for RN7SL145P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL145P Gene

Publications for RN7SL145P Gene

No publications were found for RN7SL145P Gene.

Products for RN7SL145P Gene

Sources for RN7SL145P Gene

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