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Aliases for RN7SL105P Gene

Subcategory (RNA class) for RN7SL105P Gene

lncRNA

Aliases for RN7SL105P Gene

  • RNA, 7SL, Cytoplasmic 105, Pseudogene 2 3 5

External Ids for RN7SL105P Gene

ORGUL Members for RN7SL105P Gene

Previous GeneCards Identifiers for RN7SL105P Gene

  • GC17M001518
  • GC17M001522

Summaries for RN7SL105P Gene

GeneCards Summary for RN7SL105P Gene

RN7SL105P (RNA, 7SL, Cytoplasmic 105, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RN7SL105P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL105P Gene

Genomics for RN7SL105P Gene

GeneHancer (GH) Regulatory Elements for RN7SL105P Gene

Promoters and enhancers for RN7SL105P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I001602 Enhancer 0.8 ENCODE 550.8 +1.2 1150 1.2 HDGF ELF3 SOX13 FOXA2 SAP130 MLX ARID4B RARA NR2F6 CREM RN7SL105P PIR53488 SLC43A2 GC17M001550
GH17I001604 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.8 -2.3 -2261 5.2 HDGF PKNOX1 FOXA2 MLX IRF4 ZNF143 ATF7 RUNX3 SP5 JUNB SLC43A2 PITPNA SCARF1 WDR81 CRK RN7SL105P GC17P001609 GC17M001550
GH17I001584 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +16.4 16414 6.6 PKNOX1 FOXA2 MLX ARID4B SIN3A ETS1 TCF12 ZNF121 ATF7 FOS SLC43A2 SCARF1 PIR53488 RN7SL105P GC17M001550
GH17I001591 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +11.5 11498 2.8 ELF3 BMI1 ZNF48 RARA ZNF766 ETV6 CREM IKZF2 RUNX3 THAP11 ENSG00000263345 RN7SL105P PIR53488 SLC43A2 GC17M001550
GH17I001597 Enhancer 1 ENCODE dbSUPER 0.4 +6.3 6315 1.5 ELF3 FOXA2 MLX ARID4B DMAP1 RAD21 ZNF48 ZSCAN9 RARA SLC30A9 RILP RN7SL105P PIR53488 SLC43A2 GC17M001550
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RN7SL105P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SL105P Gene

Genomic Locations for RN7SL105P Gene
chr17:1,604,374-1,604,672
(GRCh38/hg38)
Size:
299 bases
Orientation:
Minus strand
chr17:1,507,670-1,507,966
(GRCh37/hg19)

Genomic View for RN7SL105P Gene

Genes around RN7SL105P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL105P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL105P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL105P Gene

Proteins for RN7SL105P Gene

Post-translational modifications for RN7SL105P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL105P Gene

Domains & Families for RN7SL105P Gene

Gene Families for RN7SL105P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL105P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL105P Gene

Function for RN7SL105P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL105P Gene

Localization for RN7SL105P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL105P Gene

Pathways & Interactions for RN7SL105P Gene

SuperPathways for RN7SL105P Gene

No Data Available

Interacting Proteins for RN7SL105P Gene

Gene Ontology (GO) - Biological Process for RN7SL105P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL105P Gene

Drugs & Compounds for RN7SL105P Gene

No Compound Related Data Available

Transcripts for RN7SL105P Gene

mRNA/cDNA for RN7SL105P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL105P Gene

No ASD Table

Relevant External Links for RN7SL105P Gene

GeneLoc Exon Structure for
RN7SL105P
ECgene alternative splicing isoforms for
RN7SL105P

Expression for RN7SL105P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL105P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL105P Gene:

RN7SL105P
genes like me logo Genes that share expression patterns with RN7SL105P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL105P Gene

Orthologs for RN7SL105P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL105P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 34
  • 94 (a)
OneToOne
Species where no ortholog for RN7SL105P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL105P Gene

ENSEMBL:
Gene Tree for RN7SL105P (if available)
TreeFam:
Gene Tree for RN7SL105P (if available)

Paralogs for RN7SL105P Gene

No data available for Paralogs for RN7SL105P Gene

Variants for RN7SL105P Gene

Additional Variant Information for RN7SL105P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL105P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL105P Gene

Disorders for RN7SL105P Gene

No disorders were found for RN7SL105P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL105P Gene

Publications for RN7SL105P Gene

No publications were found for RN7SL105P Gene.

Products for RN7SL105P Gene

Sources for RN7SL105P Gene

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