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Aliases for RN7SKP29 Gene

Subcategory (RNA class) for RN7SKP29 Gene

antisense

Aliases for RN7SKP29 Gene

  • RNA, 7SK Small Nuclear Pseudogene 29 2 3 5

External Ids for RN7SKP29 Gene

ORGUL Members for RN7SKP29 Gene

Previous GeneCards Identifiers for RN7SKP29 Gene

  • GC08P070614

Summaries for RN7SKP29 Gene

GeneCards Summary for RN7SKP29 Gene

RN7SKP29 (RNA, 7SK Small Nuclear Pseudogene 29) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP29 Gene

Genomics for RN7SKP29 Gene

Regulatory Elements for RN7SKP29 Gene

Enhancers for RN7SKP29 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G069763 1.1 Ensembl ENCODE 10.9 +64.2 64186 1.0 HDGF PKNOX1 FOXA2 BMI1 ZBTB40 ZNF366 RELB IKZF2 EGR2 GATAD2B LOC101929759 SLCO5A1 RN7SKP29 LOC105375889 GC08P069795 LOC100101127
GH08G069737 0.8 ENCODE 11 +38.3 38283 1.6 TBP TBL1XR1 YBX1 ZBTB40 RELA GATA3 POLR2A CBX5 EED ETV6 LOC105375889 RN7SKP29 LACTB2 GC08P069795 LOC100101127
GH08G069946 0.8 ENCODE 10.3 +246.1 246117 0.2 CTCF ESRRA MAX ZNF384 RAD21 RARA ZNF316 SMC3 NR2F6 MAFK RNU1-101P RN7SKP29 SDCBPP2 GC08M069988
GH08G070616 0.9 Ensembl ENCODE 8.4 +916.9 916883 1.8 FOXA2 MTA2 NR2F1 ATF2 FOXK2 ZNF585B IKZF1 TARDBP CREB1 IKZF2 XKR9 LACTB2 RN7SKP29 LACTB2-AS1 RN7SL19P
GH08G069643 0.7 ENCODE 10.5 -56.2 -56165 0.8 MAX ZSCAN5C SCRT2 FOS IKZF2 SCRT1 ZNF654 MTA2 NR2F1 BHLHE40 RN7SKP29 SLCO5A1 LOC101929759 GC08M069668 SULF1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SKP29 on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SKP29 Gene

Chromosome:
8
Start:
69,700,224 bp from pter
End:
69,700,495 bp from pter
Size:
272 bases
Orientation:
Plus strand

Genomic View for RN7SKP29 Gene

Genes around RN7SKP29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP29 Gene

Proteins for RN7SKP29 Gene

Post-translational modifications for RN7SKP29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SKP29 Gene

Domains & Families for RN7SKP29 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SKP29 Gene

Function for RN7SKP29 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP29 Gene

Localization for RN7SKP29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SKP29 Gene

Pathways & Interactions for RN7SKP29 Gene

SuperPathways for RN7SKP29 Gene

No Data Available

Interacting Proteins for RN7SKP29 Gene

Gene Ontology (GO) - Biological Process for RN7SKP29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SKP29 Gene

Drugs & Compounds for RN7SKP29 Gene

No Compound Related Data Available

Transcripts for RN7SKP29 Gene

mRNA/cDNA for RN7SKP29 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP29 Gene

No ASD Table

Relevant External Links for RN7SKP29 Gene

GeneLoc Exon Structure for
RN7SKP29
ECgene alternative splicing isoforms for
RN7SKP29

Expression for RN7SKP29 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SKP29 Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP29 Gene:

RN7SKP29
genes like me logo Genes that share expression patterns with RN7SKP29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SKP29 Gene

Orthologs for RN7SKP29 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RN7SKP29 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 7SK 35
  • 81 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm24011 35
  • 61 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 7SK 35 35
  • 58 (a)
OneToMany
cow
(Bos Taurus)
Mammalia 7SK 35
  • 55 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia 7SK 35 35
  • 48 (a)
OneToMany
Species where no ortholog for RN7SKP29 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SKP29 Gene

ENSEMBL:
Gene Tree for RN7SKP29 (if available)
TreeFam:
Gene Tree for RN7SKP29 (if available)

Paralogs for RN7SKP29 Gene

No data available for Paralogs for RN7SKP29 Gene

Variants for RN7SKP29 Gene

Relevant External Links for RN7SKP29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP29 Gene

Disorders for RN7SKP29 Gene

No disorders were found for RN7SKP29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP29 Gene

Publications for RN7SKP29 Gene

No publications were found for RN7SKP29 Gene.

Products for RN7SKP29 Gene

Sources for RN7SKP29 Gene

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