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Aliases for RN7SKP264 Gene

Subcategory (RNA class) for RN7SKP264 Gene

lncRNA

Aliases for RN7SKP264 Gene

  • RNA, 7SK Small Nuclear Pseudogene 264 2 3 5

External Ids for RN7SKP264 Gene

ORGUL Members for RN7SKP264 Gene

Previous GeneCards Identifiers for RN7SKP264 Gene

  • GC09M088875

Summaries for RN7SKP264 Gene

GeneCards Summary for RN7SKP264 Gene

RN7SKP264 (RNA, 7SK Small Nuclear Pseudogene 264) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP264 Gene

Genomics for RN7SKP264 Gene

Regulatory Elements for RN7SKP264 Gene

Enhancers for RN7SKP264 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F086280 1.1 ENCODE 27.3 -23.7 -23714 2.8 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 C9orf153 RN7SKP264 GAS1 ENSG00000270688 LOC102724080 LOC100287212 ENSG00000232211 ENSG00000229454 LOC494127 GAS1RR
GH09F085740 1.5 FANTOM5 ENCODE 16.2 +516.5 516518 3.7 PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 FOS SP3 SP5 JUNB ENSG00000229454 LOC100287212 ENSG00000270688 RN7SKP264 ENSG00000232211 LOC102724080 AGTPBP1 LOC389765 GC09M085748
GH09F086942 1.1 ENCODE 16.2 -687.1 -687065 8.1 PKNOX1 MLX WRNIP1 ARID4B SIN3A DMAP1 FEZF1 ZNF2 YY1 SLC30A9 LOC494127 ENSG00000232211 LOC102724080 ENSG00000270688 LOC100287212 FBP2P1 RN7SKP264 ELF2P3 GAS1RR PIR61502
GH09F086738 0.8 ENCODE 16.2 -479.8 -479825 0.1 ZSCAN5A KLF1 PKNOX1 ZNF133 KLF17 GLI4 ZNF2 ZNF155 ZNF324 ZNF791 ENSG00000232211 LOC102724080 LOC494127 RN7SKP264 ENSG00000270688 LOC100287212 ENSG00000229454 GAS1 GC09M086730 PIR61502
GH09F086349 1.1 ENCODE 10 -94.4 -94436 6.2 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 C9orf153 RN7SKP264 ZCCHC6 GC09M086340
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SKP264 on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SKP264 Gene

Chromosome:
9
Start:
86,258,358 bp from pter
End:
86,258,646 bp from pter
Size:
289 bases
Orientation:
Minus strand

Genomic View for RN7SKP264 Gene

Genes around RN7SKP264 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP264 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP264 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP264 Gene

Proteins for RN7SKP264 Gene

Post-translational modifications for RN7SKP264 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SKP264 Gene

Domains & Families for RN7SKP264 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SKP264 Gene

Function for RN7SKP264 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP264 Gene

Localization for RN7SKP264 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SKP264 Gene

Pathways & Interactions for RN7SKP264 Gene

SuperPathways for RN7SKP264 Gene

No Data Available

Interacting Proteins for RN7SKP264 Gene

Gene Ontology (GO) - Biological Process for RN7SKP264 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SKP264 Gene

Transcripts for RN7SKP264 Gene

mRNA/cDNA for RN7SKP264 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP264 Gene

No ASD Table

Relevant External Links for RN7SKP264 Gene

GeneLoc Exon Structure for
RN7SKP264
ECgene alternative splicing isoforms for
RN7SKP264

Expression for RN7SKP264 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SKP264 Gene

mRNA differential expression in normal tissues according to GTEx for RN7SKP264 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP264 Gene:

RN7SKP264
genes like me logo Genes that share expression patterns with RN7SKP264: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RN7SKP264 Gene

Orthologs for RN7SKP264 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RN7SKP264 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 7SK 35
  • 95 (a)
OneToOne
cow
(Bos Taurus)
Mammalia 7SK 35
  • 59 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm23250 35
  • 59 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia 7SK 35
  • 41 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea 7SK 35 35 35
  • 33 (a)
ManyToMany
Species where no ortholog for RN7SKP264 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SKP264 Gene

ENSEMBL:
Gene Tree for RN7SKP264 (if available)
TreeFam:
Gene Tree for RN7SKP264 (if available)

Paralogs for RN7SKP264 Gene

No data available for Paralogs for RN7SKP264 Gene

Variants for RN7SKP264 Gene

Relevant External Links for RN7SKP264 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP264

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP264 Gene

Disorders for RN7SKP264 Gene

No disorders were found for RN7SKP264 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP264 Gene

Publications for RN7SKP264 Gene

No publications were found for RN7SKP264 Gene.

Products for RN7SKP264 Gene

Sources for RN7SKP264 Gene

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