Aliases for RN7SKP264 Gene
Subcategory (RNA class) for RN7SKP264 Gene
lncRNA
External Ids for RN7SKP264 Gene
- HGNC: 45988
- Entrez Gene: 106479213
- Ensembl: ENSG00000223012
ORGUL Members for RN7SKP264 Gene
Previous GeneCards Identifiers for RN7SKP264 Gene
- GC09M088875
Summaries for RN7SKP264 Gene
GeneCards Summary for RN7SKP264 Gene
RN7SKP264 (RNA, 7SK Small Nuclear Pseudogene 264) is a Pseudogene, and is affiliated with the lncRNA class.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP264 Gene
Genomics for RN7SKP264 Gene
Regulatory Elements for RN7SKP264 Gene
Enhancers for RN7SKP264 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH09G086280 | 1.1 | ENCODE | 11.2 | -23.7 | -23714 | 2.8 | HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 | C9orf153 GAS1RR RN7SKP264 GAS1 ZCCHC6 ISCA1 |
| GH09G086349 | 1.1 | ENCODE | 10 | -94.4 | -94436 | 6.2 | HDGF PKNOX1 CREB3L1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 | C9orf153 RN7SKP264 LOC389765 ZCCHC6 GC09M086340 |
| GH09G086062 | 1 | Ensembl ENCODE | 9.6 | +195.3 | 195302 | 1.7 | ZNF263 ELF3 ZNF621 ZFP64 KLF17 CEBPB NFXL1 SALL2 ZNF398 EP300 | GOLM1 C9orf153 RN7SKP264 GC09M086071 PIR41548 |
| GH09G086187 | 0.6 | ENCODE | 10.6 | +71.3 | 71326 | 0.3 | CTCF ZNF654 RFX1 NFIA RAD21 ZIC2 | C9orf153 RN7SKP264 GC09P086188 GC09P086155 |
| GH09G086181 | 0.6 | ENCODE | 10.6 | +76.8 | 76825 | 1.2 | CBX3 CHD7 ZNF664 JUND ZFHX2 HDAC2 KLF16 POU5F1 PRDM1 | RN7SKP264 C9orf153 GC09P086188 GC09P086155 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around RN7SKP264 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for RN7SKP264 Gene
- Chromosome:
- 9
- Start:
- 86,258,358 bp from pter
- End:
- 86,258,646 bp from pter
- Size:
- 289 bases
- Orientation:
- Minus strand
Genomic View for RN7SKP264 Gene
Genes around RN7SKP264 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 9q21.33 by Ensembl
- 9q21.33 by Entrez Gene
- 9q21.33 by HGNC
RN7SKP264 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RN7SKP264 Gene
Proteins for RN7SKP264 Gene
Post-translational modifications for RN7SKP264 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for RN7SKP264
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RN7SKP264
- Origene Custom Protein Services for RN7SKP264
- Search GeneTex for Proteins for RN7SKP264
No data available for DME Specific Peptides for RN7SKP264 Gene
Domains & Families for RN7SKP264 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SKP264 Gene
Function for RN7SKP264 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for RN7SKP264
-
- Search ViGene Biosciences for RN7SKP264
CRISPR Products
- Browse CRISPR knockouts for RN7SKP264
miRNA Products
- Search ViGene Biosciences for RN7SKP264
Inhibitory RNA Products
- Search ViGene Biosciences for RN7SKP264
Clone Products
- GenScript: Custom all cDNA clones Services for RN7SKP264
- VectorBuilder custom plasmid, inducible vectors for RN7SKP264
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RN7SKP264
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP264 Gene
Localization for RN7SKP264 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SKP264 Gene
Transcripts for RN7SKP264 Gene
mRNA/cDNA for RN7SKP264 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for RN7SKP264
miRNA Products
- Search ViGene Biosciences for RN7SKP264
Inhibitory RNA Products
- Search ViGene Biosciences for RN7SKP264
Clone Products
- GenScript: Custom all cDNA clones Services for RN7SKP264
- VectorBuilder custom plasmid, inducible vectors for RN7SKP264
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RN7SKP264
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for RN7SKP264 Gene
mRNA differential expression in normal tissues according to GTEx for RN7SKP264 Gene
This gene is overexpressed in Testis (x53.0).
NURSA nuclear receptor signaling pathways regulating expression of RN7SKP264 Gene:
RN7SKP264
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SKP264 Gene
Orthologs for RN7SKP264 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | 7SK 35 |
|
OneToOne | |
| cow (Bos Taurus) |
Mammalia | 7SK 35 |
|
ManyToMany | |
| mouse (Mus musculus) |
Mammalia | Gm23250 35 |
|
ManyToMany | |
| lizard (Anolis carolinensis) |
Reptilia | 7SK 35 |
|
OneToOne | |
| sea squirt (Ciona savignyi) |
Ascidiacea | 7SK 35 35 35 |
|
ManyToMany |
- Species where no ortholog for RN7SKP264 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- dog (Canis familiaris)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Paralogs for RN7SKP264 Gene
No data available for Paralogs for RN7SKP264 Gene
Variants for RN7SKP264 Gene
Relevant External Links for RN7SKP264 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RN7SKP264
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP264 Gene
Disorders for RN7SKP264 Gene
No disorders were found for RN7SKP264 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP264 Gene
Publications for RN7SKP264 Gene
No publications were found for RN7SKP264 Gene.
Products for RN7SKP264 Gene
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- Browse CRISPR knockouts for RN7SKP264
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- Novus Biologicals
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- Search GeneTex for Antibodies for RN7SKP264
- Search GeneTex for Proteins for RN7SKP264
- Search ViGene Biosciences for RN7SKP264
- Cyagen custom Knockout/knockin (KOKI) mouse models for RN7SKP264
- VectorBuilder custom plasmid, inducible vectors for RN7SKP264
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RN7SKP264
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for RN7SKP264 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
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- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer