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Aliases for RN7SKP263 Gene

Subcategory (RNA class) for RN7SKP263 Gene

lncRNA

Aliases for RN7SKP263 Gene

  • RNA, 7SK Small Nuclear Pseudogene 263 2 3 5

External Ids for RN7SKP263 Gene

ORGUL Members for RN7SKP263 Gene

Previous GeneCards Identifiers for RN7SKP263 Gene

  • GC12M094404

Summaries for RN7SKP263 Gene

GeneCards Summary for RN7SKP263 Gene

RN7SKP263 (RNA, 7SK Small Nuclear Pseudogene 263) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP263 Gene

Genomics for RN7SKP263 Gene

Regulatory Elements for RN7SKP263 Gene

Enhancers for RN7SKP263 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G093990 1 Ensembl ENCODE 0.4 +17.5 17453 1.7 CTCF MXI1 ARID4B ZNF644 ZNF48 RAD21 TEAD3 CBX5 NFE2 CREM SOCS2 RN7SKP263 ENSG00000271382
GH12G094007 0.5 ENCODE 0.7 +1.1 1068 0.6 RB1 CREB3L1 NR4A1 ZBTB7B RN7SKP263 ENSG00000271382
GH12G094010 0.4 ENCODE 0.7 -1.4 -1440 0.5 POLR2A RBBP5 LOC105369912 RN7SKP263
GH12G093982 0.9 Ensembl ENCODE 0.3 +25.9 25880 1.4 L3MBTL2 BHLHE40 MNT ZIC2 EP300 FOSL1 JUND GATA3 FOS FOSL2 SOCS2 RN7SKP263 ENSG00000271382
GH12G093978 0.7 ENCODE 0.3 +30.2 30198 0.2 PKNOX1 ASH2L CEBPG RBBP5 FOSL1 ZNF316 SCRT2 ETV6 FOS NFE2 SOCS2 RN7SKP263 ENSG00000271382
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SKP263 on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SKP263 Gene

Chromosome:
12
Start:
94,008,739 bp from pter
End:
94,009,047 bp from pter
Size:
309 bases
Orientation:
Minus strand

Genomic View for RN7SKP263 Gene

Genes around RN7SKP263 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP263 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP263 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP263 Gene

Proteins for RN7SKP263 Gene

Post-translational modifications for RN7SKP263 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SKP263 Gene

Domains & Families for RN7SKP263 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SKP263 Gene

Function for RN7SKP263 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP263 Gene

Localization for RN7SKP263 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SKP263 Gene

Pathways & Interactions for RN7SKP263 Gene

SuperPathways for RN7SKP263 Gene

No Data Available

Interacting Proteins for RN7SKP263 Gene

Gene Ontology (GO) - Biological Process for RN7SKP263 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SKP263 Gene

Drugs & Compounds for RN7SKP263 Gene

No Compound Related Data Available

Transcripts for RN7SKP263 Gene

mRNA/cDNA for RN7SKP263 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP263 Gene

No ASD Table

Relevant External Links for RN7SKP263 Gene

GeneLoc Exon Structure for
RN7SKP263
ECgene alternative splicing isoforms for
RN7SKP263

Expression for RN7SKP263 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SKP263 Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP263 Gene:

RN7SKP263
genes like me logo Genes that share expression patterns with RN7SKP263: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SKP263 Gene

Orthologs for RN7SKP263 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SKP263 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 7SK 35
  • 99 (a)
OneToOne
Species where no ortholog for RN7SKP263 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SKP263 Gene

ENSEMBL:
Gene Tree for RN7SKP263 (if available)
TreeFam:
Gene Tree for RN7SKP263 (if available)

Paralogs for RN7SKP263 Gene

No data available for Paralogs for RN7SKP263 Gene

Variants for RN7SKP263 Gene

Relevant External Links for RN7SKP263 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP263

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP263 Gene

Disorders for RN7SKP263 Gene

No disorders were found for RN7SKP263 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP263 Gene

Publications for RN7SKP263 Gene

No publications were found for RN7SKP263 Gene.

Products for RN7SKP263 Gene

Sources for RN7SKP263 Gene

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