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Aliases for RN7SKP26 Gene

Subcategory (RNA class) for RN7SKP26 Gene

lncRNA

Aliases for RN7SKP26 Gene

  • RNA, 7SK Small Nuclear Pseudogene 26 2 3 5

External Ids for RN7SKP26 Gene

ORGUL Members for RN7SKP26 Gene

Previous GeneCards Identifiers for RN7SKP26 Gene

  • GC18M043571

Summaries for RN7SKP26 Gene

GeneCards Summary for RN7SKP26 Gene

RN7SKP26 (RNA, 7SK Small Nuclear Pseudogene 26) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP26 Gene

Genomics for RN7SKP26 Gene

Regulatory Elements for RN7SKP26 Gene

Enhancers for RN7SKP26 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18F046096 1 ENCODE 12.2 -107.9 -107903 2.9 PKNOX1 CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF48 YY1 SLC30A9 HAUS1 ATP5A1 RNY4P37 PSTPIP2 RN7SKP26 EPG5 GC18P046096
GH18F045993 0.9 Ensembl ENCODE 0.8 -3.9 -3877 1.6 JUN CEBPB MNT EP300 RFX5 GATA3 JUND FOS EPG5 RN7SKP26 LOC100422497
GH18F045997 1.2 FANTOM5 Ensembl ENCODE 0.4 -8.6 -8551 2.3 SRF HDAC1 TAL1 ARID1B NCOR1 GATA2 ELK1 KLF16 IKZF1 FOXJ2 EPG5 HAUS1 SLC14A2 RNF165 RN7SKP26 LOC100422497
GH18F045973 1.5 FANTOM5 Ensembl ENCODE 0.3 +15.5 15545 1.2 ELF3 CTCF ESRRA ZNF384 RAD21 RFX5 TEAD3 SLC30A9 STAT2 ZNF143 EPG5 PSTPIP2 RN7SKP26
GH18F046008 1.1 FANTOM5 Ensembl ENCODE 0.3 -19.5 -19544 1.8 ARID1B NCOR1 NR2F1 TAL1 NR2F6 PSTPIP2 EPG5 RNY4P37 SLC14A2 LOC100422497 RN7SKP26
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SKP26 on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SKP26 Gene

Chromosome:
18
Start:
45,989,653 bp from pter
End:
45,989,945 bp from pter
Size:
293 bases
Orientation:
Minus strand

Genomic View for RN7SKP26 Gene

Genes around RN7SKP26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP26 Gene

Proteins for RN7SKP26 Gene

Post-translational modifications for RN7SKP26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SKP26 Gene

Domains & Families for RN7SKP26 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SKP26 Gene

Function for RN7SKP26 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP26 Gene

Localization for RN7SKP26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SKP26 Gene

Pathways & Interactions for RN7SKP26 Gene

SuperPathways for RN7SKP26 Gene

No Data Available

Interacting Proteins for RN7SKP26 Gene

Gene Ontology (GO) - Biological Process for RN7SKP26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SKP26 Gene

Transcripts for RN7SKP26 Gene

mRNA/cDNA for RN7SKP26 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP26 Gene

No ASD Table

Relevant External Links for RN7SKP26 Gene

GeneLoc Exon Structure for
RN7SKP26
ECgene alternative splicing isoforms for
RN7SKP26

Expression for RN7SKP26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SKP26 Gene

mRNA differential expression in normal tissues according to GTEx for RN7SKP26 Gene

This gene is overexpressed in Whole Blood (x10.5) and Spleen (x7.0).

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP26 Gene:

RN7SKP26
genes like me logo Genes that share expression patterns with RN7SKP26: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RN7SKP26 Gene

Orthologs for RN7SKP26 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SKP26 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 7SK 35
  • 83 (a)
OneToOne
Species where no ortholog for RN7SKP26 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SKP26 Gene

ENSEMBL:
Gene Tree for RN7SKP26 (if available)
TreeFam:
Gene Tree for RN7SKP26 (if available)

Paralogs for RN7SKP26 Gene

No data available for Paralogs for RN7SKP26 Gene

Variants for RN7SKP26 Gene

Relevant External Links for RN7SKP26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP26 Gene

Disorders for RN7SKP26 Gene

No disorders were found for RN7SKP26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP26 Gene

Publications for RN7SKP26 Gene

No publications were found for RN7SKP26 Gene.

Products for RN7SKP26 Gene

Sources for RN7SKP26 Gene

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