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Aliases for RN7SKP23 Gene

Subcategory (RNA class) for RN7SKP23 Gene

antisense

Aliases for RN7SKP23 Gene

  • RNA, 7SK Small Nuclear Pseudogene 23 2 3 5

External Ids for RN7SKP23 Gene

ORGUL Members for RN7SKP23 Gene

Previous GeneCards Identifiers for RN7SKP23 Gene

  • GC16M023425
  • GC00U936252

Summaries for RN7SKP23 Gene

GeneCards Summary for RN7SKP23 Gene

RN7SKP23 (RNA, 7SK Small Nuclear Pseudogene 23) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP23 Gene

Genomics for RN7SKP23 Gene

Regulatory Elements for RN7SKP23 Gene

Enhancers for RN7SKP23 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F023408 0.9 FANTOM5 ENCODE 0.8 -3.4 -3366 1.2 INSM2 ZNF76 KLF17 FEZF1 ZNF2 ZEB1 ZNF366 GATA2 SCRT2 ZNF391 DCTN5 RN7SKP23 GC16M023275
GH16F023410 0.2 ENCODE 0.8 -2.0 -2026 0.1 SCRT1 SCRT2 FEZF1 NR3C1 ZIC2 SCNN1B RN7SKP23 GC16M023275
GH16F023403 0.4 ENCODE 0.4 -8.7 -8675 1.1 PKNOX1 NFIA GFI1B FEZF1 ZNF121 GATA3 SMARCA4 POLR2A PRDM1 MAFK COG7 GGA2 RN7SKP23 GC16M023275
GH16F023398 1.1 Ensembl ENCODE 0.4 -13.3 -13296 1.6 SCRT1 CTCF SCRT2 FEZF1 ZIC2 DCTN5 UBFD1 RN7SKP23 GC16M023275
GH16F023392 0.5 ENCODE 0.3 -19.0 -19024 1.3 PKNOX1 NFIA GFI1B FEZF1 OSR2 GATA3 SCRT2 ZXDB TRIM28 ZNF18 DCTN5 RN7SKP23 GC16M023275
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RN7SKP23 on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SKP23 Gene

Chromosome:
16
Start:
23,412,380 bp from pter
End:
23,416,680 bp from pter
Size:
4,301 bases
Orientation:
Plus strand

Genomic View for RN7SKP23 Gene

Genes around RN7SKP23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP23 Gene

Proteins for RN7SKP23 Gene

Post-translational modifications for RN7SKP23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SKP23 Gene

Domains & Families for RN7SKP23 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SKP23 Gene

Function for RN7SKP23 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP23 Gene

Localization for RN7SKP23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SKP23 Gene

Pathways & Interactions for RN7SKP23 Gene

SuperPathways for RN7SKP23 Gene

No Data Available

Interacting Proteins for RN7SKP23 Gene

Gene Ontology (GO) - Biological Process for RN7SKP23 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SKP23 Gene

Transcripts for RN7SKP23 Gene

mRNA/cDNA for RN7SKP23 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP23 Gene

No ASD Table

Relevant External Links for RN7SKP23 Gene

GeneLoc Exon Structure for
RN7SKP23
ECgene alternative splicing isoforms for
RN7SKP23

Expression for RN7SKP23 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SKP23 Gene

mRNA differential expression in normal tissues according to GTEx for RN7SKP23 Gene

This gene is overexpressed in Brain - Cerebellum (x6.9) and Brain - Cerebellar Hemisphere (x6.4).

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP23 Gene:

RN7SKP23
genes like me logo Genes that share expression patterns with RN7SKP23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RN7SKP23 Gene

Orthologs for RN7SKP23 Gene

Evolution for RN7SKP23 Gene

ENSEMBL:
Gene Tree for RN7SKP23 (if available)
TreeFam:
Gene Tree for RN7SKP23 (if available)

No data available for Orthologs for RN7SKP23 Gene

Paralogs for RN7SKP23 Gene

No data available for Paralogs for RN7SKP23 Gene

Variants for RN7SKP23 Gene

Relevant External Links for RN7SKP23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP23 Gene

Disorders for RN7SKP23 Gene

Relevant External Links for RN7SKP23

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RN7SKP23

No disorders were found for RN7SKP23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RN7SKP23 Gene

Publications for RN7SKP23 Gene

No publications were found for RN7SKP23 Gene.

Products for RN7SKP23 Gene

Sources for RN7SKP23 Gene

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