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Aliases for RN7SKP198 Gene

Subcategory (RNA class) for RN7SKP198 Gene

antisense

Aliases for RN7SKP198 Gene

  • RNA, 7SK Small Nuclear Pseudogene 198 2 3 5

External Ids for RN7SKP198 Gene

ORGUL Members for RN7SKP198 Gene

Previous GeneCards Identifiers for RN7SKP198 Gene

  • GC07P102501

Summaries for RN7SKP198 Gene

GeneCards Summary for RN7SKP198 Gene

RN7SKP198 (RNA, 7SK Small Nuclear Pseudogene 198) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RN7SKP198 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP198 Gene

Genomics for RN7SKP198 Gene

Regulatory Elements for RN7SKP198 Gene

Enhancers for RN7SKP198 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H102859 1.4 Ensembl ENCODE dbSUPER 0.7 +2.7 2736 2 ELF3 FOXA2 RAD21 THRB RARA FOS RCOR1 MIXL1 SP5 PPARG LRWD1 RN7SKP198 LRRC17
GH07H102870 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.5 16544 6 PKNOX1 FOXA2 SIN3A ATF7 FOS RUNX3 JUNB PPARG ZNF592 NFIL3 LRRC17 CRYZP1 FAM185A ENSG00000213385 POLR2J3 UPK3BL1 ARMC10 ORAI2 LRWD1 RN7SKP198
GH07H102889 1.3 Ensembl ENCODE dbSUPER 0.3 +34.1 34131 3 HDAC1 PKNOX1 ATF1 JUN CEBPG ZBTB40 FOSL1 GATA2 POLR2A FOS LRRC17 LRWD1 ORAI2 ARMC10 RN7SKP198
GH07H102834 1.1 Ensembl ENCODE 0.3 -21.3 -21262 3 TBL1XR1 SIN3A BATF ZNF366 FOS ATF7 ETV6 RUNX3 CREM IKZF2 RPL23AP95 POLR2J3 UPK3BL1 RASA4DP LRWD1 ARMC10 RNU6-1136P RN7SKP198
GH07H102838 0.8 ENCODE 0.4 -18.8 -18773 1 ELF3 FOXA2 MLX RARA MIXL1 SP5 PPARG KAT8 NFIL3 MIER3 DPY19L2P2 LRWD1 RNU6-1136P RN7SKP198
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SKP198 on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SKP198 Gene

Chromosome:
7
Start:
102,857,450 bp from pter
End:
102,857,755 bp from pter
Size:
306 bases
Orientation:
Plus strand

Genomic View for RN7SKP198 Gene

Genes around RN7SKP198 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP198 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP198 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP198 Gene

Proteins for RN7SKP198 Gene

Post-translational modifications for RN7SKP198 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SKP198 Gene

Domains & Families for RN7SKP198 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SKP198 Gene

Function for RN7SKP198 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP198 Gene

Localization for RN7SKP198 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SKP198 Gene

Pathways & Interactions for RN7SKP198 Gene

SuperPathways for RN7SKP198 Gene

No Data Available

Interacting Proteins for RN7SKP198 Gene

Gene Ontology (GO) - Biological Process for RN7SKP198 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SKP198 Gene

Drugs & Compounds for RN7SKP198 Gene

No Compound Related Data Available

Transcripts for RN7SKP198 Gene

mRNA/cDNA for RN7SKP198 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP198 Gene

No ASD Table

Relevant External Links for RN7SKP198 Gene

GeneLoc Exon Structure for
RN7SKP198
ECgene alternative splicing isoforms for
RN7SKP198

Expression for RN7SKP198 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SKP198 Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP198 Gene:

RN7SKP198
genes like me logo Genes that share expression patterns with RN7SKP198: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SKP198 Gene

Orthologs for RN7SKP198 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RN7SKP198 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 7SK 34
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 7SK 34
  • 60 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm23657 34
  • 55 (a)
ManyToMany
Species where no ortholog for RN7SKP198 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SKP198 Gene

ENSEMBL:
Gene Tree for RN7SKP198 (if available)
TreeFam:
Gene Tree for RN7SKP198 (if available)

Paralogs for RN7SKP198 Gene

No data available for Paralogs for RN7SKP198 Gene

Variants for RN7SKP198 Gene

Relevant External Links for RN7SKP198 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP198

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP198 Gene

Disorders for RN7SKP198 Gene

No disorders were found for RN7SKP198 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP198 Gene

Publications for RN7SKP198 Gene

No publications were found for RN7SKP198 Gene.

Products for RN7SKP198 Gene

Sources for RN7SKP198 Gene

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