Aliases for RN7SKP191 Gene
Subcategory (RNA class) for RN7SKP191 Gene
External Ids for RN7SKP191 Gene
- HGNC: 45915
- Entrez Gene: 106480471
- Ensembl: ENSG00000201583
ORGUL Members for RN7SKP191 Gene
Previous GeneCards Identifiers for RN7SKP191 Gene
- GC09P107862
Summaries for RN7SKP191 Gene
GeneCards Summary for RN7SKP191 Gene
RN7SKP191 (RNA, 7SK Small Nuclear Pseudogene 191) is a Pseudogene, and is affiliated with the 7SK RNA class.
fRNAdb sequence ontologies for RN7SKP191 Gene - the ORGUL cluster for this gene includes several descriptions:
-
snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.
-
7SK RNA: 7SK was discovered as an abundant small nuclear RNA in the mid-70s but a possible function has only recently been suggested [1]. Two independent studies have found that 7SK RNA binds the CDK9/cyclin T complex (known as elongation factor P-TEFb). P-TEFb activates transcription by phosphorylating the C-terminal domain of RNA polymerase II. This process is negatively regulated by the 7SK RNP. The secondary structure of 7SK RNA shown here was proposed by Wasserman and Steitz on the basis of chemical modification and enzymatic cleavage experiments [2]. This family contains a number of annotated pseudogenes and 7SK derived repeats. The threshold is artificially high to minimise the pseudogene count.
Additional gene information for RN7SKP191 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RN7SKP191 Gene
Genomics for RN7SKP191 Gene
GeneHancer (GH) Regulatory Elements for RN7SKP191 Gene
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH09I105126 | Enhancer | 1.3 | FANTOM5 Ensembl ENCODE dbSUPER | 0.3 | +30.7 | 30682 | 2.4 | SRF TEAD1 CEBPB CEBPG GABPA TEAD3 BCL11A POLR2A IKZF1 CEBPA | ABCA1 RN7SKP191 LOC105376197 GC09P105218 | |
GH09I105114 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | +19.3 | 19274 | 2.5 | FOXA2 USF1 MAX RAD21 RARA YY1 POLR2A HNF4G RXRA NR2F2 | ABCA1 LOC105376196 RN7SKP191 LOC105376197 GC09P105218 | |
GH09I105191 | Enhancer | 1.4 | FANTOM5 Ensembl ENCODE | 0.2 | +95.1 | 95083 | 1.3 | FOXA2 ARID4B SIN3A DMAP1 YY1 SLC30A9 ATF7 RUNX3 RXRA JUNB | ABCA1 FSD1L GC09P105218 RN7SKP191 | |
GH09I105141 | Enhancer | 1.1 | FANTOM5 Ensembl ENCODE dbSUPER | 0.2 | +45.3 | 45259 | 2 | HLF NFE2 SPI1 | ABCA1 RN7SKP191 LOC105376197 GC09P105218 | |
GH09I105156 | Enhancer | 1.1 | Ensembl ENCODE dbSUPER | 0.2 | +60.4 | 60395 | 0.9 | CTCF PKNOX1 ZBTB6 SAP130 RAD21 SMC3 RCOR1 ZNF600 CHD2 THAP11 | RN7SKP191 GC09P105218 |
Regulatory Element Products
Genomic Locations for RN7SKP191 Gene
- chr9:105,096,756-105,097,061
- (GRCh38/hg38)
- Size:
- 306 bases
- Orientation:
- Plus strand
- chr9:107,859,037-107,859,342
- (GRCh37/hg19)
Genomic View for RN7SKP191 Gene
- Cytogenetic band:
-
- 9q31.1 by Ensembl
- 9q31.1 by Entrez Gene
- 9q31.1 by HGNC


RefSeq DNA sequence for RN7SKP191 Gene
ORGUL Member Location for RN7SKP191 Gene

Proteins for RN7SKP191 Gene
Post-translational modifications for RN7SKP191 Gene
Antibody Products
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Protein Products
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No data available for DME Specific Peptides for RN7SKP191 Gene
Domains & Families for RN7SKP191 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SKP191 Gene
Function for RN7SKP191 Gene
Animal Model Products
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-
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CRISPR Products
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miRNA Products
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Clone Products
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-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP191 Gene
Localization for RN7SKP191 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SKP191 Gene
Transcripts for RN7SKP191 Gene
mRNA/cDNA for RN7SKP191 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for RN7SKP191
miRNA Products
- Search ViGene Biosciences for RN7SKP191
Inhibitory RNA Products
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Clone Products
- GenScript: Custom all cDNA clones Services for RN7SKP191
- VectorBuilder custom plasmid, inducible vectors for RN7SKP191
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RN7SKP191
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for RN7SKP191 Gene
NURSA nuclear receptor signaling pathways regulating expression of RN7SKP191 Gene:
RN7SKP191Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SKP191 Gene
Orthologs for RN7SKP191 Gene
This gene was present in the common ancestor of chordates.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
chimpanzee (Pan troglodytes) |
Mammalia | 7SK 34 |
|
OneToOne | |
cow (Bos Taurus) |
Mammalia | 7SK 34 |
|
OneToOne | |
mouse (Mus musculus) |
Mammalia | Gm24140 34 |
|
ManyToMany | |
lizard (Anolis carolinensis) |
Reptilia | 7SK 34 |
|
ManyToMany |
- Species where no ortholog for RN7SKP191 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- dog (Canis familiaris)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Paralogs for RN7SKP191 Gene
No data available for Paralogs for RN7SKP191 Gene
Variants for RN7SKP191 Gene
Additional Variant Information for RN7SKP191 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RN7SKP191
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP191 Gene
Disorders for RN7SKP191 Gene
No disorders were found for RN7SKP191 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP191 Gene
Publications for RN7SKP191 Gene
- Transcription: surprising role for an elusive small nuclear RNA. (PMID: 11864590) Blencowe BJ (Current biology : CB 2002) 1
- Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function. (PMID: 1646389) Wassarman DA … Steitz JA (Molecular and cellular biology 1991) 1
Products for RN7SKP191 Gene
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- Cyagen custom Knockout/knockin (KOKI) mouse models for RN7SKP191
- VectorBuilder custom plasmid, inducible vectors for RN7SKP191
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RN7SKP191
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for RN7SKP191
- Search GeneTex for Proteins for RN7SKP191
Sources for RN7SKP191 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
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- (18) KEGG
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- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
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- (91) Illumina
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- (96) Addgene
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- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
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- (108) SCBT
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- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew