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Aliases for RN7SKP155 Gene

Subcategory (RNA class) for RN7SKP155 Gene


Aliases for RN7SKP155 Gene

  • RNA, 7SK Small Nuclear Pseudogene 155 2 3 5

External Ids for RN7SKP155 Gene

ORGUL Members for RN7SKP155 Gene

Previous GeneCards Identifiers for RN7SKP155 Gene

  • GC08P124601

Summaries for RN7SKP155 Gene

GeneCards Summary for RN7SKP155 Gene

RN7SKP155 (RNA, 7SK Small Nuclear Pseudogene 155) is a Pseudogene, and is affiliated with the 7SK RNA class.

fRNAdb sequence ontologies for RN7SKP155 Gene

  • 7SK RNA: 7SK was discovered as an abundant small nuclear RNA in the mid-70s but a possible function has only recently been suggested [1]. Two independent studies have found that 7SK RNA binds the CDK9/cyclin T complex (known as elongation factor P-TEFb). P-TEFb activates transcription by phosphorylating the C-terminal domain of RNA polymerase II. This process is negatively regulated by the 7SK RNP. The secondary structure of 7SK RNA shown here was proposed by Wasserman and Steitz on the basis of chemical modification and enzymatic cleavage experiments [2]. This family contains a number of annotated pseudogenes and 7SK derived repeats. The threshold is artificially high to minimise the pseudogene count.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RN7SKP155 Gene

Genomics for RN7SKP155 Gene

Regulatory Elements for RN7SKP155 Gene

Enhancers for RN7SKP155 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F123592 1.1 Ensembl ENCODE 0.8 +3.9 3867 1.1 HDAC1 PKNOX1 ATF1 TBL1XR1 NFRKB CREM CBFB JUNB CEBPB ZNF589 LOC105375738 KLHL38 FBXO32 GC08P123594 RN7SKP155
GH08F123589 1.1 Ensembl ENCODE 0.8 +1.5 1547 2.6 ESRRA JUN RAD21 YY1 POLR2A NCOR1 ZNF157 HNF4G NFE2 TRIM24 LOC105375738 KLHL38 FBXO32 GC08P123594 RN7SKP155
GH08F123585 0.6 ENCODE 0.8 -2.7 -2658 0.6 CTCF JUND BHLHE40 IKZF1 CEBPG FOXP2 RAD21 LOC105375738 KLHL38 FBXO32 RN7SKP155 ENSG00000254113
GH08F123579 1.2 Ensembl ENCODE 0.4 -7.9 -7902 2.1 ZFP64 ARID4B ZNF48 ZNF143 FOS DEK JUNB REST TBX21 MYNN LOC105375738 KLHL38 ANXA13 FBXO32 ATAD2 WDYHV1 RN7SKP155 ENSG00000254113
GH08F123573 0.6 ENCODE 0.4 -14.2 -14198 1.6 BCOR IKZF1 ZMYM3 TBX21 SPI1 KLHL38 FBXO32 ENSG00000254113 RN7SKP155
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SKP155 on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SKP155 Gene

123,588,759 bp from pter
123,589,046 bp from pter
288 bases
Plus strand

Genomic View for RN7SKP155 Gene

Genes around RN7SKP155 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP155 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP155 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP155 Gene

Proteins for RN7SKP155 Gene

Post-translational modifications for RN7SKP155 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SKP155 Gene

Domains & Families for RN7SKP155 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SKP155 Gene

Function for RN7SKP155 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP155 Gene

Localization for RN7SKP155 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SKP155 Gene

Pathways & Interactions for RN7SKP155 Gene

SuperPathways for RN7SKP155 Gene

No Data Available

Interacting Proteins for RN7SKP155 Gene

Gene Ontology (GO) - Biological Process for RN7SKP155 Gene


No data available for Pathways by source and SIGNOR curated interactions for RN7SKP155 Gene

Transcripts for RN7SKP155 Gene

mRNA/cDNA for RN7SKP155 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP155 Gene

No ASD Table

Relevant External Links for RN7SKP155 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RN7SKP155 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SKP155 Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP155 Gene:

genes like me logo Genes that share expression patterns with RN7SKP155: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RN7SKP155 Gene

Orthologs for RN7SKP155 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RN7SKP155 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia 7SK 35
  • 55 (a)
(Mus musculus)
Mammalia Gm25103 35
  • 43 (a)
(Canis familiaris)
Mammalia 7SK 35
  • 38 (a)
(Monodelphis domestica)
Mammalia 7SK 35
  • 36 (a)
(Danio rerio)
Actinopterygii 7SK 35
  • 38 (a)
Species where no ortholog for RN7SKP155 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RN7SKP155 Gene

Gene Tree for RN7SKP155 (if available)
Gene Tree for RN7SKP155 (if available)

Paralogs for RN7SKP155 Gene

No data available for Paralogs for RN7SKP155 Gene

Variants for RN7SKP155 Gene

Relevant External Links for RN7SKP155 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP155 Gene

Disorders for RN7SKP155 Gene

No disorders were found for RN7SKP155 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP155 Gene

Publications for RN7SKP155 Gene

No publications were found for RN7SKP155 Gene.

Products for RN7SKP155 Gene

Sources for RN7SKP155 Gene

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