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Aliases for RN7SKP151 Gene

Subcategory (RNA class) for RN7SKP151 Gene

lncRNA

Aliases for RN7SKP151 Gene

  • RNA, 7SK Small Nuclear Pseudogene 151 2 3 5

External Ids for RN7SKP151 Gene

ORGUL Members for RN7SKP151 Gene

Summaries for RN7SKP151 Gene

GeneCards Summary for RN7SKP151 Gene

RN7SKP151 (RNA, 7SK Small Nuclear Pseudogene 151) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP151 Gene

Genomics for RN7SKP151 Gene

Regulatory Elements for RN7SKP151 Gene

Enhancers for RN7SKP151 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G013337 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -14.2 -14239 2.9 TBP SIN3A RAD21 RFX5 YY1 SCRT2 RCOR1 FOS RELB ETV6 ARNTL GC11P013334 RN7SKP151
GH11G013335 1.2 Ensembl ENCODE dbSUPER 0.4 -17.8 -17807 0.4 HDGF CTCF ZNF654 PKNOX1 TEAD4 TRIM22 CHD1 CEBPB RAD21 TEAD3 ARNTL GC11P013334 RN7SKP151
GH11G013336 1.1 Ensembl ENCODE dbSUPER 0.4 -16.6 -16575 1.0 POLR2A CHD1 NR3C1 EBF1 EP300 RAD21 ARNTL GC11P013334 RN7SKP151
GH11G013347 0.6 dbSUPER 0.7 -4.8 -4839 1.3 HDGF ZFHX2 EED IKZF1 SPI1 RELA ARNTL RN7SKP151 GC11P013334
GH11G013344 0.7 ENCODE 0.4 -8.9 -8880 0.2 HDGF CTCF ZNF654 ZNF362 TRIM22 MNT REST RAD21 FOXA1 JUND RN7SKP151 GC11P013334
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SKP151 on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SKP151 Gene

Chromosome:
11
Start:
13,353,208 bp from pter
End:
13,353,523 bp from pter
Size:
316 bases
Orientation:
Plus strand

Genomic View for RN7SKP151 Gene

Genes around RN7SKP151 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP151 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP151 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP151 Gene

Proteins for RN7SKP151 Gene

Post-translational modifications for RN7SKP151 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SKP151 Gene

Domains & Families for RN7SKP151 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SKP151 Gene

Function for RN7SKP151 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP151 Gene

Localization for RN7SKP151 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SKP151 Gene

Pathways & Interactions for RN7SKP151 Gene

SuperPathways for RN7SKP151 Gene

No Data Available

Interacting Proteins for RN7SKP151 Gene

Gene Ontology (GO) - Biological Process for RN7SKP151 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SKP151 Gene

Drugs & Compounds for RN7SKP151 Gene

No Compound Related Data Available

Transcripts for RN7SKP151 Gene

mRNA/cDNA for RN7SKP151 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP151 Gene

No ASD Table

Relevant External Links for RN7SKP151 Gene

GeneLoc Exon Structure for
RN7SKP151
ECgene alternative splicing isoforms for
RN7SKP151

Expression for RN7SKP151 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SKP151 Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP151 Gene:

RN7SKP151
genes like me logo Genes that share expression patterns with RN7SKP151: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SKP151 Gene

Orthologs for RN7SKP151 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RN7SKP151 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 7SK 35
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 7SK 35
  • 70 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm25545 35
  • 64 (a)
ManyToMany
Species where no ortholog for RN7SKP151 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SKP151 Gene

ENSEMBL:
Gene Tree for RN7SKP151 (if available)
TreeFam:
Gene Tree for RN7SKP151 (if available)

Paralogs for RN7SKP151 Gene

No data available for Paralogs for RN7SKP151 Gene

Variants for RN7SKP151 Gene

Relevant External Links for RN7SKP151 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP151

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP151 Gene

Disorders for RN7SKP151 Gene

No disorders were found for RN7SKP151 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP151 Gene

Publications for RN7SKP151 Gene

No publications were found for RN7SKP151 Gene.

Products for RN7SKP151 Gene

Sources for RN7SKP151 Gene

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