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Aliases for RIBC1 Gene

Aliases for RIBC1 Gene

  • RIB43A Domain With Coiled-Coils 1 2 3
  • RIB43A-Like With Coiled-Coils Protein 1 3
  • 2610028I09Rik 3

External Ids for RIBC1 Gene

Previous GeneCards Identifiers for RIBC1 Gene

  • GC0XP053332
  • GC0XP053466
  • GC0XP050507

Summaries for RIBC1 Gene

GeneCards Summary for RIBC1 Gene

RIBC1 (RIB43A Domain With Coiled-Coils 1) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RIBC1 Gene

Genomics for RIBC1 Gene

Regulatory Elements for RIBC1 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for RIBC1 Gene

53,422,690 bp from pter
53,431,120 bp from pter
8,431 bases
Plus strand

Genomic View for RIBC1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RIBC1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RIBC1 Gene

Proteins for RIBC1 Gene

  • Protein details for RIBC1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    RIB43A-like with coiled-coils protein 1
    Protein Accession:
    Secondary Accessions:
    • B4E297
    • E9PDU2
    • Q5H931
    • Q96A80

    Protein attributes for RIBC1 Gene

    379 amino acids
    Molecular mass:
    44015 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for RIBC1 Gene


neXtProt entry for RIBC1 Gene

Proteomics data for RIBC1 Gene at MOPED

Post-translational modifications for RIBC1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RIBC1 Gene

Antibody Products

  • Santa Cruz Biotechnology (SCBT) Antibodies for RIBC1

No data available for DME Specific Peptides for RIBC1 Gene

Domains for RIBC1 Gene

Protein Domains for RIBC1 Gene


Suggested Antigen Peptide Sequences for RIBC1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Q8N443
  • Belongs to the RIB43A family.
genes like me logo Genes that share domains with RIBC1: view

No data available for Gene Families for RIBC1 Gene

Function for RIBC1 Gene

Gene Ontology (GO) - Molecular Function for RIBC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with RIBC1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RIBC1 Gene

Localization for RIBC1 Gene

Subcellular locations from

Jensen Localization Image for RIBC1 Gene COMPARTMENTS Subcellular localization image for RIBC1 gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RIBC1 Gene

Pathways for RIBC1 Gene

SuperPathways for RIBC1 Gene

No Data Available

Interacting Proteins for RIBC1 Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
Selected Interacting proteins: ENSP00000364476 Q8N443-RIBC1_HUMAN for RIBC1 Gene via STRING UniProtKB I2D

Gene Ontology (GO) - Biological Process for RIBC1 Gene


No data available for Pathways by source for RIBC1 Gene

Transcripts for RIBC1 Gene

Unigene Clusters for RIBC1 Gene

RIB43A domain with coiled-coils 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RIBC1

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RIBC1 Gene

ExUns: 1 ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8a · 8b · 8c ^ 9a · 9b ^ 10 ^ 11
SP1: - - - -
SP2: - - - - - - -
SP3: - -
SP4: - - - -
SP5: - - -
SP6: -
SP7: - -

Relevant External Links for RIBC1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RIBC1 Gene

mRNA expression in normal human tissues for RIBC1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for RIBC1 Gene

This gene is overexpressed in Testis (16.3).

Protein differential expression in normal tissues for RIBC1 Gene

This gene is overexpressed in Heart (38.0) and Testis (31.0).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for RIBC1 Gene

SOURCE GeneReport for Unigene cluster for RIBC1 Gene Hs.351743

genes like me logo Genes that share expressions with RIBC1: view

Expression partners for RIBC1 Gene

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for RIBC1 Gene

Orthologs for RIBC1 Gene

This gene was present in the common ancestor of animals.

Orthologs for RIBC1 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia RIBC1 35
  • 80.39 (n)
  • 69.13 (a)
RIBC1 36
  • 69 (a)
(Canis familiaris)
Mammalia RIBC1 35
  • 81.97 (n)
  • 72.3 (a)
RIBC1 36
  • 72 (a)
(Mus musculus)
Mammalia Ribc1 35
  • 73.63 (n)
  • 66.4 (a)
Ribc1 16
Ribc1 36
  • 66 (a)
(Pan troglodytes)
Mammalia RIBC1 35
  • 99.47 (n)
  • 99.74 (a)
RIBC1 36
  • 100 (a)
(Rattus norvegicus)
Mammalia Ribc1 35
  • 74.62 (n)
  • 68.44 (a)
(Monodelphis domestica)
Mammalia RIBC1 36
  • 50 (a)
(Ornithorhynchus anatinus)
Mammalia RIBC1 36
  • 52 (a)
(Anolis carolinensis)
Reptilia RIBC1 36
  • 41 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia ribc1 35
  • 53.3 (n)
  • 41.95 (a)
(Danio rerio)
Actinopterygii ribc1 35
  • 48.4 (n)
  • 36.36 (a)
ribc1 36
  • 33 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG7264 36
  • 24 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 36 (a)
Species with no ortholog for RIBC1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RIBC1 Gene

Gene Tree for RIBC1 (if available)
Gene Tree for RIBC1 (if available)

Paralogs for RIBC1 Gene

Selected SIMAP similar genes for RIBC1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RIBC1: view

No data available for Paralogs for RIBC1 Gene

Variants for RIBC1 Gene

Sequence variations from dbSNP and Humsavar for RIBC1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs1264012 -- 53,427,432(+) CCAGC(C/T)GACAA intron-variant
rs1264013 -- 53,430,674(+) CAGAC(C/T)ATGAG reference, synonymous-codon
rs4830346 -- 53,426,126(+) cagag(A/C)tggag intron-variant
rs5978132 -- 53,426,253(+) TGGGC(C/T)ATTCC intron-variant
rs12392275 -- 53,426,435(+) GCCAC(C/T)TCACT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RIBC1 Gene

Variant ID Type Subtype PubMed ID
nsv435891 CNV Deletion 17901297
esv2740175 CNV Deletion 23290073
nsv6908 CNV Insertion 18451855

Relevant External Links for RIBC1 Gene

HapMap Linkage Disequilibrium report

PCR Panel Products

  • Copy Number PCR Panels: for RIBC1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RIBC1 Gene

Disorders for RIBC1 Gene

No disorders were found for RIBC1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for RIBC1 Gene

Publications for RIBC1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4
  4. Submicroscopic duplications of the hydroxysteroid dehydrogenase HSD17B10 and the E3 ubiquitin ligase HUWE1 are associated with mental retardation. (PMID: 18252223) Froyen G. … Gecz J. (Am. J. Hum. Genet. 2008) 3
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for RIBC1 Gene

Sources for RIBC1 Gene

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