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Aliases for RHOA-IT1 Gene

Subcategory (RNA class) for RHOA-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RHOA-IT1 Gene

  • RHOA Intronic Transcript 1 2 3 5
  • RHOA Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for RHOA-IT1 Gene

Previous GeneCards Identifiers for RHOA-IT1 Gene

  • GC00U933018

Summaries for RHOA-IT1 Gene

GeneCards Summary for RHOA-IT1 Gene

RHOA-IT1 (RHOA Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RHOA-IT1 Gene

Genomics for RHOA-IT1 Gene

Regulatory Elements for RHOA-IT1 Gene

Enhancers for RHOA-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G049338 1.9 FANTOM5 ENCODE dbSUPER 13.1 +21.0 20957 14.7 MLX CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC AMT QRICH1 IMPDH2 DALRD3 RHOA WDR6 NICN1 USP4 ENSG00000230454 RHOA-IT1
GH03G049898 1.9 FANTOM5 Ensembl ENCODE dbSUPER 9.8 -535.7 -535695 9.2 HNRNPUL1 HDGF PKNOX1 CREB3L1 AGO1 ARID4B SIN3A DMAP1 ZNF2 YY1 RBM6 QRICH1 NICN1 TMEM115 CCDC71 SEMA3F-AS1 IMPDH2 ENSG00000235236 RHOA-IT1 MST1R
GH03G049443 1.4 Ensembl ENCODE dbSUPER 13 -78.2 -78229 3.7 HDGF TBL1XR1 ARNT THRB GTF3C2 ELK1 ZNF207 FOS RELB ETV6 AMT QRICH1 TMEM115 RHOA-IT1 SEMA3F-AS1 WDR6 CCDC71 TMEM89 GMPPB IMPDH2
GH03G049217 1.3 Ensembl ENCODE 12.9 +148.3 148325 2.1 FOXA2 MLX ZNF133 ARID4B DMAP1 ZNF48 GTF3C2 SLC30A9 FOS SP5 AMT WDR6 QRICH1 CCDC71 NME6 MRPS18AP1 ZNF589 SEMA3F-AS1 RHOA-IT1 CCDC36
GH03G049428 1.1 ENCODE 13 -62.5 -62495 1.8 PKNOX1 MLX CREB3L1 ARID4B SIN3A DMAP1 YBX1 ZNF2 YY1 ZNF766 AMT QRICH1 TMEM115 NICN1 WDR6 RHOA-IT1 SEMA3F-AS1 CCDC71 TMEM89 GMPPB
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RHOA-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RHOA-IT1 Gene

Chromosome:
3
Start:
49,365,145 bp from pter
End:
49,367,006 bp from pter
Size:
1,862 bases
Orientation:
Minus strand

Genomic View for RHOA-IT1 Gene

Genes around RHOA-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RHOA-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RHOA-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for RHOA-IT1 Gene

Proteins for RHOA-IT1 Gene

Post-translational modifications for RHOA-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RHOA-IT1 Gene

Domains & Families for RHOA-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RHOA-IT1 Gene

Function for RHOA-IT1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RHOA-IT1 Gene

Localization for RHOA-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RHOA-IT1 Gene

Pathways & Interactions for RHOA-IT1 Gene

SuperPathways for RHOA-IT1 Gene

No Data Available

Interacting Proteins for RHOA-IT1 Gene

Gene Ontology (GO) - Biological Process for RHOA-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RHOA-IT1 Gene

Transcripts for RHOA-IT1 Gene

mRNA/cDNA for RHOA-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RHOA-IT1 Gene

No ASD Table

Relevant External Links for RHOA-IT1 Gene

GeneLoc Exon Structure for
RHOA-IT1
ECgene alternative splicing isoforms for
RHOA-IT1

Expression for RHOA-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RHOA-IT1 Gene

genes like me logo Genes that share expression patterns with RHOA-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RHOA-IT1 Gene

Orthologs for RHOA-IT1 Gene

Evolution for RHOA-IT1 Gene

ENSEMBL:
Gene Tree for RHOA-IT1 (if available)
TreeFam:
Gene Tree for RHOA-IT1 (if available)

No data available for Orthologs for RHOA-IT1 Gene

Paralogs for RHOA-IT1 Gene

No data available for Paralogs for RHOA-IT1 Gene

Variants for RHOA-IT1 Gene

Relevant External Links for RHOA-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RHOA-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RHOA-IT1 Gene

Disorders for RHOA-IT1 Gene

No disorders were found for RHOA-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RHOA-IT1 Gene

Publications for RHOA-IT1 Gene

No publications were found for RHOA-IT1 Gene.

Products for RHOA-IT1 Gene

Sources for RHOA-IT1 Gene

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