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Aliases for RHBG Gene

Aliases for RHBG Gene

  • Rh Family, B Glycoprotein (Gene/Pseudogene) 2 3
  • Rhesus Blood Group, B Glycoprotein 2 3
  • Rhesus Blood Group Family Type B Glycoprotein 4
  • Ammonium Transporter Rh Type B 3
  • Rh Family Type B Glycoprotein 4
  • Rh Type B Glycoprotein 4
  • SLC42A2 3

External Ids for RHBG Gene

Previous GeneCards Identifiers for RHBG Gene

  • GC01P154207
  • GC01P152104
  • GC01P153116
  • GC01P153555
  • GC01P153152
  • GC01P154605
  • GC01P127699

Summaries for RHBG Gene

Entrez Gene Summary for RHBG Gene

  • This gene encodes one of two non-erythroid members of the Rhesus (Rh) protein family. Non-erythroid Rh protein family members are mainly expressed in the kidney and belong to the methylammonium-ammonium permease/ammonia transporters superfamily. All Rh family proteins are predicted to be transmembrane proteins with 12 membrane spanning domains and intracytoplasmic N- and C-termini. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Jan 2012]

GeneCards Summary for RHBG Gene

RHBG (Rh Family, B Glycoprotein (Gene/Pseudogene)) is a Protein Coding gene. Among its related pathways are Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds and Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds. GO annotations related to this gene include ankyrin binding. An important paralog of this gene is RHCE.

UniProtKB/Swiss-Prot for RHBG Gene

  • Functions as a specific ammonium transporter.

Gene Wiki entry for RHBG Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RHBG Gene

Genomics for RHBG Gene

Regulatory Elements for RHBG Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for RHBG Gene

Start:
156,369,189 bp from pter
End:
156,385,221 bp from pter
Size:
16,033 bases
Orientation:
Plus strand

Genomic View for RHBG Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RHBG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RHBG Gene

Proteins for RHBG Gene

  • Protein details for RHBG Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H310-RHBG_HUMAN
    Recommended name:
    Ammonium transporter Rh type B
    Protein Accession:
    Q9H310
    Secondary Accessions:
    • A8K475
    • Q5SZW4
    • Q5SZW6
    • Q5SZW7
    • Q6P193
    • Q6YJI2
    • Q6YJI3

    Protein attributes for RHBG Gene

    Size:
    441 amino acids
    Molecular mass:
    47231 Da
    Quaternary structure:
    • Interacts (via C-terminus) with ANK2 and ANK3; required for targeting to the basolateral membrane.
    SequenceCaution:
    • Sequence=AAG01086.1; Type=Frameshift; Positions=425; Evidence={ECO:0000305}; Sequence=AAL05978.1; Type=Frameshift; Positions=425; Evidence={ECO:0000305}; Sequence=AAN34363.1; Type=Frameshift; Positions=425; Evidence={ECO:0000305}; Sequence=AAN34364.1; Type=Frameshift; Positions=425; Evidence={ECO:0000305};

    Alternative splice isoforms for RHBG Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for RHBG Gene

Proteomics data for RHBG Gene at MOPED

Post-translational modifications for RHBG Gene

Other Protein References for RHBG Gene

No data available for DME Specific Peptides for RHBG Gene

Domains for RHBG Gene

Gene Families for RHBG Gene

Graphical View of Domain Structure for InterPro Entry

Q9H310

UniProtKB/Swiss-Prot:

RHBG_HUMAN :
  • Q9H310
Family:
  • Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
genes like me logo Genes that share domains with RHBG: view

Function for RHBG Gene

Molecular function for RHBG Gene

UniProtKB/Swiss-Prot Function: Functions as a specific ammonium transporter.

Gene Ontology (GO) - Molecular Function for RHBG Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008519 ammonium transmembrane transporter activity ISS --
GO:0030506 ankyrin binding IPI 15611082
genes like me logo Genes that share ontologies with RHBG: view
genes like me logo Genes that share phenotypes with RHBG: view

Animal Models for RHBG Gene

MGI Knock Outs for RHBG:

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RHBG

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , miRNA , Transcription Factor Targeting and HOMER Transcription for RHBG Gene

Localization for RHBG Gene

Subcellular locations from UniProtKB/Swiss-Prot for RHBG Gene

Basolateral cell membrane; Multi-pass membrane protein. Cytoplasmic vesicle membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RHBG Gene COMPARTMENTS Subcellular localization image for RHBG gene
Compartment Confidence
plasma membrane 5
cytoskeleton 4
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for RHBG Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0005887 integral component of plasma membrane IDA 11024028
GO:0014731 spectrin-associated cytoskeleton IMP 18635543
GO:0016020 membrane --
GO:0016323 basolateral plasma membrane ISS 12595489
genes like me logo Genes that share ontologies with RHBG: view

Pathways for RHBG Gene

genes like me logo Genes that share pathways with RHBG: view

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

Interacting Proteins for RHBG Gene

Gene Ontology (GO) - Biological Process for RHBG Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0015696 ammonium transport ISS --
GO:0055085 transmembrane transport TAS --
GO:0070634 transepithelial ammonium transport IDA 18032481
GO:0072488 ammonium transmembrane transport ISS --
genes like me logo Genes that share ontologies with RHBG: view

Compounds for RHBG Gene

(1) HMDB Compounds for RHBG Gene

Compound Synonyms Cas Number PubMed IDs
Ammonia
  • NH3
7664-41-7

(3) Novoseek inferred chemical compound relationships for RHBG Gene

Compound -log(P) Hits PubMed IDs
amtb 88.9 1
methylammonium 88.2 2
ammonium 78.9 14
genes like me logo Genes that share compounds with RHBG: view

Transcripts for RHBG Gene

mRNA/cDNA for RHBG Gene

Unigene Clusters for RHBG Gene

Rh family, B glycoprotein (gene/pseudogene):
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RHBG

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for RHBG

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RHBG Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11
SP1: - -
SP2: - -
SP3: - - -
SP4: - -
SP5: -
SP6:

Relevant External Links for RHBG Gene

GeneLoc Exon Structure for
RHBG
ECgene alternative splicing isoforms for
RHBG

Expression for RHBG Gene

mRNA expression in normal human tissues for RHBG Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for RHBG Gene

This gene is overexpressed in Kidney - Cortex (12.8), Brain - Cerebellum (9.2), Brain - Cerebellar Hemisphere (8.7), Ovary (7.9), and Liver (4.2).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for RHBG Gene

SOURCE GeneReport for Unigene cluster for RHBG Gene Hs.131835

mRNA Expression by UniProt/SwissProt for RHBG Gene

Q9H310-RHBG_HUMAN
Tissue specificity: Specifically expressed in kidney. Also detected in liver and ovary.
genes like me logo Genes that share expressions with RHBG: view

In Situ Assay Products

Orthologs for RHBG Gene

This gene was present in the common ancestor of animals.

Orthologs for RHBG Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RHBG 35
  • 99.34 (n)
  • 99.13 (a)
RHBG 36
  • 93 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RHBG 35
  • 89.52 (n)
  • 88.7 (a)
RHBG 36
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia RHBG 35
  • 87.19 (n)
  • 87.12 (a)
RHBG 36
  • 72 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rhbg 35
  • 85.57 (n)
  • 85.49 (a)
Rhbg 16
Rhbg 36
  • 81 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia RHBG 36
  • 76 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RHBG 36
  • 64 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rhbg 35
  • 85.04 (n)
  • 85.94 (a)
chicken
(Gallus gallus)
Aves RHBG 36
  • 48 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 38 (a)
ManyToMany
African clawed frog
(Xenopus laevis)
Amphibia MGC68642 35
tropical clawed frog
(Silurana tropicalis)
Amphibia rhbg 35
  • 65.97 (n)
  • 66.2 (a)
zebrafish
(Danio rerio)
Actinopterygii rhbg 35
  • 65.02 (n)
  • 66.2 (a)
rhbg 36
  • 60 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP002011 35
  • 54.7 (n)
  • 47.88 (a)
fruit fly
(Drosophila melanogaster)
Insecta Rh50 35
  • 55.53 (n)
  • 47.63 (a)
Rh50 36
  • 42 (a)
OneToMany
Rh50 37
  • 45 (a)
worm
(Caenorhabditis elegans)
Secernentea rhr-1 36
  • 37 (a)
ManyToMany
rhr-2 36
  • 37 (a)
ManyToMany
rhr-1 37
  • 40 (a)
rhr-2 37
  • 41 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 42 (a)
ManyToMany
CSA.7075 36
  • 45 (a)
ManyToMany
CSA.7848 36
  • 43 (a)
ManyToMany
Species with no ortholog for RHBG:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RHBG Gene

ENSEMBL:
Gene Tree for RHBG (if available)
TreeFam:
Gene Tree for RHBG (if available)

Paralogs for RHBG Gene

Paralogs for RHBG Gene

genes like me logo Genes that share paralogs with RHBG: view

Variants for RHBG Gene

Sequence variations from dbSNP and Humsavar for RHBG Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs752640 -- 156,382,221(+) AACCC(A/G)CACTG intron-variant
rs752641 -- 156,382,222(+) ACCCA(C/T)ACTGC intron-variant
rs867921 -- 156,383,183(+) GGGGA(C/T)GGCTG intron-variant
rs867922 -- 156,383,299(+) CAGTC(A/G)CTCTT intron-variant
rs872119 -- 156,382,618(-) GGGTG(C/G)ATGCC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RHBG Gene

Variant ID Type Subtype PubMed ID
nsv872471 CNV Loss 21882294
nsv470742 CNV Loss 18288195

Relevant External Links for RHBG Gene

HapMap Linkage Disequilibrium report
RHBG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RHBG Gene

Disorders for RHBG Gene

(1) University of Copenhagen DISEASES for RHBG Gene

Relevant External Links for RHBG

Genetic Association Database (GAD)
RHBG
Human Genome Epidemiology (HuGE) Navigator
RHBG
genes like me logo Genes that share disorders with RHBG: view

No data available for UniProtKB/Swiss-Prot for RHBG Gene

Publications for RHBG Gene

  1. Rh type B glycoprotein is a new member of the Rh superfamily and a putative ammonia transporter in mammals. (PMID: 11024028) Liu Z. … Huang C.-H. (J. Biol. Chem. 2001) 3 4 23
  2. Electroneutral ammonium transport by basolateral rhesus B glycoprotein. (PMID: 15284342) Ludewig U. (J. Physiol. (Lond.) 2004) 3 4 23
  3. Modelling the human rhesus proteins: implications for structure and function. (PMID: 16281947) Conroy M.J. … Avent N.D. (Br. J. Haematol. 2005) 3 23
  4. Molecular biology of Rh proteins and relevance to molecular medicine. (PMID: 16764738) Avent N.D. … Skinner L.H. (Expert Rev Mol Med 2006) 3 23
  5. Ammonium transport in the colonic crypt cell line, T84: role for Rhesus glycoproteins and NKCC1. (PMID: 18032481) Worrell R.T. … Matthews J.B. (Am. J. Physiol. Gastrointest. Liver Physiol. 2008) 3 23

Products for RHBG Gene

Sources for RHBG Gene

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