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Aliases for RGS22 Gene

Aliases for RGS22 Gene

  • Regulator Of G-Protein Signaling 22 2 3 5
  • Regulator Of G-Protein Signalling 22 2
  • PRTD-NY2 3
  • CT145 3

External Ids for RGS22 Gene

Previous GeneCards Identifiers for RGS22 Gene

  • GC08M101044
  • GC08M096176
  • GC08M100973

Summaries for RGS22 Gene

GeneCards Summary for RGS22 Gene

RGS22 (Regulator Of G-Protein Signaling 22) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Peptide ligand-binding receptors. GO annotations related to this gene include GTPase activator activity.

UniProtKB/Swiss-Prot for RGS22 Gene

  • Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RGS22 Gene

Genomics for RGS22 Gene

Regulatory Elements for RGS22 Gene

Genomic Location for RGS22 Gene

Chromosome:
8
Start:
99,960,936 bp from pter
End:
100,131,268 bp from pter
Size:
170,333 bases
Orientation:
Minus strand

Genomic View for RGS22 Gene

Genes around RGS22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RGS22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RGS22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RGS22 Gene

Proteins for RGS22 Gene

  • Protein details for RGS22 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NE09-RGS22_HUMAN
    Recommended name:
    Regulator of G-protein signaling 22
    Protein Accession:
    Q8NE09
    Secondary Accessions:
    • A8K944
    • Q569L2
    • Q86Y71
    • Q9BYZ4
    • Q9UFN6

    Protein attributes for RGS22 Gene

    Size:
    1264 amino acids
    Molecular mass:
    147163 Da
    Quaternary structure:
    • Interacts with GNA11, GNA12 AND GNA13.
    SequenceCaution:
    • Sequence=AAG49397.1; Type=Frameshift; Positions=877, 882, 886, 891; Evidence={ECO:0000305};

    Alternative splice isoforms for RGS22 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for RGS22 Gene

Proteomics data for RGS22 Gene at MOPED

Post-translational modifications for RGS22 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for RGS22 Gene

Domains & Families for RGS22 Gene

Gene Families for RGS22 Gene

Protein Domains for RGS22 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for RGS22 Gene

Graphical View of Domain Structure for InterPro Entry

Q8NE09

UniProtKB/Swiss-Prot:

RGS22_HUMAN :
  • Contains 2 RGS domains.
Domain:
  • Contains 2 RGS domains.
genes like me logo Genes that share domains with RGS22: view

Function for RGS22 Gene

Molecular function for RGS22 Gene

UniProtKB/Swiss-Prot Function:
Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form.
genes like me logo Genes that share phenotypes with RGS22: view

Animal Model Products

miRNA for RGS22 Gene

miRTarBase miRNAs that target RGS22

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RGS22 Gene

Localization for RGS22 Gene

Subcellular locations from UniProtKB/Swiss-Prot for RGS22 Gene

Cytoplasm. Nucleus. Note=Expressed in the cytoplasm of spermatogonia and spermatocytes. In spermatids, also expressed in the nucleus.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RGS22 Gene COMPARTMENTS Subcellular localization image for RGS22 gene
Compartment Confidence
nucleus 4
plasma membrane 3
cytosol 2

Gene Ontology (GO) - Cellular Components for RGS22 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IBA --
genes like me logo Genes that share ontologies with RGS22: view

Pathways & Interactions for RGS22 Gene

genes like me logo Genes that share pathways with RGS22: view

Pathways by source for RGS22 Gene

Interacting Proteins for RGS22 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000354109%0d%0a9606.ENSP00000324806%0d%0a
Selected Interacting proteins: Q8NE09-RGS22_HUMAN ENSP00000354109 for RGS22 Gene via I2D STRING

Gene Ontology (GO) - Biological Process for RGS22 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0043547 positive regulation of GTPase activity IBA --
genes like me logo Genes that share ontologies with RGS22: view

No data available for SIGNOR curated interactions for RGS22 Gene

Drugs & Compounds for RGS22 Gene

No Compound Related Data Available

Transcripts for RGS22 Gene

Unigene Clusters for RGS22 Gene

Regulator of G-protein signaling 22:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RGS22 Gene

No ASD Table

Relevant External Links for RGS22 Gene

GeneLoc Exon Structure for
RGS22
ECgene alternative splicing isoforms for
RGS22

Expression for RGS22 Gene

mRNA expression in normal human tissues for RGS22 Gene

mRNA differential expression in normal tissues according to GTEx for RGS22 Gene

This gene is overexpressed in Testis (x26.8) and Ovary (x4.7).

Protein differential expression in normal tissues from HIPED for RGS22 Gene

This gene is overexpressed in Breast (42.6), Tlymphocyte (13.0), and Monocytes (8.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for RGS22 Gene



SOURCE GeneReport for Unigene cluster for RGS22 Gene Hs.120021

mRNA Expression by UniProt/SwissProt for RGS22 Gene

Q8NE09-RGS22_HUMAN
Tissue specificity: Testis-specific. Expressed in Leydig cells and spermatogenic cells from the spermatogonia to spermatid stages (at protein level).
genes like me logo Genes that share expression patterns with RGS22: view

Protein tissue co-expression partners for RGS22 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for RGS22 Gene

Orthologs for RGS22 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RGS22 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia RGS22 35
  • 87.77 (n)
  • 82.38 (a)
RGS22 36
  • 81 (a)
OneToOne
dog
(Canis familiaris)
Mammalia RGS22 35
  • 88.25 (n)
  • 81.96 (a)
RGS22 36
  • 82 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rgs22 35
  • 79.73 (n)
  • 76.1 (a)
Rgs22 16
Rgs22 36
  • 76 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia RGS22 35
  • 99.68 (n)
  • 99.6 (a)
RGS22 36
  • 100 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rgs22 35
  • 79.44 (n)
  • 76.06 (a)
oppossum
(Monodelphis domestica)
Mammalia RGS22 36
  • 61 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RGS22 36
  • 61 (a)
OneToOne
chicken
(Gallus gallus)
Aves RGS22 35
  • 64.93 (n)
  • 56.4 (a)
RGS22 36
  • 49 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia RGS22 36
  • 52 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia rgs22 35
  • 59.24 (n)
  • 50.5 (a)
zebrafish
(Danio rerio)
Actinopterygii LOC101884083 35
  • 49.95 (n)
  • 39.07 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 35 (a)
OneToOne
Species with no ortholog for RGS22:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RGS22 Gene

ENSEMBL:
Gene Tree for RGS22 (if available)
TreeFam:
Gene Tree for RGS22 (if available)

Paralogs for RGS22 Gene

No data available for Paralogs for RGS22 Gene

Variants for RGS22 Gene

Sequence variations from dbSNP and Humsavar for RGS22 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs2446927 - 100,063,578(+) CCGCC(A/C/T)TGCTC nc-transcript-variant, reference, missense
rs3133711 - 99,999,384(+) CTCAT(A/G)AAGAA intron-variant, reference, missense
rs873197 -- 100,020,464(-) ACCAC(C/T)CACTT intron-variant
rs930965 -- 100,038,796(+) AAATA(A/C)AGTAA intron-variant
rs1109409 -- 100,043,089(-) AGTGT(C/T)GGTAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RGS22 Gene

Variant ID Type Subtype PubMed ID
esv1205143 CNV Deletion 17803354
esv1068346 CNV Deletion 17803354
esv2466799 CNV Deletion 19546169
nsv396616 CNV Loss 16902084

Variation tolerance for RGS22 Gene

Residual Variation Intolerance Score: 82.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.97; 68.18% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for RGS22 Gene

HapMap Linkage Disequilibrium report
RGS22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RGS22 Gene

Disorders for RGS22 Gene

Relevant External Links for RGS22

Genetic Association Database (GAD)
RGS22
Human Genome Epidemiology (HuGE) Navigator
RGS22
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RGS22

No disorders were found for RGS22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RGS22 Gene

Publications for RGS22 Gene

  1. Genetic variations in regulator of G-protein signaling genes as susceptibility loci for second primary tumor/recurrence in head and neck squamous cell carcinoma. (PMID: 20627871) Wang J. … Wu X. (Carcinogenesis 2010) 3 48 67
  2. Germline sequence variants in TGM3 and RGS22 confer risk of basal cell carcinoma. (PMID: 24403052) Stacey S.N. … Stefansson K. (Hum. Mol. Genet. 2014) 3
  3. RGS22, a novel cancer/testis antigen, inhibits epithelial cell invasion and metastasis. (PMID: 21533872) Hu Y. … Sha J. (Clin. Exp. Metastasis 2011) 3
  4. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3
  5. RGS22, a novel testis-specific regulator of G-protein signaling involved in human and mouse spermiogenesis along with GNA12/13 subunits. (PMID: 18703424) Hu Y. … Sha J. (Biol. Reprod. 2008) 3

Products for RGS22 Gene

Sources for RGS22 Gene

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