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Aliases for RGS18 Gene

Aliases for RGS18 Gene

  • Regulator Of G-Protein Signaling 18 2 3
  • Regulator Of G-Protein Signalling 18 2 3
  • RGS13 3 4
  • Regulator Of G-Protein Signalling 13 3

External Ids for RGS18 Gene

Summaries for RGS18 Gene

Entrez Gene Summary for RGS18 Gene

  • This gene encodes a member of the regulator of G-protein signaling family. This protein is contains a conserved, 120 amino acid motif called the RGS domain. The protein attenuates the signaling activity of G-proteins by binding to activated, GTP-bound G alpha subunits and acting as a GTPase activating protein (GAP), increasing the rate of conversion of the GTP to GDP. This hydrolysis allows the G alpha subunits to bind G beta/gamma subunit heterodimers, forming inactive G-protein heterotrimers, thereby terminating the signal. Alternate transcriptional splice variants of this gene have been observed but have not been thoroughly characterized. [provided by RefSeq, Jul 2008]

GeneCards Summary for RGS18 Gene

RGS18 (Regulator Of G-Protein Signaling 18) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Activation of cAMP-Dependent PKA. GO annotations related to this gene include GTPase activator activity. An important paralog of this gene is RGS3.

UniProtKB/Swiss-Prot for RGS18 Gene

  • Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G(i) alpha-1, G(i) alpha-2, G(i) alpha-3 and G(q) alpha.

Gene Wiki entry for RGS18 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RGS18 Gene

Genomics for RGS18 Gene

Genomic Location for RGS18 Gene

Start:
192,158,457 bp from pter
End:
192,185,815 bp from pter
Size:
27,359 bases
Orientation:
Plus strand

Genomic View for RGS18 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RGS18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RGS18 Gene

Regulatory Elements for RGS18 Gene

Proteins for RGS18 Gene

  • Protein details for RGS18 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NS28-RGS18_HUMAN
    Recommended name:
    Regulator of G-protein signaling 18
    Protein Accession:
    Q9NS28
    Secondary Accessions:
    • B2RD23

    Protein attributes for RGS18 Gene

    Size:
    235 amino acids
    Molecular mass:
    27582 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for RGS18 Gene

neXtProt entry for RGS18 Gene

Proteomics data for RGS18 Gene at MOPED

Post-translational modifications for RGS18 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RGS18 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

No data available for DME Specific Peptides for RGS18 Gene

Domains for RGS18 Gene

Gene Families for RGS18 Gene

HGNC:
  • RGS :Regulators of G-protein signaling

Protein Domains for RGS18 Gene

UniProtKB/Swiss-Prot:

RGS18_HUMAN
Domain:
  • Contains 1 RGS domain.:
    • Q9NS28
genes like me logo Genes that share domains with RGS18: view

Function for RGS18 Gene

Molecular function for RGS18 Gene

UniProtKB/Swiss-Prot Function: Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G(i) alpha-1, G(i) alpha-2, G(i) alpha-3 and G(q) alpha.

Gene Ontology (GO) - Molecular Function for RGS18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005096 GTPase activator activity IBA --
genes like me logo Genes that share ontologies with RGS18: view

Phenotypes for RGS18 Gene

MGI mutant phenotypes for RGS18:
inferred from 1 alleles
GenomeRNAi human phenotypes for RGS18:
genes like me logo Genes that share phenotypes with RGS18: view

miRNA for RGS18 Gene

miRTarBase miRNAs that target RGS18

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for RGS18 Gene

Localization for RGS18 Gene

Subcellular locations from UniProtKB/Swiss-Prot for RGS18 Gene

Cytoplasm.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RGS18 Gene COMPARTMENTS Subcellular localization image for RGS18 gene
Compartment Confidence
cytosol 3
plasma membrane 3
extracellular 1
nucleus 1

Gene Ontology (GO) - Cellular Components for RGS18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IBA --
GO:0005886 plasma membrane IBA --
genes like me logo Genes that share ontologies with RGS18: view

Pathways for RGS18 Gene

genes like me logo Genes that share pathways with RGS18: view

Pathways by source for RGS18 Gene

Gene Ontology (GO) - Biological Process for RGS18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0008277 regulation of G-protein coupled receptor protein signaling pathway --
GO:0038032 termination of G-protein coupled receptor signaling pathway IEA --
GO:0043547 positive regulation of GTPase activity IEA --
genes like me logo Genes that share ontologies with RGS18: view

Transcripts for RGS18 Gene

Unigene Clusters for RGS18 Gene

Regulator of G-protein signaling 18:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RGS18 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6
SP1: - -
SP2: -
SP3: - - -
SP4:

Relevant External Links for RGS18 Gene

GeneLoc Exon Structure for
RGS18
ECgene alternative splicing isoforms for
RGS18

Expression for RGS18 Gene

mRNA expression in normal human tissues for RGS18 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for RGS18 Gene

This gene is overexpressed in Whole Blood (34.5) and Spleen (4.2).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for RGS18 Gene

SOURCE GeneReport for Unigene cluster for RGS18 Gene Hs.440890

mRNA Expression by UniProt/SwissProt for RGS18 Gene

Q9NS28-RGS18_HUMAN
Tissue specificity: Expressed in peripheral leukocytes, bone marrow, platelet, spleen and fetal liver.
genes like me logo Genes that share expressions with RGS18: view

Orthologs for RGS18 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RGS18 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RGS18 36
  • 99.43 (n)
  • 99.15 (a)
RGS18 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RGS18 36
  • 90.21 (n)
  • 85.96 (a)
RGS18 37
  • 86 (a)
OneToOne
dog
(Canis familiaris)
Mammalia RGS18 36
  • 92.62 (n)
  • 91.49 (a)
RGS18 37
  • 91 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rgs18 36
  • 86.52 (n)
  • 83.83 (a)
Rgs18 16
Rgs18 37
  • 84 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia RGS18 37
  • 74 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RGS18 37
  • 70 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rgs18 36
  • 86.52 (n)
  • 82.13 (a)
chicken
(Gallus gallus)
Aves RGS18 36
  • 69.38 (n)
  • 63.95 (a)
RGS18 37
  • 62 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia RGS18 37
  • 62 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia rgs18 36
  • 61.62 (n)
  • 53.68 (a)
zebrafish
(Danio rerio)
Actinopterygii rgs18 36
  • 57.48 (n)
  • 52.04 (a)
rgs18 37
  • 48 (a)
OneToOne
Species with no ortholog for RGS18:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RGS18 Gene

ENSEMBL:
Gene Tree for RGS18 (if available)
TreeFam:
Gene Tree for RGS18 (if available)

Paralogs for RGS18 Gene

Paralogs for RGS18 Gene

Selected SIMAP similar genes for RGS18 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RGS18: view

Variants for RGS18 Gene

Sequence variations from dbSNP and Humsavar for RGS18 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1317071 -- 192,169,104(-) TTAAA(A/G)TAACT intron-variant
rs1937235 -- 192,182,044(+) taata(A/C)ctcaa intron-variant
rs1937236 -- 192,165,317(+) atcga(C/T)gacaa intron-variant
rs2068805 -- 192,184,766(+) CCATT(C/T)ATAAT utr-variant-3-prime
rs4329489 -- 192,160,240(+) TAAAT(A/G)CAATT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RGS18 Gene

Variant ID Type Subtype PubMed ID
esv2663862 CNV Deletion 23128226

Relevant External Links for RGS18 Gene

HapMap Linkage Disequilibrium report
RGS18

Disorders for RGS18 Gene

Relevant External Links for RGS18

Genetic Association Database (GAD)
RGS18
Human Genome Epidemiology (HuGE) Navigator
RGS18
genes like me logo Genes that share disorders with RGS18: view

No data available for UniProtKB/Swiss-Prot for RGS18 Gene

Publications for RGS18 Gene

  1. Molecular cloning and characterization of a novel regulator of G- protein signaling from mouse hematopoietic stem cells. (PMID: 11042171) Park I.K. … Clarke M.F. (J. Biol. Chem. 2001) 2 3 4
  2. Cloning and characterization of a novel regulator of G protein signalling in human platelets. (PMID: 11955952) Gagnon A.W. … Leadley R.J. Jr. (Cell. Signal. 2002) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  5. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 49

Products for RGS18 Gene

Sources for RGS18 Gene

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