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Aliases for RGS18 Gene

Aliases for RGS18 Gene

  • Regulator Of G Protein Signaling 18 2 3 5
  • Regulator Of G-Protein Signalling 18 2 3
  • Regulator Of G-Protein Signaling 18 2 3
  • RGS13 3 4
  • Regulator Of G-Protein Signalling 13 3

External Ids for RGS18 Gene

Previous GeneCards Identifiers for RGS18 Gene

  • GC01P189917
  • GC01P187641
  • GC01P188594
  • GC01P189415
  • GC01P188859
  • GC01P190394
  • GC01P163363

Summaries for RGS18 Gene

Entrez Gene Summary for RGS18 Gene

  • This gene encodes a member of the regulator of G-protein signaling family. This protein is contains a conserved, 120 amino acid motif called the RGS domain. The protein attenuates the signaling activity of G-proteins by binding to activated, GTP-bound G alpha subunits and acting as a GTPase activating protein (GAP), increasing the rate of conversion of the GTP to GDP. This hydrolysis allows the G alpha subunits to bind G beta/gamma subunit heterodimers, forming inactive G-protein heterotrimers, thereby terminating the signal. Alternate transcriptional splice variants of this gene have been observed but have not been thoroughly characterized. [provided by RefSeq, Jul 2008]

GeneCards Summary for RGS18 Gene

RGS18 (Regulator Of G Protein Signaling 18) is a Protein Coding gene. Diseases associated with RGS18 include Cardiomyopathy, Familial Hypertrophic. Among its related pathways are Signaling by GPCR and G-AlphaQ Signaling. GO annotations related to this gene include GTPase activator activity. An important paralog of this gene is RGS3.

UniProtKB/Swiss-Prot for RGS18 Gene

  • Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G(i) alpha-1, G(i) alpha-2, G(i) alpha-3 and G(q) alpha.

Gene Wiki entry for RGS18 Gene

Additional gene information for RGS18 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RGS18 Gene

Genomics for RGS18 Gene

Regulatory Elements for RGS18 Gene

Enhancers for RGS18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H192133 0.4 ENCODE 16.8 -24.9 -24898 0 JUN RGS18 LOC105371661
GH01H192123 0.8 ENCODE 5.1 -34.4 -34423 1 LEF1 PKNOX1 TBL1XR1 NFRKB TAL1 ZNF175 ZBTB40 ZNF644 CHAMP1 RELA RGS18 LOC105371661
GH01H192157 0.6 ENCODE 4.9 +0.2 180 2 NFIC POLR2A CEBPB HMBOX1 CEBPG SPI1 GABPA RGS18 LOC105371662
GH01H192169 1.2 FANTOM5 Ensembl ENCODE 2.4 +11.7 11745 2 PKNOX1 ARNT JUN MAX CHAMP1 ZNF316 NFE2 MAFK DPF2 ZNF354B ENSG00000231767 TROVE2 ZNF101P2 RGS18 LOC105371662
GH01H192160 0.5 Ensembl 5 +3.2 3244 3 CC2D1A ZBTB33 CHAMP1 SPI1 RGS18 LOC105371662
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RGS18 on UCSC Golden Path with GeneCards custom track

Promoters for RGS18 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000017406 643 601 NFIC ZNF316

Genomic Location for RGS18 Gene

Chromosome:
1
Start:
192,158,457 bp from pter
End:
192,187,172 bp from pter
Size:
28,716 bases
Orientation:
Plus strand

Genomic View for RGS18 Gene

Genes around RGS18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RGS18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RGS18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RGS18 Gene

Proteins for RGS18 Gene

  • Protein details for RGS18 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NS28-RGS18_HUMAN
    Recommended name:
    Regulator of G-protein signaling 18
    Protein Accession:
    Q9NS28
    Secondary Accessions:
    • B2RD23

    Protein attributes for RGS18 Gene

    Size:
    235 amino acids
    Molecular mass:
    27582 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for RGS18 Gene

neXtProt entry for RGS18 Gene

Post-translational modifications for RGS18 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RGS18 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for RGS18 Gene

Domains & Families for RGS18 Gene

Gene Families for RGS18 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for RGS18 Gene

Suggested Antigen Peptide Sequences for RGS18 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RGS18: view

No data available for UniProtKB/Swiss-Prot for RGS18 Gene

Function for RGS18 Gene

Molecular function for RGS18 Gene

UniProtKB/Swiss-Prot Function:
Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G(i) alpha-1, G(i) alpha-2, G(i) alpha-3 and G(q) alpha.

Gene Ontology (GO) - Molecular Function for RGS18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005096 GTPase activator activity IBA --
genes like me logo Genes that share ontologies with RGS18: view
genes like me logo Genes that share phenotypes with RGS18: view

Animal Models for RGS18 Gene

MGI Knock Outs for RGS18:

Animal Model Products

CRISPR Products

miRNA for RGS18 Gene

miRTarBase miRNAs that target RGS18

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for RGS18
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for RGS18 Gene

Localization for RGS18 Gene

Subcellular locations from UniProtKB/Swiss-Prot for RGS18 Gene

Cytoplasm.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for RGS18 gene
Compartment Confidence
plasma membrane 4
cytosol 3
extracellular 1
nucleus 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Golgi apparatus (1)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for RGS18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IBA --
GO:0005886 plasma membrane IBA --
genes like me logo Genes that share ontologies with RGS18: view

Pathways & Interactions for RGS18 Gene

genes like me logo Genes that share pathways with RGS18: view

Gene Ontology (GO) - Biological Process for RGS18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0008277 regulation of G-protein coupled receptor protein signaling pathway IEA --
GO:0009968 negative regulation of signal transduction IEA --
GO:0043547 positive regulation of GTPase activity IEA --
genes like me logo Genes that share ontologies with RGS18: view

No data available for SIGNOR curated interactions for RGS18 Gene

Drugs & Compounds for RGS18 Gene

No Compound Related Data Available

Transcripts for RGS18 Gene

Unigene Clusters for RGS18 Gene

Regulator of G-protein signaling 18:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for RGS18
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RGS18 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6
SP1: - -
SP2: -
SP3: - - -
SP4:

Relevant External Links for RGS18 Gene

GeneLoc Exon Structure for
RGS18
ECgene alternative splicing isoforms for
RGS18

Expression for RGS18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RGS18 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for RGS18 Gene

This gene is overexpressed in Whole Blood (x34.5) and Spleen (x4.2).

Protein differential expression in normal tissues from HIPED for RGS18 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (47.3) and Platelet (20.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for RGS18 Gene



Protein tissue co-expression partners for RGS18 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of RGS18 Gene:

RGS18

SOURCE GeneReport for Unigene cluster for RGS18 Gene:

Hs.440890

mRNA Expression by UniProt/SwissProt for RGS18 Gene:

Q9NS28-RGS18_HUMAN
Tissue specificity: Expressed in peripheral leukocytes, bone marrow, platelet, spleen and fetal liver.

Evidence on tissue expression from TISSUES for RGS18 Gene

  • Blood(4.5)
  • Liver(4.1)
  • Nervous system(4.1)
  • Spleen(2.2)
genes like me logo Genes that share expression patterns with RGS18: view

Primer Products

No data available for Phenotype-based relationships between genes and organs from Gene ORGANizer for RGS18 Gene

Orthologs for RGS18 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RGS18 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RGS18 33 34
  • 99.43 (n)
dog
(Canis familiaris)
Mammalia RGS18 33 34
  • 92.62 (n)
cow
(Bos Taurus)
Mammalia RGS18 33 34
  • 90.21 (n)
mouse
(Mus musculus)
Mammalia Rgs18 33 16 34
  • 86.52 (n)
rat
(Rattus norvegicus)
Mammalia Rgs18 33
  • 86.52 (n)
oppossum
(Monodelphis domestica)
Mammalia RGS18 34
  • 74 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RGS18 34
  • 70 (a)
OneToOne
chicken
(Gallus gallus)
Aves RGS18 33 34
  • 69.38 (n)
lizard
(Anolis carolinensis)
Reptilia RGS18 34
  • 62 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia rgs18 33
  • 61.62 (n)
zebrafish
(Danio rerio)
Actinopterygii rgs18 33 34
  • 57.48 (n)
Species where no ortholog for RGS18 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RGS18 Gene

ENSEMBL:
Gene Tree for RGS18 (if available)
TreeFam:
Gene Tree for RGS18 (if available)

Paralogs for RGS18 Gene

Paralogs for RGS18 Gene

(18) SIMAP similar genes for RGS18 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RGS18: view

Variants for RGS18 Gene

Sequence variations from dbSNP and Humsavar for RGS18 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000009884 -- 192,180,526(+) TGTCT(-/A)AAATG intron-variant
rs1000017093 -- 192,178,169(+) AATAT(C/G)CCTGA intron-variant
rs1000130110 -- 192,185,193(+) ACTGA(C/G)AATAA utr-variant-3-prime
rs1000159285 -- 192,186,736(+) AAGAT(G/T)ATAGA utr-variant-3-prime
rs1000293859 -- 192,159,758(+) GAAAA(C/T)GCAAA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RGS18 Gene

Variant ID Type Subtype PubMed ID
esv2663862 CNV deletion 23128226
nsv1007060 CNV gain 25217958

Variation tolerance for RGS18 Gene

Residual Variation Intolerance Score: 61.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.34; 26.59% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for RGS18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RGS18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RGS18 Gene

Disorders for RGS18 Gene

MalaCards: The human disease database

(1) MalaCards diseases for RGS18 Gene - From: DISEASES

Disorder Aliases PubMed IDs
cardiomyopathy, familial hypertrophic
  • cardiomyopathy, hypertrophic, 1
- elite association - COSMIC cancer census association via MalaCards
Search RGS18 in MalaCards View complete list of genes associated with diseases

Relevant External Links for RGS18

Genetic Association Database (GAD)
RGS18
Human Genome Epidemiology (HuGE) Navigator
RGS18
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RGS18
genes like me logo Genes that share disorders with RGS18: view

No data available for UniProtKB/Swiss-Prot and Genatlas for RGS18 Gene

Publications for RGS18 Gene

  1. Molecular cloning and characterization of a novel regulator of G-protein signaling from mouse hematopoietic stem cells. (PMID: 11042171) Park IK … Clarke MF (The Journal of biological chemistry 2001) 2 3 4 60
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3 45 60
  3. Association study of 182 candidate genes in anorexia nervosa. (PMID: 20468064) Pinheiro AP … Woodside DB (American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 2010) 3 45 60
  4. Genetic variations in regulator of G-protein signaling genes as susceptibility loci for second primary tumor/recurrence in head and neck squamous cell carcinoma. (PMID: 20627871) Wang J … Wu X (Carcinogenesis 2010) 3 45 60
  5. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 3 4 60

Products for RGS18 Gene

Sources for RGS18 Gene

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