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Aliases for RGS17P1 Gene

Subcategory (RNA class) for RGS17P1 Gene

lncRNA

Aliases for RGS17P1 Gene

  • Regulator Of G-Protein Signaling 17 Pseudogene 1 2 3 5

External Ids for RGS17P1 Gene

ORGUL Members for RGS17P1 Gene

Previous GeneCards Identifiers for RGS17P1 Gene

  • GC13M041568

Summaries for RGS17P1 Gene

GeneCards Summary for RGS17P1 Gene

RGS17P1 (Regulator Of G-Protein Signaling 17 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RGS17P1 Gene

Genomics for RGS17P1 Gene

Regulatory Elements for RGS17P1 Gene

Enhancers for RGS17P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F040990 0.7 Ensembl ENCODE 0.8 -0.6 -571 7.0 CTCF PKNOX1 ESRRA MXI1 ZFP64 SIN3A EBF1 RAD21 ZNF7 ZNF316 WBP4 ELF1 CYCSP34 SLC25A15 RGS17P1 GC13M041023
GH13F041000 0.6 FANTOM5 0.4 -6.9 -6855 0.2 ZNF384 ELF1 WBP4 NAA16 FOXO1 RGS17P1 GC13M041023
GH13F040976 1.3 FANTOM5 ENCODE 0.4 +11.4 11362 10.7 PKNOX1 ATF1 FEZF1 YY1 JUNB REST TBX21 SMARCA4 PBX2 KDM1A ELF1 WBP4 CYCSP34 SUGT1P3 RGCC NAA16 FOXO1 RGS17P1 PIR56183
GH13F041001 0.5 Ensembl ENCODE 0.4 -12.7 -12670 10.0 PKNOX1 ATF1 MLX ARID4B DMAP1 YY1 SLC30A9 CBX5 FOS JUNB WBP4 ELF1 CYCSP34 SLC25A15 SUGT1P3 RGS17P1 GC13M041023
GH13F040972 0.9 ENCODE 0.3 +19.0 19013 4.3 HDAC1 PKNOX1 TBL1XR1 WRNIP1 ZFP64 RAD21 RARA GATA2 SCRT2 FOS WBP4 ELF1 CYCSP34 RGS17P1 PIR56183
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RGS17P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RGS17P1 Gene

Chromosome:
13
Start:
40,992,736 bp from pter
End:
40,993,331 bp from pter
Size:
596 bases
Orientation:
Minus strand

Genomic View for RGS17P1 Gene

Genes around RGS17P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RGS17P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RGS17P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RGS17P1 Gene

Proteins for RGS17P1 Gene

Post-translational modifications for RGS17P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RGS17P1 Gene

Domains & Families for RGS17P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RGS17P1 Gene

Function for RGS17P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RGS17P1 Gene

Localization for RGS17P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RGS17P1 Gene

Pathways & Interactions for RGS17P1 Gene

SuperPathways for RGS17P1 Gene

No Data Available

Interacting Proteins for RGS17P1 Gene

Gene Ontology (GO) - Biological Process for RGS17P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RGS17P1 Gene

Transcripts for RGS17P1 Gene

mRNA/cDNA for RGS17P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RGS17P1 Gene

No ASD Table

Relevant External Links for RGS17P1 Gene

GeneLoc Exon Structure for
RGS17P1
ECgene alternative splicing isoforms for
RGS17P1

Expression for RGS17P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RGS17P1 Gene

mRNA differential expression in normal tissues according to GTEx for RGS17P1 Gene

This gene is overexpressed in Whole Blood (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of RGS17P1 Gene:

RGS17P1
genes like me logo Genes that share expression patterns with RGS17P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RGS17P1 Gene

Orthologs for RGS17P1 Gene

Evolution for RGS17P1 Gene

ENSEMBL:
Gene Tree for RGS17P1 (if available)
TreeFam:
Gene Tree for RGS17P1 (if available)

No data available for Orthologs for RGS17P1 Gene

Paralogs for RGS17P1 Gene

No data available for Paralogs for RGS17P1 Gene

Variants for RGS17P1 Gene

Relevant External Links for RGS17P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RGS17P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RGS17P1 Gene

Disorders for RGS17P1 Gene

No disorders were found for RGS17P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RGS17P1 Gene

Publications for RGS17P1 Gene

No publications were found for RGS17P1 Gene.

Products for RGS17P1 Gene

Sources for RGS17P1 Gene

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