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Aliases for RGS11 Gene

Aliases for RGS11 Gene

  • Regulator Of G Protein Signaling 11 2 3
  • Regulator Of G-Protein Signaling 11 2 3 5
  • Regulator Of G-Protein Signalling 11 2 3
  • RS11 3

External Ids for RGS11 Gene

Previous GeneCards Identifiers for RGS11 Gene

  • GC16M000337
  • GC16M000259
  • GC16M000260
  • GC16M000261
  • GC16M000318

Summaries for RGS11 Gene

Entrez Gene Summary for RGS11 Gene

  • The protein encoded by this gene belongs to the RGS (regulator of G protein signaling) family. Members of the RGS family act as GTPase-activating proteins on the alpha subunits of heterotrimeric, signal-transducing G proteins. This protein inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits, thereby driving them into their inactive GDP-bound form. Alternative splicing occurs at this locus and four transcript variants encoding distinct isoforms have been identified. [provided by RefSeq, Nov 2013]

GeneCards Summary for RGS11 Gene

RGS11 (Regulator Of G Protein Signaling 11) is a Protein Coding gene. Diseases associated with RGS11 include Retinoschisis and Congenital Stationary Night Blindness. Among its related pathways are MAPK-Erk Pathway and Peptide ligand-binding receptors. GO annotations related to this gene include signal transducer activity and G-protein beta-subunit binding. An important paralog of this gene is RGS9.

UniProtKB/Swiss-Prot for RGS11 Gene

  • Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form.

Gene Wiki entry for RGS11 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RGS11 Gene

Genomics for RGS11 Gene

Regulatory Elements for RGS11 Gene

Enhancers for RGS11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G000239 1.2 Ensembl ENCODE dbSUPER 12.4 +35.9 35899 1.6 BCOR FOXA2 SAP130 NR2F1 CEBPB SIN3A MNT FOXA1 IRF9 GATA3 RGS11 FAM234A HBZ LOC105379545 ENSG00000269881
GH16G000233 1.2 ENCODE 9.6 +41.0 41031 2.9 DMAP1 YY1 ZNF143 ZNF548 ZNF263 SP3 TBX21 ZNF610 GLIS1 NBN RHOT2 JMJD8 WASH4P LOC105371038 ENSG00000268836 ENSG00000260022 HBZ ENSG00000259840 CAPN15 RGS11
GH16G000278 0.9 ENCODE 7.8 -4.4 -4358 3.0 PKNOX1 CBX3 ZNF48 GLIS2 ZNF350 FOS ZNF362 NFYA NFYC ZEB2 WASH4P RHOT2 ENSG00000268836 LOC105371038 PDIA2 RGS11 AXIN1 DDX11L10 MRPL28 HBZ
GH16G000912 1.2 ENCODE dbSUPER 4.8 -636.9 -636908 1.5 FOXA2 MLX ARID4B DMAP1 ZNF48 SP5 ZHX2 MXD4 MIER2 PPARG LMF1 LMF1-AS1 RGS11 ENSG00000260316
GH16G000562 0.6 FANTOM5 7.5 -286.2 -286159 0.2 ZNF600 ZBTB33 ZBTB26 GNG13 PRR35 RGS11 ARHGDIG RHBDL1 PIGQ NHLRC4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RGS11 on UCSC Golden Path with GeneCards custom track

Promoters for RGS11 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000082151 80 601 PHF8 SUZ12 HDAC2 ZNF600 ZBTB33 KDM6A EZH2 ZNF18

Genomic Location for RGS11 Gene

Chromosome:
16
Start:
268,301 bp from pter
End:
275,980 bp from pter
Size:
7,680 bases
Orientation:
Minus strand

Genomic View for RGS11 Gene

Genes around RGS11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RGS11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RGS11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RGS11 Gene

Proteins for RGS11 Gene

  • Protein details for RGS11 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O94810-RGS11_HUMAN
    Recommended name:
    Regulator of G-protein signaling 11
    Protein Accession:
    O94810
    Secondary Accessions:
    • O75883
    • Q4TT71
    • Q4TT72

    Protein attributes for RGS11 Gene

    Size:
    467 amino acids
    Molecular mass:
    52946 Da
    Quaternary structure:
    • Heterodimer with Gbeta5. Interacts with RGS7BP, leading to regulate the subcellular location of the heterodimer formed with Gbeta5 (By similarity).

    Alternative splice isoforms for RGS11 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for RGS11 Gene

Post-translational modifications for RGS11 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for RGS11 Gene

Domains & Families for RGS11 Gene

Gene Families for RGS11 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RGS11: view

No data available for UniProtKB/Swiss-Prot for RGS11 Gene

Function for RGS11 Gene

Molecular function for RGS11 Gene

GENATLAS Biochemistry:
negative regulator of G protein signaling 11,predominantly expressed in both brain and retina,functioning as GTPase-activating protein for G protein alpha subunits,G alpha i, G alpha o and complexing with G beta 5
UniProtKB/Swiss-Prot Function:
Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form.

Gene Ontology (GO) - Molecular Function for RGS11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004871 signal transducer activity IEA --
GO:0005096 GTPase activator activity TAS 9789084
GO:0031681 G-protein beta-subunit binding IPI 12606627
genes like me logo Genes that share ontologies with RGS11: view
genes like me logo Genes that share phenotypes with RGS11: view

Animal Models for RGS11 Gene

MGI Knock Outs for RGS11:

Animal Model Products

  • Taconic Biosciences Mouse Models for RGS11

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for RGS11

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for RGS11 Gene

Localization for RGS11 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for RGS11 gene
Compartment Confidence
plasma membrane 4
cytosol 3
nucleus 2
mitochondrion 1

Gene Ontology (GO) - Cellular Components for RGS11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005737 cytoplasm IBA --
GO:0005834 heterotrimeric G-protein complex IEA --
GO:0005886 plasma membrane IBA --
GO:0043234 protein complex IDA 18468998
genes like me logo Genes that share ontologies with RGS11: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for RGS11 Gene

Pathways & Interactions for RGS11 Gene

genes like me logo Genes that share pathways with RGS11: view

Gene Ontology (GO) - Biological Process for RGS11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0008277 regulation of G-protein coupled receptor protein signaling pathway TAS 9789084
GO:0009968 negative regulation of signal transduction IEA --
GO:0035556 intracellular signal transduction IEA --
GO:0043547 positive regulation of GTPase activity IEA --
genes like me logo Genes that share ontologies with RGS11: view

No data available for SIGNOR curated interactions for RGS11 Gene

Drugs & Compounds for RGS11 Gene

No Compound Related Data Available

Transcripts for RGS11 Gene

Unigene Clusters for RGS11 Gene

Regulator of G-protein signaling 11:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for RGS11

Alternative Splicing Database (ASD) splice patterns (SP) for RGS11 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4a · 4b · 4c ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9 ^ 10
SP1: - - -
SP2: - - -
SP3: - -
SP4:
SP5: -

Relevant External Links for RGS11 Gene

GeneLoc Exon Structure for
RGS11
ECgene alternative splicing isoforms for
RGS11

Expression for RGS11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RGS11 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for RGS11 Gene

This gene is overexpressed in Brain - Cerebellum (x8.3) and Brain - Cerebellar Hemisphere (x6.8).

NURSA nuclear receptor signaling pathways regulating expression of RGS11 Gene:

RGS11

SOURCE GeneReport for Unigene cluster for RGS11 Gene:

Hs.65756

Evidence on tissue expression from TISSUES for RGS11 Gene

  • Nervous system(4.8)
genes like me logo Genes that share expression patterns with RGS11: view

Primer Products

No data available for Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for RGS11 Gene

Orthologs for RGS11 Gene

This gene was present in the common ancestor of animals.

Orthologs for RGS11 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RGS11 34 35
  • 93.76 (n)
cow
(Bos Taurus)
Mammalia RGS11 34 35
  • 83.88 (n)
rat
(Rattus norvegicus)
Mammalia Rgs11 34
  • 82.59 (n)
mouse
(Mus musculus)
Mammalia Rgs11 34 16 35
  • 81.89 (n)
dog
(Canis familiaris)
Mammalia RGS11 34 35
  • 81.32 (n)
oppossum
(Monodelphis domestica)
Mammalia RGS11 35
  • 69 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RGS11 35
  • 69 (a)
OneToOne
chicken
(Gallus gallus)
Aves RGS11 34
  • 75.68 (n)
-- 35
  • 71 (a)
OneToMany
-- 35
  • 68 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia RGS11 35
  • 75 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia rgs9 34
  • 69.66 (n)
zebrafish
(Danio rerio)
Actinopterygii rgs11 34 35
  • 65.49 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP000232 34
  • 54.56 (n)
fruit fly
(Drosophila melanogaster)
Insecta CG7095 36
  • 41 (a)
CG42450 35
  • 14 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea eat-16 35
  • 30 (a)
ManyToMany
Species where no ortholog for RGS11 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RGS11 Gene

ENSEMBL:
Gene Tree for RGS11 (if available)
TreeFam:
Gene Tree for RGS11 (if available)

Paralogs for RGS11 Gene

Paralogs for RGS11 Gene

genes like me logo Genes that share paralogs with RGS11: view

Variants for RGS11 Gene

Sequence variations from dbSNP and Humsavar for RGS11 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1000133880 -- 272,853(+) CACGC(A/G)GGGGC intron-variant, nc-transcript-variant
rs1000299354 -- 268,363(+) TGGGA(A/G)TGACT intron-variant, nc-transcript-variant, utr-variant-3-prime
rs1000389084 -- 275,558(+) TGGCA(C/T)CGGCC intron-variant
rs1000734465 -- 273,634(+) ACCTG(A/G)GCAGG intron-variant
rs1000767682 -- 271,747(+) TCGAG(A/G)AGACC intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for RGS11 Gene

Variant ID Type Subtype PubMed ID
dgv1479e59 CNV duplication 20981092
dgv32n68 CNV loss 17160897
esv2422427 CNV duplication 17116639
esv3570031 CNV gain 25503493
esv3637561 CNV loss 21293372
esv3637562 CNV gain 21293372
esv3637563 CNV gain 21293372
nsv570947 CNV loss 21841781
nsv827477 CNV gain 20364138
nsv952896 CNV deletion 24416366

Variation tolerance for RGS11 Gene

Residual Variation Intolerance Score: 99.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 10.01; 90.01% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for RGS11 Gene

Human Gene Mutation Database (HGMD)
RGS11
SNPedia medical, phenotypic, and genealogical associations of SNPs for
RGS11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RGS11 Gene

Disorders for RGS11 Gene

MalaCards: The human disease database

(2) MalaCards diseases for RGS11 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
retinoschisis
  • retinoschisis 1, x-linked, juvenile
congenital stationary night blindness
  • congenital essential nyctalopia
- elite association - COSMIC cancer census association via MalaCards
Search RGS11 in MalaCards View complete list of genes associated with diseases

Relevant External Links for RGS11

Genetic Association Database (GAD)
RGS11
Human Genome Epidemiology (HuGE) Navigator
RGS11
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RGS11
genes like me logo Genes that share disorders with RGS11: view

No data available for UniProtKB/Swiss-Prot and Genatlas for RGS11 Gene

Publications for RGS11 Gene

  1. A G protein gamma subunit-like domain shared between RGS11 and other RGS proteins specifies binding to Gbeta5 subunits. (PMID: 9789084) Snow B.E. … Siderovski D.P. (Proc. Natl. Acad. Sci. U.S.A. 1998) 2 3 4 64
  2. A Large-scale genetic association study of esophageal adenocarcinoma risk. (PMID: 20453000) Liu C.Y. … Christiani D.C. (Carcinogenesis 2010) 3 46 64
  3. Genetic variations in regulator of G-protein signaling genes as susceptibility loci for second primary tumor/recurrence in head and neck squamous cell carcinoma. (PMID: 20627871) Wang J. … Wu X. (Carcinogenesis 2010) 3 46 64
  4. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 3 4 64
  5. Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. (PMID: 11157797) Daniels R.J. … Higgs D.R. (Hum. Mol. Genet. 2001) 3 4 64

Products for RGS11 Gene

  • Addgene plasmids for RGS11

Sources for RGS11 Gene

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