Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

RGPD5 Gene

protein-coding   GIFtS: 46
GCID: GC02P110550

RANBP2-Like And GRIP Domain Containing 5

  Search for RGPD5
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

Aliases
RANBP2-Like And GRIP Domain Containing 51 2     RANBP2-Like And GRIP Domain-Containing Protein 52
RGP52 3 5     RANBP2-Like And GRIP Domain-Containing Protein 5/62
Ran-Binding Protein 2-Like 1/22 3     RANBP2L13
RanBP2-Like 1/22 3     RANBP2L23
Sperm Membrane Protein BS-632 3     RGP63
BS632 5     RGP73
BS-632     RGPD73
Ran-Binding Protein 2-Like 12     RanBP2L13
ranBP2L12     RanBP2L23
RanBP2-Like 12     

External Ids:    HGNC: 324181   Entrez Gene: 842202   Ensembl: ENSG000000155687   OMIM: 6127085   UniProtKB: Q996663   

Export aliases for RGPD5 gene to outside databases

Previous GC identifer: GC02P109908


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for RGPD5 Gene:
RAN is a small GTP-binding protein of the RAS superfamily that is associated with the nuclear membrane and is
thought to control a variety of cellular functions through its interactions with other proteins. This gene shares
a high degree of sequence identity with RANBP2, a large RAN-binding protein localized at the cytoplasmic side of
the nuclear pore complex. It is believed that this RANBP2 gene family member arose from a duplication event 3 Mb
distal to RANBP2. Alternative splicing has been observed for this locus and two variants are described.
Additional splicing is suggested but complete sequence for further transcripts has not been determined. (provided
by RefSeq, Jul 2008)

GeneCards Summary for RGPD5 Gene: 
RGPD5 (RANBP2-like and GRIP domain containing 5) is a protein-coding gene. An important paralog of this gene is PPIE.

Gene Wiki entry for RGPD5 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NT_022135.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the RGPD5 gene promoter:
         POU2F1   Nkx2-5   Hlf   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): RGPD5 promoter sequence
   Search SABiosciences Chromatin IP Primers for RGPD5

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RGPD5


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q13   Ensembl cytogenetic band:  2q13   HGNC cytogenetic band: 2q13

RGPD5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RGPD5 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02P110550:  view genomic region     (about GC identifiers)

Start:
110,550,335 bp from pter      End:
110,615,272 bp from pter
Size:
64,938 bases      Orientation:
plus strand

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: RGPD5_HUMAN, Q99666 (See protein sequence)
Recommended Name: RANBP2-like and GRIP domain-containing protein 5/6  
Size: 1765 amino acids; 198924 Da
Subcellular location: Cytoplasm
Miscellaneous: One of the 8 copies of RANBP2 clustered close to the chromosome 2 centromere
Secondary accessions: Q53QN2 Q53T03 Q59GM7 Q9H0B2
Alternative splicing: 2 isoforms:  Q99666-1   Q99666-2   

Explore the universe of human proteins at neXtProt for RGPD5: NX_Q99666

Explore proteomics data for RGPD5 at MOPED 

Post-translational modifications:

  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_Q99666

  • RGPD5 Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    RGPD5 Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_005045.2  NP_115636.1  

    ENSEMBL proteins: 
     ENSP00000376962   ENSP00000392556   ENSP00000016946   ENSP00000411548   ENSP00000400797  
     ENSP00000409406   ENSP00000272454  

    Human Recombinant Protein Products for RGPD5: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom MassSpec 
    OriGene Custom Protein Services for RGPD5
    GenScript Custom Purified and Recombinant Proteins Services for RGPD5
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates 
    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for RGPD5 

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm ----

    RGPD5 for ontologies           About GeneDecksing



    RGPD5 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    OriGene Antibodies for RGPD5
    OriGene Custom Antibody Services for RGPD5
    GenScript Custom Superior Antibodies Services for RGPD5
    Abcam antibodies for RGPD5
    Cloud-Clone Corp. Antibodies for RGPD5 
    ThermoFisher Antibodies for RGPD5
    LSBio Antibodies in human, mouse, rat for RGPD5 

    Assay Products for RGPD5: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Assay Services for RGPD5
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for RGPD5
    Browse Enzo Life Sciences for kits & assays
    Cloud-Clone Corp. ELISAs for RGPD5 
    Cloud-Clone Corp. CLIAs for RGPD5


    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    HGNC Gene Families: 
    TTC: Tetratricopeptide (TTC) repeat domain containing

    5/7 InterPro protein domains (see all 7):
     IPR000156 Ran_bind_dom
     IPR011990 TPR-like_helical
     IPR011993 PH_like_dom
     IPR001440 TPR-1
     IPR000237 GRIP

    Graphical View of Domain Structure for InterPro Entry Q99666

    ProtoNet protein and cluster: Q99666

    1 Blocks protein domain: IPB000156 RanBP1 domain

    UniProtKB/Swiss-Prot: RGPD5_HUMAN, Q99666
    Similarity: Contains 1 GRIP domain
    Similarity: Contains 2 RanBD1 domains
    Similarity: Contains 3 TPR repeats


    RGPD5 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, Vector BioLabs, and Sirion Biotech, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section

         Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding ----
         
    RGPD5 for ontologies           About GeneDecksing


    Animal Models:
       inGenious Targeting Laboratory - Custom generated mouse model solutions for RGPD5 
       inGenious Targeting Laboratory - Custom generated inducible mouse model solutions for RGPD5

       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for RGPD5 
       genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for RGPD5 

    miRNA
    Products:
        
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat RGPD5
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate RGPD5
    SwitchGear 3'UTR luciferase reporter plasmidRGPD5 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene RNAi products in human, mouse, rat for RGPD5
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RGPD5

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for RGPD5
    Sirion Biotech Customized adenovirus for overexpression of RGPD5

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene clones in human, mouse for RGPD5 (see all 8)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector (see all 2): RGPD5 (NM_005054)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for RGPD5
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RGPD5

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for RGPD5
    Search LifeMap BioReagents cell lines for RGPD5
    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RGPD5


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section



    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for RGPD5

    STRING Interaction Network Preview (showing 5 interactants - click image to see more details)

    5/15 Interacting proteins for RGPD5 (Q996663 ENSP000000169464) via UniProtKB, MINT, STRING, and/or I2D (see all 15)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ENSG00000206289P287023I2D: score=1 
    ENSG00000227322P287023I2D: score=1 
    ENSG00000228333P287023I2D: score=1 
    ENSG00000231321P287023I2D: score=1 
    ENSG00000235712P287023I2D: score=1 
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000042protein targeting to Golgi ----
    GO:0046907intracellular transport ----

    RGPD5 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for RGPD5

    Search CenterWatch for drugs/clinical trials and news about RGPD5

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Sirion Biotech, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for RGPD5 gene (2 alternative transcripts): 
    NM_005054.2  NM_032260.2  

    Unigene Cluster for RGPD5:

    RANBP2-like and GRIP domain containing 5
    Hs.469630  [show with all ESTs]
    Unigene Representative Sequence: NM_005054
    13 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000393283(uc002tfc.3) ENST00000430736 ENST00000016946(uc021vly.1)
    ENST00000441344 ENST00000432606 ENST00000482778 ENST00000472794 ENST00000413468
    ENST00000495473 ENST00000493394 ENST00000495582 ENST00000477523 ENST00000272454

    miRNA
    Products:
         
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat RGPD5
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate RGPD5
    SwitchGear 3'UTR luciferase reporter plasmidRGPD5 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene RNAi products in human, mouse, rat for RGPD5
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RGPD5
    Clone
    Products:
         
    OriGene clones in human, mouse for RGPD5 (see all 8)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector (see all 2): RGPD5 (NM_005054)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for RGPD5
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RGPD5
    Primer
    Products:
        
    OriGene qSTAR qPCR primer pairs in human, mouse for RGPD5
    Search SABiosciences RT2 qPCR Primer Assays in human, mouse, rat RGPD5
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RGPD5
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RGPD5

    Additional mRNA sequence: 

    AB209082.1 AL136868.1 BC020901.1 U64675.2 

    24/47 DOTS entries (see all 47):

    DT.91900581  DT.92409447  DT.95274706  DT.95274721  DT.75115124  DT.92416382  DT.120954962  DT.120968086 
    DT.120954930  DT.120954977  DT.120968033  DT.86858214  DT.92453557  DT.120933586  DT.120968027  DT.91842999 
    DT.120954927  DT.120968053  DT.120992108  DT.120996976  DT.40118677  DT.120933571  DT.120933599  DT.120954978 

    24/217 AceView cDNA sequences (see all 217):

    AL043480 BM665763 CA393262 CD675459 AW440914 AI358754 AF012086 BQ695350 
    AA926801 AA347163 BU726234 AA972133 N67549 BE676452 CR626604 AI283773 
    CA437157 AV645489 AL701994 BU629371 AA081971 CA446006 AI301579 AA649886 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    RGPD5 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: GTTTCTGCAA
    RGPD5 Expression
    About this image


    See RGPD5 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for RGPD5

    SOURCE GeneReport for Unigene cluster: Hs.469630

    UniProtKB/Swiss-Prot: RGPD5_HUMAN, Q99666
    Tissue specificity: Expressed in testis

        SABiosciences Custom PCR Arrays for RGPD5
    Primer
    Products:
    OriGene qSTAR qPCR primer pairs in human, mouse for RGPD5
    Search SABiosciences RT2 qPCR Primer Assays in human, mouse, rat RGPD5
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RGPD5
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RGPD5
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RGPD5

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for RGPD5 gene from 5/7 species (see all 7)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    platypus
    (Ornithorhynchus anatinus)
    Mammalia --
    --
    --

    69(a)
    possible ortholog
    1 ↔ many
    Contig2998(4302-46119)
    Contig16387(978-14052)
    chicken
    (Gallus gallus)
    Aves PPIA6
    --
    (see all 3)
    --

    60(a)
    (see all 3)
    possible ortholog
    possible ortholog
    (see all 3)
    22(4060940-4061857)
    12(25698-75398)
    lizard
    (Anolis carolinensis)
    Reptilia --
    Uncharacterized protein
    42(a)
    possible ortholog
    3(107454117-107504389)
    fruit fly
    (Drosophila melanogaster)
    Insecta Nup3586
    CG50716
    --
    6(a)
    6(a)
    possible ortholog
    possible ortholog
    3R(21075316-21084394)
    3R(21444136-21446401)
    worm
    (Caenorhabditis elegans)
    Secernentea Y17G9B.46
    T22F3.126
    (see all 3)
    Protein T22F3.12
    (see all 3)


    (see all 3)
    many ↔ many
    many ↔ many
    (see all 3)
    IV(4752094-4753230)
    V(3589029-3592199)


    ENSEMBL Gene Tree for RGPD5 (if available)
    TreeFam Gene Tree for RGPD5 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for RGPD5 gene
    RGPD61 2  RGPD81 2  RGPD31 2  RGPD41 2  RGPD11 2  RGPD21 2  PPIE2  PPIAL4C2  
    RANBP22  PPIF2  PPIA2  PPIAL4D2  PPIAL4A2  PPIAL4G2  PPIAL4B2  
    7 SIMAP similar genes for RGPD5 using alignment to 4 protein entries:     RGPD5_HUMAN (see all proteins):
    RGPD6    RGPD2    RGPD8    RGPD3    RGPD4    RGPD1
    RANBP2

    RGPD5 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/15 SNPs in RGPD5 are shown (see all 15)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs2007294351,2
    --110572433(+) TAAGC-/AGTCTTCC 2 -- int10--------
    rs2020593351,2
    --110578147(+) TTCCC-/TTTTCT 2 -- int10--------
    rs2000060641,2
    --110587145(+) GAGCA-/CTAGTC 2 -- int10--------
    rs2010839171,2
    --110602386(+) GATGG-/GAAGAAGA 1 -- int10--------
    rs2017876781,2
    --110602918(+) AGATG-/CATCTA 1 -- int10--------
    rs1902509461,2
    ----110568428(+) ATTTTG/TTTTGT 2 -- int10--------
    rs1429251621,2
    ----110576834(-) ACTGCA/GCCATT 2 -- int10--------
    rs284788631,2
    ----110552127(+) GGTCTC/GGAAGA 2 -- int10--------
    rs3755469251,2
    ----110615451(+) CATCC-/AAGCTA 1 -- ds50010--------
    rs2004940161,2
    ----110613935(+) TACTTG/TGGGAG 1 -- ut310--------

    HapMap Linkage Disequilibrium report for RGPD5 (110550335 - 110615272 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 8 variations for RGPD5:    About this table     
    Variant IDTypeSubtypePubMed ID
    esv2720536CNV Deletion23290073
    esv2751812CNV Loss17911159
    nsv874863CNV Loss21882294
    nsv508159CNV Loss20534489
    nsv874777CNV Gain21882294
    dgv4263n71CNV Gain21882294
    nsv874871CNV Gain21882294
    nsv510884CNV Complex20534489

    SABiosciences Cancer Mutation PCR Assays
    Search QIAGEN SeqTarget long-range PCR primers for resequencing RGPD5
    DNA2.0 Custom Variant and Variant Library Synthesis for RGPD5

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    RGPD5 for disorders           About MalaCards
    OMIM gene information: 612708    OMIM disorders: --


    RGPD5 for disorders           About GeneDecksing


    Export disorders for RGPD5 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for RGPD5 gene, integrated from 9 sources (see all 19):
    (articles sorted by number of sources associating them with RGPD5)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621)1, 2, 3 Hillier L.W....Wilson R.K. (2005)
    2. Complex genomic rearrangements lead to novel primate gene function. (PubMed id 15710750)1, 2, 3 Ciccarelli F.D.... Bork P. (2005)
    3. Molecular cloning and characterization of a novel testis-specific nucleoporin-related gene. (PubMed id 10101573)1, 2, 9 Wang L.F....Koide S.S. (1999)
    4. Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PubMed id 11230166)1, 2 Wiemann S.... Poustka A. (2001)
    5. Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass. (PubMed id 23000965)1 Povlsen L.K....Choudhary C. (2012)
    6. Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724)1 Udeshi N.D....Carr S.A. (2012)
    7. A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)
    8. Toward an understanding of the protein interaction net work of the human liver. (PubMed id 21988832)1 Wang J....Yang X. (2011)
    9. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    10. Global identification of modular cullin-RING ligase su bstrates. (PubMed id 21963094)1 Emanuele M.J....Elledge S.J. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 84220 HGNC: 32418 AceView: RANBP2L1.2 Ensembl:ENSG00000015568 euGenes: HUgn84220
    ECgene: RGPD5 H-InvDB: RGPD5

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for RGPD5 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for RGPD5 gene:
    Search GeneIP for patents involving RGPD5

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Sirion Biotech, Cell lines from GenScript, and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Protease Activity Assays and Reagents   Browse Recombinant/Natural Proteins  
     Browse Stem Cell Products   Browse Tocris Biochemicals & Compounds  
     Browse cDNA Clones   Browse Proteome Profiler Antibody Arrays  
     OriGene Antibodies for RGPD5   OriGene RNAi products in human, mouse, rat for RGPD5  
     Browse OriGene qPCR primer pairs and template standards   Browse OriGene Protein Over-expression Lysates  
     OriGene Custom Mass Spec   OriGene clones in human, mouse for RGPD5  
     OriGene qSTAR qPCR primer pairs in human, mouse for RGPD5   Browse OriGene full length recombinant human proteins expressed in human HEK293 cells  
     Browse OriGene ORF clones   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for RGPD5   OriGene Custom Protein Services for RGPD5  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat RGPD5
     QIAGEN SeqTarget long-range PCR primers for resequencing RGPD5
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RGPD5
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RGPD5
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RGPD5
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RGPD5
     GenScript Custom Purified and Recombinant Proteins Services for RGPD5 GenScript cDNA clones with any tag delivered in your preferred vector for RGPD5
     GenScript Custom Assay Services for RGPD5 GenScript Custom Superior Antibodies Services for RGPD5
     GenScript Custom overexpressing Cell Line Services for RGPD5 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in RGPD5 promoter
     Search Chromatin IP Primers for RGPD5
     RT2 qPCR Primer Assay in human, mouse / rat RGPD5
     GNC Network for RGPD5
     SABiosciences Custom PCR Arrays for RGPD5
     Search Tocris compounds for RGPD5
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological Cell Lysates
     Browse Sino Biological cDNA Clones
     4000+ Proteins
     Search Sino Biological for antibodies, proteins & pathways
     Protein Production Services
     Transfection Reagents
     Protein A/G/L resins
     Isotyping reagents
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Biologicals
     Novus Tissue Slides
     Antibodies for RGPD5
     See all of Abcam's Antibodies, Kits and Proteins for RGPD5
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     Proteins for RGPD5
     Antibodies for RGPD5
     ELISAs for RGPD5
     CLIAs for RGPD5
     Search LifeMap BioReagents cell lines for RGPD5
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RGPD5
     SwitchGear 3'UTR luciferase reporter plasmids for RGPD5
     SwitchGear Promoter luciferase reporter plasmids for RGPD5
     ThermoFisher Antibodies for RGPD5
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RGPD5
     inGenious Targeting Laboratory - Custom generated mouse model solutions for RGPD5
     inGenious Targeting Laboratory - Custom generated inducible mouse model solutions for RGPD5
    Customized:
     lentivirus for stable overexpression
     lentivirus expression plasmids for stable overexpression
     adenovirus for overexpression of RGPD5
     LSBio Antibodies in human, mouse, rat for RGPD5
    Customized transgenic rodents for:
     Humanization
     Biomarker expression
     Off-target effect monitoring
     Translational medicine
     Tissue-specific gene expresssion
     Time-controlled gene expresssion
           
    GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 3 Nov 2013 , 7 Nov 2013 , 23 Jan 2014

    View Random Gene

    Category
    (GIFtS: 73)
    transforming growth factor, beta 1
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      RGPD5 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 106 solr: 1.4