Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RFPL4AP1 Gene

Aliases for RFPL4AP1 Gene

  • Ret Finger Protein Like 4A Pseudogene 1 2 3 5
  • Ret Finger Protein-Like 4A Pseudogene 1 2

External Ids for RFPL4AP1 Gene

Previous GeneCards Identifiers for RFPL4AP1 Gene

  • GC19P056289

Summaries for RFPL4AP1 Gene

GeneCards Summary for RFPL4AP1 Gene

RFPL4AP1 (Ret Finger Protein Like 4A Pseudogene 1) is a Pseudogene.

Additional gene information for RFPL4AP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RFPL4AP1 Gene

Genomics for RFPL4AP1 Gene

GeneHancer (GH) Regulatory Elements for RFPL4AP1 Gene

Promoters and enhancers for RFPL4AP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I055809 Enhancer 1 Ensembl ENCODE 0.3 +32.1 32081 0.5 HDAC1 PKNOX1 CLOCK RAD21 YY1 SP3 ZNF654 USF2 REST MIER2 SSC5D ENSG00000267523 U2AF2 NLRP4 NLRP11 RFPL4AP1
GH19I055771 Promoter 0.5 EPDnew 0.4 -6.5 -6484 0.1 RFPL4AL1 RFPL4AP1
GH19I055831 Promoter/Enhancer 0.7 EPDnew dbSUPER 0.2 +54.5 54452 0.1 NLRP11 NLRP4 RFPL4AP1
GH19I055817 Enhancer 0.4 dbSUPER 0.3 +42.2 42170 4.4 SRF POLR2A NLRP11 NLRP4 RFPL4AP1
GH19I055833 Enhancer 0.3 dbSUPER 0.2 +57.0 57026 1.6 IKZF1 NLRP4 NLRP11 RFPL4AP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RFPL4AP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RFPL4AP1 Gene

Genomic Locations for RFPL4AP1 Gene
chr19:55,777,553-55,778,957
(GRCh38/hg38)
Size:
1,405 bases
Orientation:
Plus strand
chr19:56,288,919-56,290,323
(GRCh37/hg19)

Genomic View for RFPL4AP1 Gene

Genes around RFPL4AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RFPL4AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RFPL4AP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RFPL4AP1 Gene

Proteins for RFPL4AP1 Gene

Post-translational modifications for RFPL4AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RFPL4AP1 Gene

Domains & Families for RFPL4AP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RFPL4AP1 Gene

Function for RFPL4AP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RFPL4AP1 Gene

Localization for RFPL4AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RFPL4AP1 Gene

Pathways & Interactions for RFPL4AP1 Gene

SuperPathways for RFPL4AP1 Gene

No Data Available

Interacting Proteins for RFPL4AP1 Gene

Gene Ontology (GO) - Biological Process for RFPL4AP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RFPL4AP1 Gene

Drugs & Compounds for RFPL4AP1 Gene

No Compound Related Data Available

Transcripts for RFPL4AP1 Gene

mRNA/cDNA for RFPL4AP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RFPL4AP1 Gene

No ASD Table

Relevant External Links for RFPL4AP1 Gene

GeneLoc Exon Structure for
RFPL4AP1
ECgene alternative splicing isoforms for
RFPL4AP1

Expression for RFPL4AP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RFPL4AP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RFPL4AP1 Gene:

RFPL4AP1
genes like me logo Genes that share expression patterns with RFPL4AP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RFPL4AP1 Gene

Orthologs for RFPL4AP1 Gene

Evolution for RFPL4AP1 Gene

ENSEMBL:
Gene Tree for RFPL4AP1 (if available)
TreeFam:
Gene Tree for RFPL4AP1 (if available)

No data available for Orthologs for RFPL4AP1 Gene

Paralogs for RFPL4AP1 Gene

No data available for Paralogs for RFPL4AP1 Gene

Variants for RFPL4AP1 Gene

Additional Variant Information for RFPL4AP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RFPL4AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RFPL4AP1 Gene

Disorders for RFPL4AP1 Gene

No disorders were found for RFPL4AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RFPL4AP1 Gene

Publications for RFPL4AP1 Gene

No publications were found for RFPL4AP1 Gene.

Products for RFPL4AP1 Gene

Sources for RFPL4AP1 Gene

Content
Loading form....