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Aliases for REXO1L2P Gene

Aliases for REXO1L2P Gene

  • REX1, RNA Exonuclease 1 Homolog-Like 2, Pseudogene 2 3 5
  • REX1, RNA Exonuclease 1 Homolog (S. Cerevisiae)-Like 2, Pseudogene 2

External Ids for REXO1L2P Gene

Previous GeneCards Identifiers for REXO1L2P Gene

  • GC08M086874
  • GC08M082051
  • GC08M086790
  • GC08M086791

Summaries for REXO1L2P Gene

GeneCards Summary for REXO1L2P Gene

REXO1L2P (REX1, RNA Exonuclease 1 Homolog-Like 2, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for REXO1L2P Gene

Genomics for REXO1L2P Gene

Regulatory Elements for REXO1L2P Gene


Genomic Location for REXO1L2P Gene

Chromosome:
8
Start:
85,775,016 bp from pter
End:
85,779,090 bp from pter
Size:
4,075 bases
Orientation:
Minus strand

Genomic View for REXO1L2P Gene

Genes around REXO1L2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
REXO1L2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for REXO1L2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for REXO1L2P Gene

Proteins for REXO1L2P Gene

Post-translational modifications for REXO1L2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for REXO1L2P Gene

Domains & Families for REXO1L2P Gene

Suggested Antigen Peptide Sequences for REXO1L2P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for REXO1L2P Gene

Function for REXO1L2P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for REXO1L2P Gene

Localization for REXO1L2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for REXO1L2P Gene

Pathways & Interactions for REXO1L2P Gene

SuperPathways for REXO1L2P Gene

No Data Available

Interacting Proteins for REXO1L2P Gene

Gene Ontology (GO) - Biological Process for REXO1L2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for REXO1L2P Gene

Drugs & Compounds for REXO1L2P Gene

No Compound Related Data Available

Transcripts for REXO1L2P Gene

mRNA/cDNA for REXO1L2P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for REXO1L2P Gene

No ASD Table

Relevant External Links for REXO1L2P Gene

GeneLoc Exon Structure for
REXO1L2P
ECgene alternative splicing isoforms for
REXO1L2P

Expression for REXO1L2P Gene

mRNA expression in normal human tissues for REXO1L2P Gene

mRNA expression in normal human tissues for REXO1L2P Gene

SOURCE GeneReport for Unigene cluster for REXO1L2P Gene Hs.535056

genes like me logo Genes that share expression patterns with REXO1L2P: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for REXO1L2P Gene

Orthologs for REXO1L2P Gene

Evolution for REXO1L2P Gene

ENSEMBL:
Gene Tree for REXO1L2P (if available)
TreeFam:
Gene Tree for REXO1L2P (if available)

No data available for Orthologs for REXO1L2P Gene

Paralogs for REXO1L2P Gene

No data available for Paralogs for REXO1L2P Gene

Variants for REXO1L2P Gene

Sequence variations from dbSNP and Humsavar for REXO1L2P Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs9642804 -- 85,774,965(+) GCCGC(C/T)GGCTG downstream-variant-500B
rs9643026 -- 85,774,820(+) GCTCG(A/G)GGCTG downstream-variant-500B
rs9643030 -- 85,775,407(+) GTCTT(A/G)GCGAC nc-transcript-variant
rs9643036 -- 85,776,074(+) TCTTG(C/T)TGGGG nc-transcript-variant
rs9643048 -- 85,777,526(+) TTTCC(C/G)TGCTC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for REXO1L2P Gene

Variant ID Type Subtype PubMed ID
essv5478 CNV CNV 17122850
essv1724 CNV CNV 17122850
nsv428204 CNV Gain 18775914
nsv831378 CNV Gain+Loss 17160897
nsv891123 CNV Loss 21882294
dgv7825n71 CNV Loss 21882294
nsv891133 CNV Loss 21882294
esv23169 CNV Gain 19812545
nsv471542 CNV Duplication 19718026
nsv6284 CNV Insertion 18451855
nsv820734 CNV Duplication 20802225
esv1009285 CNV Gain 20482838
nsv482122 CNV Gain 20164927
nsv831379 CNV Gain+Loss 17160897
esv1008777 CNV Gain 20482838
nsv820555 CNV Duplication 20802225
esv26935 CNV Gain 19812545
nsv31 OTHER Inversion 15895083
nsv6285 CNV Loss 18451855
nsv6286 CNV Insertion 18451855
nsv831380 CNV Gain+Loss 17160897
nsv436569 CNV Deletion 17901297
nsv33 CNV Loss 15895083
nsv831382 CNV Gain+Loss 17160897
nsv469603 CNV Complex 16826518
nsv34 OTHER Inversion 15895083
nsv6289 CNV Insertion 18451855
nsv36 CNV Insertion 15895083
nsv891137 CNV Loss 21882294
nsv891138 CNV Gain+Loss 21882294
nsv891139 CNV Gain 21882294
nsv483126 CNV Complex 15286789
dgv7828n71 CNV Gain 21882294
dgv7829n71 CNV Loss 21882294

Relevant External Links for REXO1L2P Gene

HapMap Linkage Disequilibrium report
REXO1L2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for REXO1L2P Gene

Disorders for REXO1L2P Gene

Relevant External Links for REXO1L2P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
REXO1L2P

No disorders were found for REXO1L2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for REXO1L2P Gene

Publications for REXO1L2P Gene

  1. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 3 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for REXO1L2P Gene

Sources for REXO1L2P Gene

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