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Aliases for REXO1L2P Gene

Aliases for REXO1L2P Gene

  • REXO1 Like 2, Pseudogene 2 3 5
  • REX1, RNA Exonuclease 1 Homolog (S. Cerevisiae)-Like 2, Pseudogene 2
  • REX1, RNA Exonuclease 1 Homolog-Like 2, Pseudogene 2

External Ids for REXO1L2P Gene

Previous GeneCards Identifiers for REXO1L2P Gene

  • GC08M086874
  • GC08M082051
  • GC08M086790
  • GC08M086791

Summaries for REXO1L2P Gene

GeneCards Summary for REXO1L2P Gene

REXO1L2P (REXO1 Like 2, Pseudogene) is a Pseudogene.

Additional gene information for REXO1L2P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for REXO1L2P Gene

Genomics for REXO1L2P Gene

Regulatory Elements for REXO1L2P Gene


Genomic Location for REXO1L2P Gene

Chromosome:
8
Start:
85,775,016 bp from pter
End:
85,779,090 bp from pter
Size:
4,075 bases
Orientation:
Minus strand

Genomic View for REXO1L2P Gene

Genes around REXO1L2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
REXO1L2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for REXO1L2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for REXO1L2P Gene

Proteins for REXO1L2P Gene

Post-translational modifications for REXO1L2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for REXO1L2P Gene

Domains & Families for REXO1L2P Gene

Suggested Antigen Peptide Sequences for REXO1L2P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for REXO1L2P Gene

Function for REXO1L2P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for REXO1L2P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for REXO1L2P Gene

Localization for REXO1L2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for REXO1L2P Gene

Pathways & Interactions for REXO1L2P Gene

SuperPathways for REXO1L2P Gene

No Data Available

Interacting Proteins for REXO1L2P Gene

Gene Ontology (GO) - Biological Process for REXO1L2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for REXO1L2P Gene

Drugs & Compounds for REXO1L2P Gene

No Compound Related Data Available

Transcripts for REXO1L2P Gene

mRNA/cDNA for REXO1L2P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for REXO1L2P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for REXO1L2P Gene

No ASD Table

Relevant External Links for REXO1L2P Gene

GeneLoc Exon Structure for
REXO1L2P
ECgene alternative splicing isoforms for
REXO1L2P

Expression for REXO1L2P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for REXO1L2P Gene

mRNA expression in normal human tissues for REXO1L2P Gene

NURSA nuclear receptor signaling pathways regulating expression of REXO1L2P Gene:

REXO1L2P

SOURCE GeneReport for Unigene cluster for REXO1L2P Gene:

Hs.535056
genes like me logo Genes that share expression patterns with REXO1L2P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for REXO1L2P Gene

Orthologs for REXO1L2P Gene

Evolution for REXO1L2P Gene

ENSEMBL:
Gene Tree for REXO1L2P (if available)
TreeFam:
Gene Tree for REXO1L2P (if available)

No data available for Orthologs for REXO1L2P Gene

Paralogs for REXO1L2P Gene

No data available for Paralogs for REXO1L2P Gene

Variants for REXO1L2P Gene

Sequence variations from dbSNP and Humsavar for REXO1L2P Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs112279308 -- 85,777,860(+) AAGAT(G/T)GAAGA upstream-variant-2KB
rs113289689 -- 85,775,036(+) TTTTG(A/G)AAGAG nc-transcript-variant
rs138806588 -- 85,774,641(+) AAAAA(C/G)AGGTA downstream-variant-500B
rs138869181 -- 85,775,231(+) GGGAG(C/T)GCTTG nc-transcript-variant
rs139154906 -- 85,776,908(+) CAGGG(C/G)GGAAC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for REXO1L2P Gene

Variant ID Type Subtype PubMed ID
dgv12227n54 CNV gain 21841781
dgv3856n106 CNV deletion 24896259
dgv4190e59 CNV duplication 20981092
dgv4191e59 CNV duplication 20981092
dgv7259n100 CNV gain 25217958
esv1008777 CNV gain 20482838
esv1009285 CNV gain 20482838
esv23169 CNV gain 19812545
esv26935 CNV gain 19812545
esv2759624 CNV gain+loss 17122850
esv2762756 CNV loss 21179565
esv2764101 CNV gain 21179565
esv3617894 CNV loss 21293372
nsv1023182 CNV gain 25217958
nsv1028959 CNV gain 25217958
nsv1075153 CNV deletion 25765185
nsv1076648 CNV duplication 25765185
nsv1078050 CNV duplication 25765185
nsv1139938 CNV duplication 24896259
nsv1141591 CNV duplication 24896259
nsv1148687 CNV duplication 26484159
nsv1151418 CNV deletion 26484159
nsv1153972 CNV duplication 26484159
nsv31 OTHER inversion 15895083
nsv33 CNV deletion 15895083
nsv34 OTHER inversion 15895083
nsv36 CNV insertion 15895083
nsv428204 CNV gain 18775914
nsv436569 CNV deletion 17901297
nsv469603 CNV gain+loss 16826518
nsv471542 CNV gain 19718026
nsv482122 CNV gain 20164927
nsv483126 CNV gain+loss 15286789
nsv611668 CNV gain 21841781
nsv611669 CNV loss 21841781
nsv6284 CNV insertion 18451855
nsv6285 CNV deletion 18451855
nsv6286 CNV insertion 18451855
nsv6289 CNV insertion 18451855
nsv820555 CNV duplication 20802225
nsv820734 CNV duplication 20802225
nsv831378 CNV gain+loss 17160897
nsv831379 CNV gain+loss 17160897
nsv831380 CNV gain+loss 17160897
nsv831382 CNV gain+loss 17160897
nsv951450 CNV duplication 24416366
nsv951452 CNV duplication 24416366
nsv951453 CNV duplication 24416366
nsv967611 CNV duplication 23825009
nsv971332 CNV duplication 23825009
nsv971677 CNV duplication 23825009
nsv981960 CNV duplication 23825009
nsv981961 CNV duplication 23825009

Relevant External Links for REXO1L2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
REXO1L2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for REXO1L2P Gene

Disorders for REXO1L2P Gene

Relevant External Links for REXO1L2P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
REXO1L2P

No disorders were found for REXO1L2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for REXO1L2P Gene

Publications for REXO1L2P Gene

  1. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C … Lander ES (Nature 2006) 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for REXO1L2P Gene

Sources for REXO1L2P Gene

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