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Aliases for REV3L-IT1 Gene

Subcategory (RNA class) for REV3L-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for REV3L-IT1 Gene

  • REV3L Intronic Transcript 1 2 3 5
  • REV3L Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for REV3L-IT1 Gene

Previous GeneCards Identifiers for REV3L-IT1 Gene

  • GC00U933794
  • GC06M111682

Summaries for REV3L-IT1 Gene

GeneCards Summary for REV3L-IT1 Gene

REV3L-IT1 (REV3L Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for REV3L-IT1 Gene

Genomics for REV3L-IT1 Gene

Regulatory Elements for REV3L-IT1 Gene

Enhancers for REV3L-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G111405 1.5 FANTOM5 Ensembl ENCODE 0.2 -45.1 -45124 2.0 HDGF TBP PKNOX1 WRNIP1 BMI1 RAD21 RARA CBX5 ZNF143 RELB REV3L TRAF3IP2-AS1 ENSG00000230177 SLC16A10 ENSG00000255389 TRAF3IP2 MFSD4B BRD7P4 REV3L-IT1
GH06G111426 1.4 FANTOM5 Ensembl ENCODE 0.2 -65.8 -65802 1.9 SIN3A BMI1 RAD21 YY1 ZSCAN5C ETV6 FOS CREM IKZF2 SP5 MFSD4B SLC16A10 TRAF3IP2 REV3L BRD7P4 REV3L-IT1
GH06G111410 1 Ensembl ENCODE 0.2 -49.2 -49174 0.8 HDAC1 CHD7 FOXK2 EED SCRT2 RELB IKZF2 SCRT1 MTA2 RNF2 REV3L TRAF3IP2-AS1 ENSG00000230177 BRD7P4 REV3L-IT1
GH06G111412 0.7 ENCODE 0.2 -50.7 -50681 0.5 TBL1XR1 BMI1 ZNF664 CBX5 EED ZSCAN29 RELB IKZF2 CREM MTA2 BRD7P4 REV3L-IT1
GH06G111418 0.7 FANTOM5 0.2 -56.6 -56648 0.3 HDGF PKNOX1 MTA2 CBFB JUNB GATAD2B DPF2 IKZF1 EED IKZF2 REV3L SLC16A10 TRAF3IP2 BRD7P4 REV3L-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around REV3L-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for REV3L-IT1 Gene

Chromosome:
6
Start:
111,360,641 bp from pter
End:
111,361,607 bp from pter
Size:
967 bases
Orientation:
Minus strand

Genomic View for REV3L-IT1 Gene

Genes around REV3L-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
REV3L-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for REV3L-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for REV3L-IT1 Gene

Proteins for REV3L-IT1 Gene

Post-translational modifications for REV3L-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for REV3L-IT1 Gene

Domains & Families for REV3L-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for REV3L-IT1 Gene

Function for REV3L-IT1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for REV3L-IT1 Gene

Localization for REV3L-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for REV3L-IT1 Gene

Pathways & Interactions for REV3L-IT1 Gene

SuperPathways for REV3L-IT1 Gene

No Data Available

Interacting Proteins for REV3L-IT1 Gene

Gene Ontology (GO) - Biological Process for REV3L-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for REV3L-IT1 Gene

Transcripts for REV3L-IT1 Gene

mRNA/cDNA for REV3L-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for REV3L-IT1 Gene

No ASD Table

Relevant External Links for REV3L-IT1 Gene

GeneLoc Exon Structure for
REV3L-IT1
ECgene alternative splicing isoforms for
REV3L-IT1

Expression for REV3L-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for REV3L-IT1 Gene

genes like me logo Genes that share expression patterns with REV3L-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for REV3L-IT1 Gene

Orthologs for REV3L-IT1 Gene

Evolution for REV3L-IT1 Gene

ENSEMBL:
Gene Tree for REV3L-IT1 (if available)
TreeFam:
Gene Tree for REV3L-IT1 (if available)

No data available for Orthologs for REV3L-IT1 Gene

Paralogs for REV3L-IT1 Gene

No data available for Paralogs for REV3L-IT1 Gene

Variants for REV3L-IT1 Gene

Relevant External Links for REV3L-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
REV3L-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for REV3L-IT1 Gene

Disorders for REV3L-IT1 Gene

No disorders were found for REV3L-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for REV3L-IT1 Gene

Publications for REV3L-IT1 Gene

  1. Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence. (PMID: 7566098) Adams M.D. … White O. (Nature 1995) 3 64

Products for REV3L-IT1 Gene

Sources for REV3L-IT1 Gene

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