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Aliases for RERG-IT1 Gene

Subcategory (RNA class) for RERG-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RERG-IT1 Gene

  • RERG Intronic Transcript 1 2 3 5
  • RERG Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for RERG-IT1 Gene

Previous GeneCards Identifiers for RERG-IT1 Gene

  • GC00U933742
  • GC12M015266

Summaries for RERG-IT1 Gene

GeneCards Summary for RERG-IT1 Gene

RERG-IT1 (RERG Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RERG-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RERG-IT1 Gene

Genomics for RERG-IT1 Gene

GeneHancer (GH) Regulatory Elements for RERG-IT1 Gene

Promoters and enhancers for RERG-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I015131 Enhancer 0.3 ENCODE 0.4 -17.0 -16964 0.2 FOSL2 GC12P015138 RERG-IT1 RERG
GH12I015134 Enhancer 0.2 FANTOM5 0.4 -19.5 -19514 0 GC12P015138 RERG-IT1 RERG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RERG-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RERG-IT1 Gene

Genomic Locations for RERG-IT1 Gene
chr12:15,112,363-15,114,698
(GRCh38/hg38)
Size:
2,336 bases
Orientation:
Minus strand
chr12:15,265,297-15,267,632
(GRCh37/hg19)

Genomic View for RERG-IT1 Gene

Genes around RERG-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RERG-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RERG-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for RERG-IT1 Gene

Proteins for RERG-IT1 Gene

Post-translational modifications for RERG-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RERG-IT1 Gene

Domains & Families for RERG-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RERG-IT1 Gene

Function for RERG-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RERG-IT1 Gene

Localization for RERG-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RERG-IT1 Gene

Pathways & Interactions for RERG-IT1 Gene

SuperPathways for RERG-IT1 Gene

No Data Available

Interacting Proteins for RERG-IT1 Gene

Gene Ontology (GO) - Biological Process for RERG-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RERG-IT1 Gene

Drugs & Compounds for RERG-IT1 Gene

No Compound Related Data Available

Transcripts for RERG-IT1 Gene

mRNA/cDNA for RERG-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RERG-IT1 Gene

No ASD Table

Relevant External Links for RERG-IT1 Gene

GeneLoc Exon Structure for
RERG-IT1
ECgene alternative splicing isoforms for
RERG-IT1

Expression for RERG-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RERG-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for RERG-IT1 Gene

This gene is overexpressed in Uterus (x7.0) and Fallopian Tube (x5.7).
genes like me logo Genes that share expression patterns with RERG-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RERG-IT1 Gene

Orthologs for RERG-IT1 Gene

Evolution for RERG-IT1 Gene

ENSEMBL:
Gene Tree for RERG-IT1 (if available)
TreeFam:
Gene Tree for RERG-IT1 (if available)

No data available for Orthologs for RERG-IT1 Gene

Paralogs for RERG-IT1 Gene

No data available for Paralogs for RERG-IT1 Gene

Variants for RERG-IT1 Gene

Additional Variant Information for RERG-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RERG-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RERG-IT1 Gene

Disorders for RERG-IT1 Gene

No disorders were found for RERG-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RERG-IT1 Gene

Publications for RERG-IT1 Gene

No publications were found for RERG-IT1 Gene.

Products for RERG-IT1 Gene

Sources for RERG-IT1 Gene

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