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Aliases for RERG-AS1 Gene

Subcategory (RNA class) for RERG-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RERG-AS1 Gene

  • RERG Antisense RNA 1 2 3 5
  • RERG Antisense RNA 1 (Non-Protein Coding) 2

External Ids for RERG-AS1 Gene

Previous GeneCards Identifiers for RERG-AS1 Gene

  • GC00U933308
  • GC12P015305

Summaries for RERG-AS1 Gene

GeneCards Summary for RERG-AS1 Gene

RERG-AS1 (RERG Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RERG-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RERG-AS1 Gene

Genomics for RERG-AS1 Gene

GeneHancer (GH) Regulatory Elements for RERG-AS1 Gene

Promoters and enhancers for RERG-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I015152 Enhancer 0.9 ENCODE dbSUPER 550.8 +1.0 957 1.1 CTCF JUN CEBPB DPF2 EP300 RAD21 FOXA1 HIC1 SP1 JUND RERG-AS1 GC12M015169 RERG
GH12I015151 Enhancer 0.7 ENCODE dbSUPER 550.8 -0.2 -221 0.2 CTCF ZNF654 SMC3 RAD21 RERG-AS1 GC12P015145 RERG
GH12I015162 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +12.3 12345 3.5 JUN MAX CEBPG RFX5 FOSL1 GATA3 POLR2A ZSCAN5C RCOR1 FOSL2 GC12M015169 RERG-AS1 RERG
GH12I015155 Enhancer 0.4 Ensembl dbSUPER 0.8 +3.6 3578 0.2 RERG-AS1 GC12M015169 RERG
GH12I015156 Enhancer 0.4 ENCODE dbSUPER 0.4 +5.2 5234 0.8 RERG RERG-AS1 GC12M015169
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RERG-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RERG-AS1 Gene

Genomic Locations for RERG-AS1 Gene
chr12:15,151,923-15,155,283
(GRCh38/hg38)
Size:
3,361 bases
Orientation:
Plus strand
chr12:15,304,857-15,308,217
(GRCh37/hg19)

Genomic View for RERG-AS1 Gene

Genes around RERG-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RERG-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RERG-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RERG-AS1 Gene

Proteins for RERG-AS1 Gene

Post-translational modifications for RERG-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RERG-AS1 Gene

Domains & Families for RERG-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RERG-AS1 Gene

Function for RERG-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RERG-AS1 Gene

Localization for RERG-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RERG-AS1 Gene

Pathways & Interactions for RERG-AS1 Gene

SuperPathways for RERG-AS1 Gene

No Data Available

Interacting Proteins for RERG-AS1 Gene

Gene Ontology (GO) - Biological Process for RERG-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RERG-AS1 Gene

Drugs & Compounds for RERG-AS1 Gene

No Compound Related Data Available

Transcripts for RERG-AS1 Gene

mRNA/cDNA for RERG-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RERG-AS1 Gene

No ASD Table

Relevant External Links for RERG-AS1 Gene

GeneLoc Exon Structure for
RERG-AS1
ECgene alternative splicing isoforms for
RERG-AS1

Expression for RERG-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RERG-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for RERG-AS1 Gene

This gene is overexpressed in Kidney - Cortex (x17.6) and Uterus (x6.3).
genes like me logo Genes that share expression patterns with RERG-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RERG-AS1 Gene

Orthologs for RERG-AS1 Gene

Evolution for RERG-AS1 Gene

ENSEMBL:
Gene Tree for RERG-AS1 (if available)
TreeFam:
Gene Tree for RERG-AS1 (if available)

No data available for Orthologs for RERG-AS1 Gene

Paralogs for RERG-AS1 Gene

No data available for Paralogs for RERG-AS1 Gene

Variants for RERG-AS1 Gene

Sequence variations from dbSNP and Humsavar for RERG-AS1 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000587980 -- 15,152,878(+) A/T intron_variant
rs1001455065 -- 15,154,807(+) C/A intron_variant
rs1001597639 -- 15,151,322(+) G/A/C upstream_transcript_variant
rs1002059455 -- 15,153,543(+) A/C intron_variant
rs1002571048 -- 15,150,146(+) G/A upstream_transcript_variant

Additional Variant Information for RERG-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RERG-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RERG-AS1 Gene

Disorders for RERG-AS1 Gene

Additional Disease Information for RERG-AS1

No disorders were found for RERG-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RERG-AS1 Gene

Publications for RERG-AS1 Gene

No publications were found for RERG-AS1 Gene.

Products for RERG-AS1 Gene

Sources for RERG-AS1 Gene

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