RERG Gene
protein-coding GIFtS : 50
GCID: GC12 M015160
RAS-like, estrogen-regulated, growth inhibitor
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Aliasesfor RERG gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases RAS-Like, Estrogen-Regulated, Growth Inhibitor 1 2 MGC157541 Ras-Related And Estrogen-Regulated Growth Inhibitor2
Export aliases for RERG gene to outside databases Previous GC identifers: GC12M015000 GC12M015405 GC12M015151
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Summariesfor RERG gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for RERG : RERG, a member of the RAS superfamily of GTPases, inhibits cell proliferation and tumor formation (Finlin et al., 2001 (PubMed 11533059)).(supplied by OMIM, Mar 2009) UniProtKB/Swiss-Prot: RERG_HUMAN, Q96A58 Function : Binds GDP/GTP and possesses intrinsic GTPase activity. Has higher affinity for GDP than for GTP. In celllines overexpression leads to a reduction in the rate of proliferation, colony formation and in tumorigenic potential
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Genomic Viewsfor RERG gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000012.11 NC_018923.1 NT_009714.17 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the RERG gene promoter: AML1a Lmo2 Nkx2-5 POU3F2 Meis-1b POU2F1 COMP1 POU2F1a Meis-1a Meis-1 Other transcription factors Search SABiosciences Chromatin IP Primers for RERG Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RERG
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 12p12.3 Ensembl cytogenetic band: 12p12.3 HGNC cytogenetic band: 12p13.1 RERG Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 12 GeneLoc Exon Structure
GeneLoc location for GC12M015160: view genomic region
(about GC identifiers )
Start:
15,260,716 bp from pter
End:
15,501,609 bp from pter
Size:
240,894 bases
Orientation:
minus strand
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Proteinsfor RERG gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: RERG_HUMAN, Q96A58 (See
protein sequence )Recommended Name: Ras-related and estrogen-regulated growth inhibitor Size : 199 amino acids; 22608 Da
Subcellular location : Cytoplasm
1 PDB 3D structure from and Proteopedia for RERG :2ATV (3D)
 
Secondary accessions : B2R9R0 B4DI02Alternative splicing : 2 isoforms : Q96A58-1 Q96A58-2 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for RERG: NX_Q96A58 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q96A58 RERG Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins (2 alternative transcripts):
NP_001177655.1 NP_116307.1 ENSEMBL proteins: ENSP00000256953 ENSP00000441505 ENSP00000438280 ENSP00000444485 ENSP00000439532 ENSP00000441860 ENSP00000440887 Human Recombinant Protein Products for RERG: Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view) : About this table
RERG for ontologies About GeneDecksing RERG Antibody Products: Assay Products for RERG:
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Protein
Domains / Familiesfor RERG gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
RERG for domains About GeneDecksing 3 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q96A58 ProtoNet protein and cluster: Q96A58
2 Blocks protein families : IPB001806 Transforming protein P21 RAS signature IPB003577 Ras small GTPase UniProtKB/Swiss-Prot: RERG_HUMAN, Q96A58 Similarity : Belongs to the small GTPase superfamily. Ras family
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Functionfor RERG gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: RERG_HUMAN, Q96A58 Function : Binds GDP/GTP and possesses intrinsic GTPase activity. Has higher affinity for GDP than for GTP. In celllines overexpression leads to a reduction in the rate of proliferation, colony formation and in tumorigenic potential Induction : Up-regulated by estradiol. Down-regulated by tamoxifen
Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view) : About this table
RERG for ontologies About GeneDecksing Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for RERG (see all 5 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for RERGOriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: RERG (NM_024730 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for RERG Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat RERG
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RERG
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Pathways & Interactionsfor RERG gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for RERG Gene Ontology (GO): 5 biological process terms (GO ID links to tree view) : About this table
RERG for ontologies About GeneDecksing
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Drugs & Compoundsfor RERG gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
RERG for compounds About GeneDecksing Browse Tocris compounds for RERG 1 HMDB Compound for RERG About this table 3 Novoseek chemical compound relationships for RERG gene About this table
Search CenterWatch for drugs/clinical trials and news about RERG
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Transcriptsfor RERG gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for RERG gene (2 alternative transcripts): NM_001190726.1 NM_032918.2 Unigene Cluster for RERG:
RAS-like, estrogen-regulated, growth inhibitor Hs.199487 [show with all ESTs ] Unigene Representative Sequence: NM_032918 9 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000256953 (uc001rct.3 uc010shu.2 ) ENST00000538313 (uc001rcs.3 )ENST00000536465 ENST00000546331 ENST00000545567 ENST00000537647 ENST00000393736 ENST00000537717 ENST00000437578 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for RERG (see all 5 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for RERGOriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: RERG (NM_024730 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for RERG Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat RERG
Additional cDNA sequence: AF339750.1 AK295343.1 AK311016.1 AK313881.1 BC007997.1
6 DOTS entries : DT.444193 DT.100776638
DT.100776640 DT.100776639 DT.121141861 DT.75188081 24/113 AceView cDNA sequences (see all 113 ):
BX645101 CD516953 CR614972 BU632135 AA564698 D79915 AF339750 AA962466 CR599509 AA437054 BU688092 AA742672 NM_032918 AI253107 BG900183 BI758132 BX358427 BX404162 BX398732 AA037415 CR614290 BG771143 BC007997 BX335509 GeneLoc Exon Structure 5/7 Alternative Splicing Database (ASD) splice patterns (SP) for RERG (see all 7 ) About this scheme ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b · 7c · 7d · 7e · 7f SP1 :         -   -     -   -       -   -             SP2 :         -   -     -   -       -               SP3 :           -     -   -       -   -             SP4 :         -   -     -   -                     SP5 :               -   -       -   -            
ECgene alternative splicing isoforms for RERG
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Expression for RERG gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section RERG expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: ACTTATTTTGAbout this image RERG expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
See RERG Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for RERG SOURCE GeneReport for Unigene cluster: Hs.199487 UniProtKB/Swiss-Prot: RERG_HUMAN, Q96A58 Tissue specificity : Detected in heart, brain, placenta, lung, liver, skin, kidney and pancreas. Detected in estrogenreceptor-positive breast-derived cell lines, but not in estrogen receptor-negative cell lines. Expression is decreased or lost in a significant proportion of primary breast tumors with poor clinical prognosis SABiosciences Custom PCR Arrays for RERG Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for RERGBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat RERG QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat RERG QIAGEN QuantiFast Probe-based Assays in human , mouse , rat RERG In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RERG
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Orthologsfor RERG gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for RERG gene from 4/17 species (see all 17 ) About this table
ENSEMBL Gene Tree for RERG (if available)TreeFam Gene Tree for RERG (if available)
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Paralogsfor RERG gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for RERG gene RASL12 2 RASL11A 2 RERGL 2 RASL11B 2 18/55 SIMAP similar genes for RERG using alignment to 4 protein entries: RERG_HUMAN (see all proteins )
(see all similar genes ):K-RAS KRAS c-bas/has RRAS2 RIT2 RAP1B RALB RALA RAP2A DKFZp547A0616 RAP2B RIT1 MRAS RAP2C RAP1A RERGL HRAS NRAS
RERG for paralogs About GeneDecksing
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Genomic Variantsfor RERG gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 12 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for RERG (15260716 - 15501609 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for RERG 1 Indel : 60080
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing RERG
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Disorders
/ Diseasesfor RERG gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
RERG for disorders About GeneDecksing
OMIM gene information: 612664
OMIM disorders : --5 diseases for RERG : About MalaCards pituitary carcinoma breast cancer pulmonary disease hepatocellular carcinoma carcinoma 3 Novoseek disease relationships for RERG gene About this table
Human Genome Epidemiology (HuGE) Navigator: RERG (4 documents) Export disorders for RERG gene to outside databases
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Publicationsfor RERG gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for RERG gene, integrated from 9 sources (see all 17 ): (articles sorted by number of sources associating them with RERG) Utopia : connect your pdf to the dynamic world of online information
RERG is a novel ras-related, estrogen-regulated and growth-inhibitory gene in breast cancer. (PubMed id 11533059) 1 , 2 , 3, 9 Finlin B.S.... Perou C.M. (2001) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Expression of CRABP1, GRP, and RERG mRNA in clinically non-functioning and functioning pituitary adenomas. (PubMed id 21270509) 1 Chile T....Giorgi R.R. (2011) RERG (Ras-like, oestrogen-regulated, growth-inhibitor ) expression in breast cancer: a marker of ER-positive luminal-like subtype. (PubMed id 20697807) 1 Habashy H.O....Ellis I.O. (2011) Genetic susceptibility to distinct bladder cancer sub phenotypes. (PubMed id 19692168) 1 Guey L.T....Malats N. (2010) PTEN identified as important risk factor of chronic o bstructive pulmonary disease. (PubMed id 19625176) 1 Hosgood H.D....Lan Q. (2009) Polymorphisms in innate immunity genes and lung cancer risk in Xuanwei, China. (PubMed id 19170196) 1 Shen M....Lan Q. (2009) Pathway-based evaluation of 380 candidate genes and lung cancer susceptibility suggests the importance of the cell cycle pathway. (PubMed id 18676680) 1 Hosgood H.D....Lan Q. (2008) Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348) 1 Barbe L....Andersson-Svahn H. (2008) hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PubMed id 17207965) 1 Lamesch P.... Vidal M. (2007)
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External Searches for RERG gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing RERG gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing RERG gene
(According to HUGE )
About This Section --
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Specialized Databases showing RERG gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for RERG gene: Search GeneIP for patents involving RERG GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor RERG gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for RERG OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for RERG OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for RERG OriGene Protein Over-expression Lysate for RERG Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for RERG OriGene 3'-UTR Clone for RERG OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for RERG OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for RERG Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for RERG OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for RERG OriGene Custom Protein Services for RERG OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat RERG QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing RERG QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RERG QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat RERG QIAGEN QuantiFast Probe-based Assays in human , mouse , rat RERG QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat RERG
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RERG Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RERG
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Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat RERG
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