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Aliases for REREP3 Gene

Aliases for REREP3 Gene

  • Arginine-Glutamic Acid Dipeptide (RE) Repeats Pseudogene 3 2 3

External Ids for REREP3 Gene

Previous GeneCards Identifiers for REREP3 Gene

  • GC15P022546

Summaries for REREP3 Gene

GeneCards Summary for REREP3 Gene

REREP3 (Arginine-Glutamic Acid Dipeptide (RE) Repeats Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for REREP3 Gene

Genomics for REREP3 Gene

Genomic Location for REREP3 Gene

Start:
22,258,614 bp from pter
End:
22,282,880 bp from pter
Size:
24,267 bases
Orientation:
Plus strand

Genomic View for REREP3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for REREP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for REREP3 Gene

No data available for Regulatory Elements for REREP3 Gene

Proteins for REREP3 Gene

Post-translational modifications for REREP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for REREP3 Gene

Domains for REREP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for REREP3 Gene

Function for REREP3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for REREP3 Gene

Localization for REREP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for REREP3 Gene

Pathways for REREP3 Gene

SuperPathways for REREP3 Gene

No Data Available

Interacting Proteins for REREP3 Gene

Gene Ontology (GO) - Biological Process for REREP3 Gene

None

No data available for Pathways by source for REREP3 Gene

Transcripts for REREP3 Gene

mRNA/cDNA for REREP3 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for REREP3 Gene

Arginine-glutamic acid dipeptide (RE) repeats pseudogene 3:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for REREP3

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for REREP3 Gene

No ASD Table

Relevant External Links for REREP3 Gene

GeneLoc Exon Structure for
REREP3
ECgene alternative splicing isoforms for
REREP3

Expression for REREP3 Gene

mRNA expression in normal human tissues for REREP3 Gene

mRNA differential expression in normal tissues according to GTEx for REREP3 Gene

This gene is overexpressed in Testis (25.7).

SOURCE GeneReport for Unigene cluster for REREP3 Gene Hs.451294

genes like me logo Genes that share expressions with REREP3: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for REREP3 Gene

Orthologs for REREP3 Gene

Evolution for REREP3 Gene

ENSEMBL:
Gene Tree for REREP3 (if available)
TreeFam:
Gene Tree for REREP3 (if available)

No data available for Orthologs for REREP3 Gene

Paralogs for REREP3 Gene

No data available for Paralogs for REREP3 Gene

Variants for REREP3 Gene

Sequence variations from dbSNP and Humsavar for REREP3 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs1353608 -- 22,274,664(-) TGAAA(C/T)GAGAG intron-variant
rs1391019 -- 22,274,668(-) CTGGT(A/G)AAATG intron-variant
rs1472404 -- 22,266,429(+) TGTCA(C/G)TCCAT intron-variant
rs1553038 -- 22,263,551(+) AGAAC(A/G)GACTC intron-variant
rs1817960 -- 22,260,865(+) GGGCA(C/T)TGAAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for REREP3 Gene

Variant ID Type Subtype PubMed ID
dgv668e1 CNV Complex 17122850
dgv669e1 CNV Complex 17122850
nsv428296 CNV Gain+Loss 18775914
dgv92e55 CNV Gain 17911159
dgv93e55 CNV Gain 17911159
dgv96e55 CNV Loss 17911159
nsv9179 CNV Gain+Loss 18304495
dgv2081n71 CNV Gain 21882294
nsv7260 OTHER Inversion 18451855
nsv821678 CNV Loss 15273396
dgv678e1 CNV Complex 17122850
dgv679e1 CNV Complex 17122850
esv33051 CNV Gain+Loss 17666407
dgv1n1 OTHER Inversion 15895083
esv1004259 OTHER Inversion 20482838
dgv44n16 CNV Insertion 17901297
dgv2108n71 CNV Gain 21882294
dgv2109n71 CNV Gain+Loss 21882294
dgv2110n71 CNV Gain 21882294
dgv684e1 CNV Complex 17122850
esv2751489 CNV Gain 17911159
dgv686e1 CNV Complex 17122850
dgv97e55 CNV Loss 17911159
dgv98e55 CNV Gain 17911159
esv34233 CNV Loss 17911159
dgv2148n71 CNV Gain 21882294
dgv2158n71 CNV Gain 21882294
dgv691e1 CNV Complex 17122850
essv13315 CNV CNV 17122850
esv2751492 CNV Gain 17911159
dgv2175n71 CNV Gain 21882294
dgv2183n71 CNV Gain 21882294
esv29701 CNV Gain+Loss 19812545
dgv422n67 CNV Gain 20364138
dgv10n14 CNV Loss 18776910
dgv11n14 CNV Gain 18776910
dgv2190n71 CNV Gain 21882294
dgv2197n71 CNV Gain 21882294
dgv2198n71 CNV Gain+Loss 21882294
dgv2199n71 CNV Gain+Loss 21882294
dgv2200n71 CNV Gain 21882294
nsv510653 CNV Loss 20534489
nsv511041 OTHER Inversion 20534489
dgv692e1 CNV Complex 17122850
dgv2202n71 CNV Loss 21882294
dgv693e1 CNV Complex 17122850
nsv442688 CNV CNV 18776908
nsv514767 CNV Complex 21397061
dgv2207n71 CNV Gain 21882294
dgv2209n71 CNV Gain 21882294
dgv99e55 CNV Gain 17911159
dgv100e55 CNV Loss 17911159
dgv101e55 CNV Loss 17911159
nsv903377 CNV Loss 21882294
dgv2219n71 CNV Gain+Loss 21882294
dgv2222n71 CNV Loss 21882294
nsv819960 CNV Gain 19587683
dgv2224n71 CNV Gain 21882294
dgv694e1 CNV Complex 17122850
nsv832919 CNV Gain+Loss 17160897
dgv2226n71 CNV Gain 21882294
dgv2227n71 CNV Gain 21882294
nsv903475 CNV Loss 21882294
dgv2230n71 CNV Gain+Loss 21882294
nsv832920 CNV Loss 17160897
nsv827237 CNV Gain 20364138
nsv437797 CNV Loss 16327808
nsv827239 CNV Gain 20364138
nsv832921 CNV Loss 17160897
nsv827240 CNV Gain 20364138
esv2749384 CNV Deletion 23290073
esv2659551 CNV Deletion 23128226
esv2749385 CNV Deletion 23290073
esv2599755 CNV Insertion 19546169
esv1651692 CNV Insertion 17803354
esv1530729 CNV Insertion 17803354

Relevant External Links for REREP3 Gene

HapMap Linkage Disequilibrium report
REREP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for REREP3 Gene

Disorders for REREP3 Gene

No disorders were found for REREP3 Gene.

No data available for UniProtKB/Swiss-Prot for REREP3 Gene

Publications for REREP3 Gene

No publications were found for REREP3 Gene.

Products for REREP3 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate REREP3
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for REREP3
    • Block miRNA regulation of REREP3 using miScript Target Protectors

    Sources for REREP3 Gene

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