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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

REL Gene

protein-coding   GIFtS: 65
GCID: GC02P061108

v-rel reticuloendotheliosis viral oncogene homolog (avian)

(Previous name: v-rel avian reticuloendotheliosis viral oncogene homolog...)
 Explore 39 diseases affiliated with
REL via our new
 Human Malady Compendium 
Biological research products
for REL
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
V-Rel Reticuloendotheliosis Viral Oncogene Homolog (Avian)1 2     C-Rel2
V-Rel Avian Reticuloendotheliosis Viral Oncogene Homolog1 2     C-Rel Proto-Oncogene Protein2
I-Rel1     Oncogene REL, Avian Reticuloendotheliosis2
C-Rel2     Proto-Oncogene C-Rel2

External Ids:    HGNC: 99541   Entrez Gene: 59662   Ensembl: ENSG000001629247   OMIM: 1649105   UniProtKB: Q048643   

Export aliases for REL gene to outside databases

Previous GC identifers: GC02P061237 GC02P061067 GC02P061083 GC02P061020 GC02P060851


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for REL:
The REL gene encodes c-Rel, a transcription factor that is a member of the Rel/NFKB family, which also includes RELA
(MIM 164014), RELB (604758), NFKB1 (MIM 164011), and NFKB2 (MIM 164012). These proteins are related through a highly
conserved N-terminal region termed the 'Rel domain,' which is responsible for DNA binding, dimerization, nuclear
localization, and binding to the NFKB inhibitor (MIM 164008) (Belguise and Sonenshein, 2007 (PubMed
18037997)).(supplied by OMIM, May 2008)

UniProtKB/Swiss-Prot: REL_HUMAN, Q04864
Function: Proto-oncogene that may play a role in differentiation and lymphopoiesis. NF-kappa-B is a pleiotropic
transcription factor which is present in almost all cell types and is involved in many biological processed such as
inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. NF-kappa-B is a homo- or
heterodimeric complex formed by the Rel-like domain-containing proteins RELA/p65, RELB, NFKB1/p105, NFKB1/p50, REL and
NFKB2/p52. The dimers bind at kappa-B sites in the DNA of their target genes and the individual dimers have distinct
preferences for different kappa-B sites that they can bind with distinguishable affinity and specificity. Different
dimer combinations act as transcriptional activators or repressors, respectively. NF-kappa-B is controlled by various
mechanisms of post-translational modification and subcellular compartmentalization as well as by interactions with
other cofactors or corepressors. NF-kappa-B complexes are held in the cytoplasm in an inactive state complexed with
members of the NF-kappa-B inhibitor (I-kappa-B) family. In a conventional activation pathway, I-kappa-B is
phosphorylated by I-kappa-B kinases (IKKs) in response to different activators, subsequently degraded thus liberating
the active NF-kappa-B complex which translocates to the nucleus. The NF-kappa-B heterodimer RELA/p65-c-Rel is a
transcriptional activator

Gene Wiki entry for REL


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_022184.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the REL gene promoter:
         AREB6   C/EBPbeta   Sp1   AP-1   ATF-2   IRF-7A   IRF-1   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidREL promoter sequence
   Search SABiosciences Chromatin IP Primers for REL

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat REL


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2p13-p12   Ensembl cytogenetic band:  2p16.1   HGNC cytogenetic band: 2p13-p12

REL Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
REL gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02P061108:  view genomic region     (about GC identifiers)

Start:
61,108,656 bp from pter      End:
61,150,645 bp from pter
Size:
41,990 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: REL_HUMAN, Q04864 (See protein sequence)
Recommended Name: Proto-oncogene c-Rel  
Size: 619 amino acids; 68520 Da
Subunit: Component of the NF-kappa-B p65-c-Rel complex. Component of the NF-kappa-B p50-c-Rel complex. Component of the
NF-kappa-B p52-c-Rel complex. Homodimer; component of the NF-kappa-B c-Rel-c-Rel complex (By similarity). Interacts
with NKIRAS1. Interacts with NFKBIB (By similarity). Interacts with NFKBIE
Subcellular location: Nucleus (By similarity)
Secondary accessions: Q2PNZ7 Q6LDY0

Explore the universe of human proteins at neXtProt for REL: NX_Q04864

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q04864

  • REL Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_002899.1  
    ENSEMBL proteins: 
     ENSP00000295025   ENSP00000377989  
    Reactome Protein details: Q04864
    Human Recombinant Protein Products: 
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    Novus Biologicals REL Protein
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for REL

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus ----
    GO:0005654nucleoplasm TAS--
    GO:0005737cytoplasm ----
    GO:0005829cytosol TAS--


    REL for ontologies           About GeneDecksing



    REL Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of REL
    R&D Systems Antibodies for REL (c-Rel)
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    Uscn Antibodies for REL
    ThermoFisher Antibody for REL

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    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for REL


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    REL for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR014756 Ig_E-set
     IPR008967 p53-like_TF_DNA-bd
     IPR002909 IPT_TIG_rcpt
     IPR013783 Ig-like_fold
     IPR000451 NF_Rel_Dor

    Graphical View of Domain Structure for InterPro Entry Q04864

    ProtoNet protein and cluster: Q04864

    3 Blocks protein families:
    IPB000451 NF-kappa-B/Rel/dorsal family
    IPB002909 Cell surface receptor IPT/TIG
    IPB011539 Rel homology


    UniProtKB/Swiss-Prot: REL_HUMAN, Q04864
    Similarity: Contains 1 RHD (Rel-like) domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: REL_HUMAN, Q04864
    Function: Proto-oncogene that may play a role in differentiation and lymphopoiesis. NF-kappa-B is a pleiotropic
    transcription factor which is present in almost all cell types and is involved in many biological processed such as
    inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. NF-kappa-B is a homo- or
    heterodimeric complex formed by the Rel-like domain-containing proteins RELA/p65, RELB, NFKB1/p105, NFKB1/p50, REL and
    NFKB2/p52. The dimers bind at kappa-B sites in the DNA of their target genes and the individual dimers have distinct
    preferences for different kappa-B sites that they can bind with distinguishable affinity and specificity. Different
    dimer combinations act as transcriptional activators or repressors, respectively. NF-kappa-B is controlled by various
    mechanisms of post-translational modification and subcellular compartmentalization as well as by interactions with
    other cofactors or corepressors. NF-kappa-B complexes are held in the cytoplasm in an inactive state complexed with
    members of the NF-kappa-B inhibitor (I-kappa-B) family. In a conventional activation pathway, I-kappa-B is
    phosphorylated by I-kappa-B kinases (IKKs) in response to different activators, subsequently degraded thus liberating
    the active NF-kappa-B complex which translocates to the nucleus. The NF-kappa-B heterodimer RELA/p65-c-Rel is a
    transcriptional activator

         Genatlas biochemistry entry for REL:
    avian reticuloendotheliosis viral (v-rel) oncogene homolog,involved in lymphomagenesis (diffuse large B cell lymphoma)

    10/233 SABiosciences Target genes for REL (see all 233):
    ADCK5 ADH7 ALDH4A1 AMY2B ANKRD33 ANO10 APOD ATP13A3 BLOC1S3 BNC1

    miRNA
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    SwitchGear 3'UTR luciferase reporter plasmidREL 3' UTR sequence
    Inhib. RNA
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for REL (see all 4)
    OriGene shRNA RFP: REL
    OriGene siRNA: REL
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    Clone
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    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat REL 

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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for REL

    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding IEA--
    GO:0003700sequence-specific DNA binding transcription factor activity IEA--
    GO:0005515protein binding IPI15799966


    REL for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for REL:
     Decreased mitotic index 

    Animal Models:
         Mouse knock-outs for REL: Reltm1Hcl Reltm1Grd Reltm1Brv
         14 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Rel):
     cardiovascular system  cellular  digestive/alimentary  embryogenesis  growth/size 
     hematopoietic system  homeostasis/metabolism  immune system  integument  liver/biliary system 
     mortality/aging  nervous system  respiratory system  skeleton 

    REL for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/52 super-pathways (see all 52About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Development_A3 receptor signaling
    Development_A3 receptor signaling1.00
    Development A1 receptor signaling0.65
    Development A3 receptor signaling1.00
    G-protein signaling_G-Protein alpha-q signaling cascades0.53
    Development_A1 receptor signaling0.65
    G-protein signaling G-Protein alpha-q signaling cascades0.53
    2Mucin expression in CF via IL-6, IL-17 signaling pathways
    Mucin expression in CF via IL-6, IL-17 signaling pathways1.00
    Cytokine production by Th17 cells in CF (Mouse model)0.37
    Cytokine production by Th17 cells in CF0.45
    Immune response_MIF-mediated glucocorticoid regulation0.28
    Mucin expression in CF via TLRs, EGFR signaling pathways0.41
    Immune response MIF-mediated glucocorticoid regulation0.28
    3Development_PDGF signaling via STATs and NF-kB
    Development_PDGF signaling via STATs and NF-kB1.00
    Development_Angiopoietin - Tie2 signaling0.38
    Development PDGF signaling via STATs and NF-kB1.00
    Development Angiopoietin - Tie2 signaling0.38
    4Development_A2B receptor- action via G-protein alpha s
    Development_A2B receptor- action via G-protein alpha s1.00
    Development_A2A receptor signaling0.43
    Development A2B receptor: action via G-protein alpha s1.00
    Development A2A receptor signaling0.43
    5Apoptosis and survival_Anti-apoptotic TNFs/NF-kB/Bcl-2 pathway
    Apoptosis and survival Anti-apoptotic TNFs/NF-kB/Bcl-2 pathway1.00
    Apoptosis and survival_Anti-apoptotic TNFs/NF-kB/IAP pathway0.46
    Apoptosis and survival_Anti-apoptotic TNFs/NF-kB/Bcl-2 pathway1.00
    Apoptosis and survival Anti-apoptotic TNFs/NF-kB/IAP pathway0.46

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    5/39 EMD Millipore Pathways for REL (see all 39)
        Immune response MIF-mediated glucocorticoid regulation
    Development TGF-beta receptor signaling
    Immune response Toll-like receptor (TLR) ligands and common TLR signaling pathway leading to cell proinflammatory response
    Transcription NF-kB signaling pathway
    Transcription P53 signaling pathway

    3 R&D Systems Pathways for REL
        Inflammasome Activation Pathways
    Toll-Like receptor Signaling Pathways
    TGF-beta Signaling Pathways

    3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for REL
        PKR Pathway
    Activation of NF-KappaB by PKR
    NF-KappaB Family Pathway

    1 Cell Signaling Technology (CST) Pathway for REL
        NF-kappaB Signaling

    5/46 GeneGo (Thomson Reuters) Pathways for REL (see all 46)
        Immune response TLR3 and TLR4 induce TICAM1-specific signaling pathway
    Development A2A receptor signaling
    Immune response Bacterial infections in normal airways
    Development EGFR signaling pathway
    Signal transduction AKT signaling

    5/6 BioSystems Pathways for REL (see all 6
        Leptin signaling pathway
    TCR Signaling Pathway
    B Cell Receptor Signaling Pathway
    TNF-alpha/NF-kB Signaling Pathway
    Atypical NF-kappaB pathway

    5/8        Reactome Pathways for REL (see all 8)
        Adaptive Immune System
    Activation of NF-kappaB in B Cells
    Signaling by the B Cell Receptor (BCR)
    Translocation of NF-kappaB from the Cytosol to the Nucleus
    Ubiquitination of IkB by SCF-beta-TrCP

    1 PharmGKB Pathway for REL
        Tacrolimus/Cyclosporine Pathway, Pharmacodynamics


    REL for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for REL

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/79 Interacting proteins for REL (Q048641, 2, 3 ENSP000002950254) via UniProtKB, MINT, STRING, and/or I2D (see all 79)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    NFKB1P198382, 3, ENSP000002265744MINT-6178520 MINT-48666 MINT-6178504 MINT-47884 MINT-48548 MINT-47902 MINT-6178544 I2D: score=6 STRING: ENSP00000226574
    NFKB2Q006532, 3, ENSP000001894444MINT-48598 MINT-6178520 MINT-47915 MINT-48733 MINT-6178504 MINT-47893 MINT-6178544 I2D: score=6 STRING: ENSP00000189444
    NFKBIEO002212, 3, ENSP000002750154MINT-47875 I2D: score=6 STRING: ENSP00000275015
    PAPOLAP510032, 3, ENSP000002162774MINT-47832 I2D: score=3 STRING: ENSP00000216277
    COMMD1Q8N6681, 3, ENSP000003082364EBI-307352,EBI-1550112 I2D: score=1 STRING: ENSP00000308236
    About this table

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001816cytokine production IEA--
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent ----
    GO:0043123positive regulation of I-kappaB kinase/NF-kappaB cascade IEP12761501
    GO:0045084positive regulation of interleukin-12 biosynthetic process IEA--


    REL for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    REL for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for REL
    10/21 Novoseek chemical compound relationships for REL gene (see all 21)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    manganese superoxide 22.7 1 16027730 (1)
    rantes 20.2 2 10023774 (1)
    tacrolimus 18.6 2 7510691 (1), 8757620 (1)
    chloramphenicol 14.3 3 1903456 (1), 8383323 (1)
    oligonucleotide 11.8 8 1549370 (2), 14522018 (2), 10465241 (1), 9188493 (1) (see all 5)
    phorbol 9.75 1 1741161 (1)
    7,12-dimethylbenz(a)anthracene 9.1 3 11160867 (2)
    serine 6.56 6 7675442 (2), 9837938 (1), 16027730 (1), 17072339 (1)
    nitric oxide 3.06 1 17720813 (1)
    lysine 0 1 18377428 (1)

    Search CenterWatch for drugs/clinical trials and news about REL 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for REL gene: 
    NM_002908.2  

    Unigene Cluster for REL:

    V-rel reticuloendotheliosis viral oncogene homolog (avian)
    Hs.631886  [show with all ESTs]
    Unigene Representative Sequence: NM_002908
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000295025(uc002sam.1 uc002san.1) ENST00000394479

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    Inhib. RNA
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat REL 
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      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat REL

    Additional cDNA sequence: 

    AK303926.1 BC051005.1 BC117191.1 BC143885.1 X75042.1 

    4 DOTS entries:

    DT.311516  DT.100009811  DT.95360644  DT.91984554 

    24/37 AceView cDNA sequences (see all 37):

    BX111941 N56815 BF115212 BF446716 AI910463 BE217899 AA279919 BM457679 
    NM_002908 AI917588 X75042 BF445023 AA122307 CD640399 BG431685 AW206098 
    AW206529 BC051005 AA827904 BE814107 BU657110 AI247359 AI760025 AA947855 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    REL expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See REL Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for REL

    SOURCE GeneReport for Unigene cluster: Hs.631886
        SABiosciences Expression via Pathway-Focused PCR Arrays including REL (see all 7): 
              Oncogenes & Tumor Suppressor Genes in human mouse rat
              NFKB Signaling Targets in human mouse rat
              Toll-Like Receptor Signaling Pathway in human mouse rat
              NFKB Signaling Pathway in human mouse rat
              Transcription Factors in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for REL gene from 5/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves REL1 v-rel reticuloendotheliosis viral oncogene homolog more 62.57(n)
    56.49(a)
      396500  NM_001167726.1  NP_001161198.1 
    lizard
    (Anolis carolinensis)
    Reptilia REL6
    --
    48(a)
    1 ↔ 1
    GL343523.1(438329-480999)
    African clawed frog
    (Xenopus laevis)
    Amphibia rel-A2 v-rel reticuloendotheliosis viral oncogene homolog more 76.22(n)    Z49252.1 
    zebrafish
    (Danio rerio)
    Actinopterygii rel6
    v-rel reticuloendotheliosis viral oncogene homolog...
    43(a)
    1 ↔ 1
    13(26019401-26043715)
    fruit fly
    (Drosophila melanogaster)
    Insecta dl3 immune response transcription factor 46(a)
    (best of 3)
        --


    ENSEMBL Gene Tree for REL (if available)
    TreeFam Gene Tree for REL (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for REL gene
    NFKB12  NFKB22  RELB2  RELA2  
    3 SIMAP similar genes for REL using alignment to 2 protein entries:     REL_HUMAN (see all proteins):
    RELA    RELB    NFKB2

    REL for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/626 NCBI SNPs in REL are shown (see all 626    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs101864671,2
    C,F,A,--61106795(+) CTCACT/CGCAAC 2 -- us2k1 int15Minor allele frequency- C:0.22NA WA CSA 9
    rs1812439671,2
    --61107115(+) ACTGAA/CAATGT 2 -- us2k1 int10--------
    rs356815391,2
    C,F,H,--61107207(+) TCTTGC/AGGGCC 2 -- us2k1 int16Minor allele frequency- A:0.01NS NA 600
    rs1849587961,2
    --61107296(+) TCTTGG/TTTCCA 2 -- us2k1 int10--------
    rs1881560401,2
    --61107348(+) TAGGTA/CTGTAA 2 -- us2k1 int10--------
    rs1817489841,2
    --61107566(+) TATGGA/GTCCCC 2 -- us2k1 int10--------
    rs1871518951,2
    --61107570(+) GGTCCA/CCCAGT 2 -- us2k1 int10--------
    rs346373431,2
    C,F,--61107581(+) TTTGGG/CCACTT 2 -- int1 us2k12Minor allele frequency- C:0.02NS 86
    rs1924967331,2
    --61107714(+) ATTCTC/GAAGTA 2 -- us2k1 int10--------
    rs1170545941,2
    --61107803(+) GTATGG/CACATT 2 -- us2k1 int11Minor allele frequency- C:0.01EA 120

    HapMap Linkage Disequilibrium report for REL (61108656 - 61150645 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 4 variations for REL
         3 CNVs: 2386 3361 8373
         1 Indel: 40333
    Human Gene Mutation Database (HGMD): REL

    SABiosciences Cancer Mutation PCR Assays
    1 SABiosciences qBiomarker Copy Number PCR Array containing REL:
    Oncogenes & Tumor Suppressor Genes 384HC
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    REL for disorders           About GeneDecksing

    OMIM gene information: 164910    OMIM disorders: --

    20/39 diseases for REL (see all 39):    About MalaCards
    diffuse large b-cell lymphoma    human t-cell leukemia virus type 1    sclerosing cholangitis    b-cell lymphomas
    primary sclerosing cholangitis    non-hodgkin lymphoma    cholangitis    systemic lupus erythematosus
    lupus erythematosus    hodgkin's lymphoma    adult t-cell leukemia    atopic dermatitis
    histoplasmosis    chronic lymphocytic leukemia    myeloproliferative disorder    lymphocytic leukemia
    leukemia/lymphoma    ulcerative colitis    t-cell leukemia    dermatitis

    2 diseases from the University of Copenhagen DISEASES database for REL:
    Lymphoma     Leukemia

    10/24 Novoseek disease relationships for REL gene (see all 24)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    leukemia t-cell 55.9 4 7935451 (1), 9247567 (1), 8510222 (1)
    reticuloendotheliosis 54.8 2 1848011 (1), 15870177 (1)
    lymphoma b-cell 45.1 18 17072339 (4), 16027730 (2), 17197926 (2), 15644776 (2) (see all 7)
    htlv-i infections 37.3 1 8627746 (1)
    response acute phase 36 1 14530385 (1)
    necrosis 33.2 5 8152812 (1), 9435232 (1), 8621542 (1), 10823840 (1) (see all 5)
    hodgkin disease 26.5 11 15644776 (4), 14755244 (1), 18245482 (1), 15870177 (1) (see all 5)
    inflammation 26.5 3 15110174 (1), 12857966 (1), 19347041 (1)
    tumors 19.7 19 17138822 (3), 12897145 (2), 9435232 (1), 10602468 (1) (see all 16)
    immunodeficiency 19 4 1493333 (1), 8394446 (1), 15917220 (1), 1741161 (1)

    Human Genome Epidemiology (HuGE) Navigator: REL (28 documents)
    Tumor Gene Database (TGDB): REL

    Export disorders for REL gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for REL gene, integrated from 9 sources (see all 317):
    (articles sorted by number of sources associating them with REL)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Activation of multiple NF-kappa B/Rel DNA-binding complexes by tumor necrosis factor. (PubMed id 8152812)1, 2, 9 Beg A.A. and Baldwin A.S. Jr. (1994)
    2. Inhibition of NF-kappaB activity by IkappaBbeta in association with kappaB-Ras. (PubMed id 15024091)1, 2 Chen Y.... Ghosh G. (2004)
    3. A new member of the IkappaB protein family, IkappaB epsilon, inhibits RelA (p65)-mediated NF-kappaB transcription. (PubMed id 9315679)1, 2 Li Z. and Nabel G.J. (1997)
    4. A novel complex between the p65 subunit of NF-kappa B and c-Rel binds to a DNA element involved in the phorbol ester induction of the human urokinase gene. (PubMed id 1740106)1, 2 Hansen S.K....Blasi F. (1992)
    5. I-Rel: a novel rel-related protein that inhibits NF-kappa B transcriptional activity. (PubMed id 1577270)1, 3 Ruben S.M....Rosen C.A. (1992)
    6. A human rel proto-oncogene cDNA containing an Alu fragment as a potential coding exon. (PubMed id 2666912)1, 2 Brownell E.... Rice N.R. (1989)
    7. Genetic characterization of human c-rel sequences. (PubMed id 3016517)1, 2 Brownell E.... Rice N.R. (1985)
    8. Interaction between c-Rel and the mitogen-activated protein kinase kinase kinase 1 signaling cascade in mediating kappaB enhancer activation. (PubMed id 8621542)1, 9 Meyer C.F....Tan T.H. (1996)
    9. Deficient translocation of c-Rel is associated with impaired Th1 cytokine production in T cells from atopic dermatitis patients. (PubMed id 15660915)1, 9 Dieckhoff K....Jung T. (2005)
    10. Unraveling androgen receptor interactomes by an array-based method: discovery of proto-oncoprotein c-Rel as a negative regulator of androgen receptor. (PubMed id 17011549)1, 9 Mukhopadhyay N.K....Liu B.C. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5966 HGNC: 9954 AceView: REL Ensembl:ENSG00000162924 euGenes: HUgn5966
    ECgene: REL H-InvDB: REL

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for REL Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for REL Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for REL gene:
    Search GeneIP for patents involving REL

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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