Aliases
for REG1P gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA
Quality score for the ORGUL clustered with this gene is 3
| Aliases |
|---|
| Regenerating Islet-Derived 1 Pseudogene1 2 | | REGL1 2 | | RS1 2 | | Rat Regenerating Islet-Derived-Like, Human Homolog (Pancreatic StoneProtein-Like, Pancreatic Thread Protein-Like)1 | | Regenerating Islet-Derived-Like, Pancreatic Stone Protein-Like, PancreaticThread Protein-Like (Rat)1 |
| External Ids: | HGNC: 99531 | Entrez Gene: 59692 | Ensembl: ENSG000002047877 | | ORGUL members: | |
|---|
| NONCODE:n383660 n383662 | |
Export aliases for REG1P gene to outside databasesPrevious GC identifers: GC02M079218 GC02M079097
|---|
Summaries
for REG1P gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
-- |
Genomic Views
for REG1P gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000002.11 NC_018913.1 NT_022184.15
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the REG1P gene promoter:
Bach1 SREBP-1c CUTL1 LCR-F1 SREBP-1b Evi-1 AREB6 SREBP-1a ZID NF-kappaB1
Other transcription factors
Search SABiosciences Chromatin IP Primers for REG1P
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat REG1P |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 2p12 Ensembl cytogenetic band: 2p12 HGNC cytogenetic band: 2p12REG1P Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 2 GeneLoc Exon Structure GeneLoc location for GC02M079363: view genomic region
(about GC identifiers)
Start:
|
79,362,629 bp from pter |
End:
|
79,365,553 bp from pter |
Size:
|
2,925 bases |
Orientation:
|
minus strand |
ORGUL member locations:
Legend (see complete legend)
 |
Proteins
for REG1P gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB: --
|
Protein
Domains /
Families
for REG1P gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| -- |
Function
for REG1P gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase,
shRNA from
OriGene,
Sirion Biotech,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Sirion Biotech,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
Sirion Biotech,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Animal Models:
Cell Line
Products: |  | GenScript Custom overexpressing Cell Line Services for REG1P | |  | Search LifeMap BioReagents cell lines for REG1P | In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for REG1P |
Pathways & Interactions
for REG1P gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for REG1P
|
Drugs & Compounds
for REG1P gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for REG1P
Search CenterWatch for drugs/clinical trials and news about REG1P 
|
Transcripts
for REG1P gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
Sirion Biotech,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
Unigene Clusters for REG1P: Regenerating islet-derived 1 pseudogene Hs.584797 [show with all ESTs], Hs.716255 [show with all ESTs]Unigene Representative Sequences: D56495, AK1265617 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000444841(uc002soa.1) ENST00000377435(uc002sob.1) ENST00000447469
ENST00000414597 ENST00000443710 ENST00000450249 ENST00000434852
Additional cDNA sequence: AK126561.1 NR_002714.1 7 DOTS entries: DT.308257 DT.101976696 DT.102824096 DT.100794212 DT.100794214 DT.120961909 DT.95255502 20 AceView cDNA sequences: D56495 AA363643 D56494 NM_006508 BG142191 AK126561 AA363642 CD622836 CD622835 CD622827 AA363721 CD622824 CD622820 CD622831 CD622832 CD622814 CD622828 CD622823 CD622818 CD622817
GeneLoc Exon Structure
|
Expression
for REG1P gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| REG1P expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: TTTCCCCCAT
About this image
Genevestigator expression for REG1P
SOURCE GeneReport for Unigene clusters: Hs.584797 Hs.716255
SABiosciences Custom PCR Arrays for REG1P
Primer
Products: |  | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for REG1P
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat REG1P | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat REG1P | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat REG1P | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for REG1P |
Orthologs
for REG1P gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
--
ENSEMBL Gene Tree for REG1P (if available)
TreeFam Gene Tree for REG1P (if available) |
Paralogs
for REG1P gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| -- |
Genomic Variants
for REG1P gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 2 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for REG1P (79362629 - 79365553 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for REG1P: -- | SABiosciences Cancer Mutation PCR Assays |
|
Disorders
/ Diseases
for REG1P gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
REG1P for disorders About GeneDecksing
1  disease for REG1P: About MalaCardspancreatitis
Export disorders for REG1P gene to outside databases
|
Publications
for REG1P gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for REG1P gene integrated from 9 sources:
(articles sorted by number of sources associating them with REG1P) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Human regeneration protein/lithostathine genes map to chromosome 2p12. (PubMed id 8333731)1, 3 Gharib B....Berge-lefranc J.L. (1993)
- Molecular cloning, expression and chromosomal localization of a novel human REG family gene, REG III. (PubMed id 15556304)1 Nata K.... Okamoto H. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1 Ota T.... Sugano S. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
- Human REG family genes are tandemly ordered in a 95-kilobase region of chromosome 2p12. (PubMed id 8549770)1 Miyashita H....Okamoto H. (1995)
|
External Searches for REG1P gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing REG1P gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing REG1P gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing REG1P gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for REG1P | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for REG1P gene:
Search GeneIP for patents involving REG1P
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for REG1P gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section
|
 | |
 |
| | | | |
 |
 |
|  | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat REG1P | | | Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing REG1P | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat REG1P | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat REG1P | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat REG1P | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat REG1P |
| |
 |  |  |  | |
| | | | Search Tocris compounds for REG1P |
| |  |  |  |  | | | | |
 |
 |
 |
 | | | REG1P Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for REG1P |
|  |  |  |  | | | | Search ThermoFisher Antibodies for REG1P |
| | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat REG1P |
| |  | |
|
|
|
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