Free for academic non-profit institutions. Other users need a Commercial license

Aliases for REEP5 Gene

Aliases for REEP5 Gene

  • Receptor Accessory Protein 5 2 3 5
  • Polyposis Locus Protein 1 2 3 4
  • Polyposis Coli Region Hypothetical Protein DP1 2 3
  • Deleted In Polyposis 1 2 3
  • C5orf18 3 4
  • DP1 3 4
  • TB2 3 4
  • Receptor Expression-Enhancing Protein 5 3
  • Chromosome 5 Open Reading Frame 18 2
  • Protein TB2 4
  • D5S346 3
  • Yip2e 3
  • YOP1 3

External Ids for REEP5 Gene

Previous HGNC Symbols for REEP5 Gene

  • C5orf18

Previous GeneCards Identifiers for REEP5 Gene

  • GC05M112240
  • GC05M112212
  • GC05M107391

Summaries for REEP5 Gene

GeneCards Summary for REEP5 Gene

REEP5 (Receptor Accessory Protein 5) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. An important paralog of this gene is REEP6.

UniProtKB/Swiss-Prot for REEP5 Gene

  • May promote functional cell surface expression of olfactory receptors.

Gene Wiki entry for REEP5 Gene

Additional gene information for REEP5 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for REEP5 Gene

Genomics for REEP5 Gene

Regulatory Elements for REEP5 Gene

Enhancers for REEP5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H112920 1.3 ENCODE dbSUPER 15.8 -0.4 -380 5 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF548 SRP19 YTHDC2 REEP5 ENSG00000251187 GC05P112932
GH05H112737 1.1 ENCODE 11.8 +184.6 184629 1 HNRNPUL1 HDGF PKNOX1 ATF1 ARNT ARID4B SIN3A ZNF2 YY1 GLIS2 REEP5 YTHDC2 APC CBX3P3
GH05H112706 1.1 ENCODE 10.7 +214.5 214488 3 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 SP3 REEP5 YTHDC2 RNU6-482P CBX3P3 APC ZRSR1
GH05H112882 0.8 FANTOM5 14.3 +39.3 39261 0 HDAC1 PKNOX1 MTA2 SOX6 TAL1 MNT TCF12 HDAC2 GATA2 SCRT2 SRP19 REEP5 APC XBP1P1 GC05P112886 ENSG00000272869
GH05H112683 1.1 FANTOM5 Ensembl ENCODE 9.9 +237.4 237433 2 PKNOX1 BMI1 EBF1 JUND IKZF1 MAFK IKZF2 SPI1 ZRSR1 REEP5 DCP2 LOC102467216 APC
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around REEP5 on UCSC Golden Path with GeneCards custom track

Promoters for REEP5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000185360 939 2001 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 SP3

Genomic Location for REEP5 Gene

Chromosome:
5
Start:
112,876,379 bp from pter
End:
112,922,539 bp from pter
Size:
46,161 bases
Orientation:
Minus strand

Genomic View for REEP5 Gene

Genes around REEP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
REEP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for REEP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for REEP5 Gene

Proteins for REEP5 Gene

  • Protein details for REEP5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q00765-REEP5_HUMAN
    Recommended name:
    Receptor expression-enhancing protein 5
    Protein Accession:
    Q00765
    Secondary Accessions:
    • B7Z681
    • D3DT04
    • Q04198
    • Q5QGT0
    • Q9BWH9

    Protein attributes for REEP5 Gene

    Size:
    189 amino acids
    Molecular mass:
    21493 Da
    Quaternary structure:
    • Interacts with ATL1 (By similarity). Interacts with ATL2 (PubMed:19665976). Interacts with ZFYVE27 (PubMed:23969831).
    SequenceCaution:
    • Sequence=AAA60136.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=AAA66351.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=AAH65926.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for REEP5 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for REEP5 Gene

Post-translational modifications for REEP5 Gene

  • Ubiquitination at isoforms=216, isoforms=147, and Lys157
  • Modification sites at PhosphoSitePlus

Other Protein References for REEP5 Gene

No data available for DME Specific Peptides for REEP5 Gene

Domains & Families for REEP5 Gene

Gene Families for REEP5 Gene

Protein Domains for REEP5 Gene

Graphical View of Domain Structure for InterPro Entry

Q00765

UniProtKB/Swiss-Prot:

REEP5_HUMAN :
  • Belongs to the DP1 family.
Family:
  • Belongs to the DP1 family.
genes like me logo Genes that share domains with REEP5: view

Function for REEP5 Gene

Molecular function for REEP5 Gene

UniProtKB/Swiss-Prot Function:
May promote functional cell surface expression of olfactory receptors.

Phenotypes From GWAS Catalog for REEP5 Gene

Gene Ontology (GO) - Molecular Function for REEP5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
GO:0005515 protein binding IPI 16762630
genes like me logo Genes that share ontologies with REEP5: view
genes like me logo Genes that share phenotypes with REEP5: view

Animal Model Products

  • Taconic Biosciences Mouse Models for REEP5

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for REEP5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for REEP5 Gene

Localization for REEP5 Gene

Subcellular locations from UniProtKB/Swiss-Prot for REEP5 Gene

Membrane; Multi-pass membrane protein. Endoplasmic reticulum. Note=Localizes to endoplasmic reticulum tubular network. {ECO:0000269 PubMed:23969831}.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for REEP5 gene
Compartment Confidence
extracellular 5
endoplasmic reticulum 5
cytosol 3
nucleus 2
plasma membrane 1
cytoskeleton 1
peroxisome 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Endoplasmic reticulum (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for REEP5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005783 endoplasmic reticulum IEA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
GO:0070062 extracellular exosome IDA 23376485
GO:0071782 endoplasmic reticulum tubular network IDA 23969831
genes like me logo Genes that share ontologies with REEP5: view

Pathways & Interactions for REEP5 Gene

genes like me logo Genes that share pathways with REEP5: view

Pathways by source for REEP5 Gene

Gene Ontology (GO) - Biological Process for REEP5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with REEP5: view

No data available for SIGNOR curated interactions for REEP5 Gene

Drugs & Compounds for REEP5 Gene

(4) Drugs for REEP5 Gene - From: PharmGKB

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Citalopram Approved Pharma 520
Fluoxetine Approved, Vet_approved Pharma Channel blocker 243
Paroxetine Approved, Investigational Pharma Inhibition, Inhibitor 234
Sertraline Approved Pharma Inhibition, Inhibitor 304
genes like me logo Genes that share compounds with REEP5: view

Transcripts for REEP5 Gene

Unigene Clusters for REEP5 Gene

Receptor accessory protein 5:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for REEP5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for REEP5 Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b
SP1: - - - -
SP2: - - - - -
SP3: - - -
SP4:
SP5: -

Relevant External Links for REEP5 Gene

GeneLoc Exon Structure for
REEP5
ECgene alternative splicing isoforms for
REEP5

Expression for REEP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for REEP5 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for REEP5 Gene

This gene is overexpressed in Nasal epithelium (11.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for REEP5 Gene



Protein tissue co-expression partners for REEP5 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of REEP5 Gene:

REEP5

SOURCE GeneReport for Unigene cluster for REEP5 Gene:

Hs.429608

mRNA Expression by UniProt/SwissProt for REEP5 Gene:

Q00765-REEP5_HUMAN
Tissue specificity: Expressed in circumvallate papillae and testis.

Evidence on tissue expression from TISSUES for REEP5 Gene

  • Nervous system(5)
  • Skin(4.5)
  • Liver(4.3)
  • Eye(4.2)
  • Kidney(3.5)
  • Intestine(2.9)
  • Lung(2.8)
  • Blood(2.1)
  • Thyroid gland(2.1)
  • Lymph node(2)
genes like me logo Genes that share expression patterns with REEP5: view

Primer Products

No data available for mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for REEP5 Gene

Orthologs for REEP5 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for REEP5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia REEP5 33 34
  • 99.82 (n)
mouse
(Mus musculus)
Mammalia Reep5 33 16 34
  • 90.48 (n)
cow
(Bos Taurus)
Mammalia REEP5 33 34
  • 89.77 (n)
dog
(Canis familiaris)
Mammalia LOC479137 33
  • 89.25 (n)
REEP5 34
  • 75 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia REEP5 34
  • 89 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Reep5 33
  • 88.89 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia REEP5 34
  • 59 (a)
OneToOne
chicken
(Gallus gallus)
Aves REEP5 33 34
  • 80.78 (n)
lizard
(Anolis carolinensis)
Reptilia REEP5 34
  • 81 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia reep5 33
  • 74.96 (n)
Str.6213 33
zebrafish
(Danio rerio)
Actinopterygii reep5 33 34 34
  • 71.12 (n)
-- 33
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.8928 33
fruit fly
(Drosophila melanogaster)
Insecta CG8331 33 34
  • 58.8 (n)
CG4960 34
  • 41 (a)
ManyToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP004819 33
  • 55.49 (n)
worm
(Caenorhabditis elegans)
Secernentea yop-1 33 34
  • 53.33 (n)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0E06601g 33
  • 46.93 (n)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes YOP1 33 34 36
  • 46.09 (n)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_ADR063W 33
  • 45.9 (n)
bread mold
(Neurospora crassa)
Ascomycetes NCU06702 33
  • 55.06 (n)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes yop1 33
  • 50.97 (n)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.11316 34
  • 48 (a)
OneToMany
Species where no ortholog for REEP5 was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for REEP5 Gene

ENSEMBL:
Gene Tree for REEP5 (if available)
TreeFam:
Gene Tree for REEP5 (if available)

Paralogs for REEP5 Gene

Paralogs for REEP5 Gene

(4) SIMAP similar genes for REEP5 Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with REEP5: view

Variants for REEP5 Gene

Sequence variations from dbSNP and Humsavar for REEP5 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs1000001302 -- 112,907,516(+) GGTGA(A/G)CAGCA intron-variant
rs1000051314 -- 112,895,273(+) GTGGG(A/G)TGTGT intron-variant
rs1000138368 -- 112,910,827(+) CTACT(C/T)ACCCA intron-variant
rs1000168520 -- 112,917,242(+) TCTAA(C/T)ATTGG intron-variant
rs1000200103 -- 112,917,480(+) ATAGA(C/G)ATTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for REEP5 Gene

Variant ID Type Subtype PubMed ID
esv2667456 CNV deletion 23128226
esv26872 CNV loss 19812545
esv2730601 CNV deletion 23290073
esv2763866 CNV loss 21179565
esv3566464 CNV deletion 23714750
esv3570349 CNV loss 25503493
esv3606302 CNV loss 21293372
nsv4960 CNV deletion 18451855
nsv599394 CNV gain 21841781
nsv968976 CNV duplication 23825009

Variation tolerance for REEP5 Gene

Residual Variation Intolerance Score: 43.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.16; 39.19% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for REEP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
REEP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for REEP5 Gene

Disorders for REEP5 Gene

Relevant External Links for REEP5

Genetic Association Database (GAD)
REEP5
Human Genome Epidemiology (HuGE) Navigator
REEP5
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
REEP5

No disorders were found for REEP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for REEP5 Gene

Publications for REEP5 Gene

  1. RTP family members induce functional expression of mammalian odorant receptors. (PMID: 15550249) Saito H … Matsunami H (Cell 2004) 2 3 4 60
  2. Protrudin binds atlastins and endoplasmic reticulum-shaping proteins and regulates network formation. (PMID: 23969831) Chang J … Blackstone C (Proceedings of the National Academy of Sciences of the United States of America 2013) 3 4 60
  3. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey SD … DREAM investigators (Diabetes care 2010) 3 45 60
  4. Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies. (PMID: 18839057) Lesch KP … Jacob C (Journal of neural transmission (Vienna, Austria : 1996) 2008) 3 45 60
  5. Inherited ACTH insensitivity illuminates the mechanisms of ACTH action. (PMID: 16271481) Clark AJ … Huebner A (Trends in endocrinology and metabolism: TEM 2005) 2 3 60

Products for REEP5 Gene

Sources for REEP5 Gene

Content
Loading form....