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RCN1P1 Gene(Pseudogene)

Reticulocalbin 1 Pseudogene 1

GCID:
GC06M087121
GIFtS:
8
Genes Participants
UDN Logo

Aliases for RCN1P1 Gene

Aliases for RCN1P1 Gene

  • Reticulocalbin 1 Pseudogene 1 2 3 5
  • Reticulocalbin 1, EF-Hand Calcium Binding Domain Pseudogene 1 2

External Ids for RCN1P1 Gene

Previous GeneCards Identifiers for RCN1P1 Gene

  • GC06M087833

Summaries for RCN1P1 Gene

GeneCards Summary for RCN1P1 Gene

RCN1P1 (Reticulocalbin 1 Pseudogene 1) is a Pseudogene.

Additional gene information for RCN1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RCN1P1 Gene

Genomics for RCN1P1 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RCN1P1 Gene

Promoters and enhancers for RCN1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06I087139 Enhancer 0.7 ENCODE 0.4 -16.7 -16740 0.1 CTCF ZNF2 RAD21 RFX5 GATA3 ZNF316 SCRT2 SMC3 ZNF143 BCLAF1 CGA PIR41626 RCN1P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RCN1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RCN1P1 Gene

Genomic Locations for RCN1P1 Gene
chr6:87,121,693-87,122,688
(GRCh38/hg38)
Size:
996 bases
Orientation:
Minus strand
chr6:87,831,411-87,832,406
(GRCh37/hg19)

Genomic View for RCN1P1 Gene

Genes around RCN1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RCN1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RCN1P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RCN1P1 Gene

Proteins for RCN1P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RCN1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RCN1P1 Gene

Domains & Families for RCN1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RCN1P1 Gene

Function for RCN1P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RCN1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RCN1P1 Gene

Localization for RCN1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RCN1P1 Gene

Pathways & Interactions for RCN1P1 Gene

SuperPathways for RCN1P1 Gene

PathCards logo More details on SuperPathways for RCN1P1
No Data Available

Interacting Proteins for RCN1P1 Gene

Gene Ontology (GO) - Biological Process for RCN1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RCN1P1 Gene

Drugs & Compounds for RCN1P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RCN1P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RCN1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RCN1P1 Gene

No ASD Table

Relevant External Links for RCN1P1 Gene

GeneLoc Exon Structure for
RCN1P1
ECgene alternative splicing isoforms for
RCN1P1

Expression for RCN1P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RCN1P1 Gene

mRNA expression in normal human tissues for RCN1P1 Gene
mRNA expression by GTEx for RCN1P1 Gene

mRNA differential expression in normal tissues according to GTEx for RCN1P1 Gene

This gene is overexpressed in Testis (x50.8).

NURSA nuclear receptor signaling pathways regulating expression of RCN1P1 Gene:

RCN1P1
genes like me logo Genes that share expression patterns with RCN1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RCN1P1 Gene

Orthologs for RCN1P1 Gene

Evolution for RCN1P1 Gene

ENSEMBL:
Gene Tree for RCN1P1 (if available)
TreeFam:
Gene Tree for RCN1P1 (if available)

No data available for Orthologs for RCN1P1 Gene

Paralogs for RCN1P1 Gene

No data available for Paralogs for RCN1P1 Gene

Variants for RCN1P1 Gene

Additional Variant Information for RCN1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RCN1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RCN1P1 Gene

Disorders for RCN1P1 Gene

No disorders were found for RCN1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RCN1P1 Gene

Publications for RCN1P1 Gene

No publications were found for RCN1P1 Gene.

Products for RCN1P1 Gene

Sources for RCN1P1 Gene

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