Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RCAN3AS Gene

Subcategory (RNA class) for RCAN3AS Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for RCAN3AS Gene

  • RCAN3 Antisense 2 3

External Ids for RCAN3AS Gene

Previous GeneCards Identifiers for RCAN3AS Gene

  • GC01U903302

Summaries for RCAN3AS Gene

GeneCards Summary for RCAN3AS Gene

RCAN3AS (RCAN3 Antisense) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RCAN3AS Gene

Genomics for RCAN3AS Gene

Regulatory Elements for RCAN3AS Gene

Promoters for RCAN3AS Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RCAN3AS on UCSC Golden Path with GeneCards custom track

Genomic Location for RCAN3AS Gene

Chromosome:
1
Start:
24,496,333 bp from pter
End:
24,502,360 bp from pter
Size:
6,028 bases
Orientation:
Minus strand

Genomic View for RCAN3AS Gene

Genes around RCAN3AS on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RCAN3AS Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RCAN3AS Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RCAN3AS Gene

Proteins for RCAN3AS Gene

  • Protein details for RCAN3AS Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    E3W6F2
    Recommended name:
    HCG1812040
    Protein Accession:
    E3W6F2

    Protein attributes for RCAN3AS Gene

    Size:
    56 amino acids
    Molecular mass:
    6356 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RCAN3AS Gene

Proteomics data for RCAN3AS Gene at MOPED

Post-translational modifications for RCAN3AS Gene

No Post-translational modifications

No data available for DME Specific Peptides for RCAN3AS Gene

Domains & Families for RCAN3AS Gene

Protein Domains for RCAN3AS Gene

ProtoNet:

Suggested Antigen Peptide Sequences for RCAN3AS Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RCAN3AS: view

No data available for Gene Families and UniProtKB/Swiss-Prot for RCAN3AS Gene

Function for RCAN3AS Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RCAN3AS Gene

Localization for RCAN3AS Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RCAN3AS Gene

Pathways & Interactions for RCAN3AS Gene

SuperPathways for RCAN3AS Gene

No Data Available

Interacting Proteins for RCAN3AS Gene

Gene Ontology (GO) - Biological Process for RCAN3AS Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RCAN3AS Gene

Drugs & Compounds for RCAN3AS Gene

No Compound Related Data Available

Transcripts for RCAN3AS Gene

mRNA/cDNA for RCAN3AS Gene

(5) Additional mRNA sequences :

Unigene Clusters for RCAN3AS Gene

RCAN3 antisense:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RCAN3AS Gene

No ASD Table

Relevant External Links for RCAN3AS Gene

GeneLoc Exon Structure for
RCAN3AS
ECgene alternative splicing isoforms for
RCAN3AS

Expression for RCAN3AS Gene

SOURCE GeneReport for Unigene cluster for RCAN3AS Gene Hs.399958

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RCAN3AS Gene

Orthologs for RCAN3AS Gene

No data available for Orthologs and Evolution for RCAN3AS Gene

Paralogs for RCAN3AS Gene

No data available for Paralogs for RCAN3AS Gene

Variants for RCAN3AS Gene

Sequence variations from dbSNP and Humsavar for RCAN3AS Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs195713 -- 24,495,929(-) CCCTG(G/T)TAACA downstream-variant-500B
rs195714 -- 24,496,631(+) tgggc(A/G)tggtg intron-variant
rs195716 -- 24,499,476(+) aacag(A/G)gggga intron-variant
rs195717 -- 24,499,614(+) gcagc(A/G)accca intron-variant
rs10158817 -- 24,499,967(+) GTCCT(A/G/T)GGACT intron-variant

Relevant External Links for RCAN3AS Gene

HapMap Linkage Disequilibrium report
RCAN3AS

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RCAN3AS Gene

Disorders for RCAN3AS Gene

Relevant External Links for RCAN3AS

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RCAN3AS

No disorders were found for RCAN3AS Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RCAN3AS Gene

Publications for RCAN3AS Gene

  1. Complexity of Bidirectional Transcription and Alternative Splicing at Human RCAN3 Locus. (PMID: 21961037) Facchin F. … Canaider S. (PLoS ONE 2011) 2 3 67
  2. Human RCAN3 gene expression and cell growth in endothelial cells. (PMID: 21042787) Canaider S. … Perretti M. (Int. J. Mol. Med. 2010) 2 3

Products for RCAN3AS Gene

Sources for RCAN3AS Gene

Back to Top

Content