Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RBPMS-AS1 Gene

Subcategory (RNA class) for RBPMS-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RBPMS-AS1 Gene

  • RBPMS Antisense RNA 1 2 3 5
  • CTD-3107M8.4 3

External Ids for RBPMS-AS1 Gene

Previous GeneCards Identifiers for RBPMS-AS1 Gene

  • GC08M030239

Summaries for RBPMS-AS1 Gene

GeneCards Summary for RBPMS-AS1 Gene

RBPMS-AS1 (RBPMS Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBPMS-AS1 Gene

Genomics for RBPMS-AS1 Gene

Regulatory Elements for RBPMS-AS1 Gene

Promoters for RBPMS-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RBPMS-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RBPMS-AS1 Gene

Chromosome:
8
Start:
30,382,119 bp from pter
End:
30,385,401 bp from pter
Size:
3,283 bases
Orientation:
Minus strand

Genomic View for RBPMS-AS1 Gene

Genes around RBPMS-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RBPMS-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBPMS-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBPMS-AS1 Gene

Proteins for RBPMS-AS1 Gene

Post-translational modifications for RBPMS-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBPMS-AS1 Gene

Domains & Families for RBPMS-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RBPMS-AS1 Gene

Function for RBPMS-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RBPMS-AS1 Gene

Localization for RBPMS-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RBPMS-AS1 Gene

Pathways & Interactions for RBPMS-AS1 Gene

SuperPathways for RBPMS-AS1 Gene

No Data Available

Interacting Proteins for RBPMS-AS1 Gene

Gene Ontology (GO) - Biological Process for RBPMS-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RBPMS-AS1 Gene

Drugs & Compounds for RBPMS-AS1 Gene

No Compound Related Data Available

Transcripts for RBPMS-AS1 Gene

mRNA/cDNA for RBPMS-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RBPMS-AS1 Gene

No ASD Table

Relevant External Links for RBPMS-AS1 Gene

GeneLoc Exon Structure for
RBPMS-AS1
ECgene alternative splicing isoforms for
RBPMS-AS1

Expression for RBPMS-AS1 Gene

mRNA expression in normal human tissues for RBPMS-AS1 Gene

genes like me logo Genes that share expression patterns with RBPMS-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RBPMS-AS1 Gene

Orthologs for RBPMS-AS1 Gene

Evolution for RBPMS-AS1 Gene

ENSEMBL:
Gene Tree for RBPMS-AS1 (if available)
TreeFam:
Gene Tree for RBPMS-AS1 (if available)

No data available for Orthologs for RBPMS-AS1 Gene

Paralogs for RBPMS-AS1 Gene

No data available for Paralogs for RBPMS-AS1 Gene

Variants for RBPMS-AS1 Gene

Sequence variations from dbSNP and Humsavar for RBPMS-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs11781923 -- 30,381,911(+) ACCAC(A/G)CCCAG downstream-variant-500B
rs115594893 -- 30,382,419(+) TTGCT(C/T)GGGAA nc-transcript-variant
rs143914769 -- 30,382,144(+) TCAGA(-/TTCT)TTATT nc-transcript-variant
rs182987707 -- 30,382,240(+) CCTAA(A/G)TGAGG nc-transcript-variant
rs183337153 -- 30,381,956(+) CACCA(C/T)GTTAG downstream-variant-500B

Relevant External Links for RBPMS-AS1 Gene

HapMap Linkage Disequilibrium report
RBPMS-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RBPMS-AS1 Gene

Disorders for RBPMS-AS1 Gene

Relevant External Links for RBPMS-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RBPMS-AS1

No disorders were found for RBPMS-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RBPMS-AS1 Gene

Publications for RBPMS-AS1 Gene

  1. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3 67

Products for RBPMS-AS1 Gene

Sources for RBPMS-AS1 Gene

Back to Top

Content