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Aliases for RBPMS-AS1 Gene

Subcategory (RNA class) for RBPMS-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for RBPMS-AS1 Gene

  • RBPMS Antisense RNA 1 2 3
  • CTD-3107M8.4 3

External Ids for RBPMS-AS1 Gene

ORGUL Members for RBPMS-AS1 Gene

Previous GeneCards Identifiers for RBPMS-AS1 Gene

  • GC08M030239

Summaries for RBPMS-AS1 Gene

GeneCards Summary for RBPMS-AS1 Gene

RBPMS-AS1 (RBPMS Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBPMS-AS1 Gene

Genomics for RBPMS-AS1 Gene

Genomic Location for RBPMS-AS1 Gene

Start:
30,382,119 bp from pter
End:
30,385,401 bp from pter
Size:
3,283 bases
Orientation:
Minus strand

Genomic View for RBPMS-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RBPMS-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBPMS-AS1 Gene

No data available for Regulatory Elements for RBPMS-AS1 Gene

Proteins for RBPMS-AS1 Gene

Post-translational modifications for RBPMS-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBPMS-AS1 Gene

Domains for RBPMS-AS1 Gene

Gene Families for RBPMS-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RBPMS-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RBPMS-AS1 Gene

Function for RBPMS-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RBPMS-AS1 Gene

Localization for RBPMS-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RBPMS-AS1 Gene

Pathways for RBPMS-AS1 Gene

SuperPathways for RBPMS-AS1 Gene

No Data Available

Interacting Proteins for RBPMS-AS1 Gene

Gene Ontology (GO) - Biological Process for RBPMS-AS1 Gene

None

No data available for Pathways by source for RBPMS-AS1 Gene

Transcripts for RBPMS-AS1 Gene

mRNA/cDNA for RBPMS-AS1 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RBPMS-AS1
    • Block miRNA regulation of RBPMS-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for RBPMS-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for RBPMS-AS1 Gene

    No ASD Table

    Relevant External Links for RBPMS-AS1 Gene

    GeneLoc Exon Structure for
    RBPMS-AS1
    ECgene alternative splicing isoforms for
    RBPMS-AS1

    Expression for RBPMS-AS1 Gene

    mRNA expression in normal human tissues for RBPMS-AS1 Gene

    genes like me logo Genes that share expressions with RBPMS-AS1: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for RBPMS-AS1 Gene

    Orthologs for RBPMS-AS1 Gene

    Evolution for RBPMS-AS1 Gene

    ENSEMBL:
    Gene Tree for RBPMS-AS1 (if available)
    TreeFam:
    Gene Tree for RBPMS-AS1 (if available)

    No data available for Orthologs for RBPMS-AS1 Gene

    Paralogs for RBPMS-AS1 Gene

    No data available for Paralogs for RBPMS-AS1 Gene

    Variants for RBPMS-AS1 Gene

    Sequence variations from dbSNP and Humsavar for RBPMS-AS1 Gene

    SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
    rs11781923 -- 30,381,911(+) ACCAC(A/G)CCCAG downstream-variant-500B
    rs115594893 -- 30,382,419(+) TTGCT(C/T)GGGAA nc-transcript-variant
    rs143914769 -- 30,382,144(+) TCAGA(-/TTCT)TTATT nc-transcript-variant
    rs144215507 -- 30,382,233(+) ACCTG(A/C)TCCTA nc-transcript-variant
    rs182987707 -- 30,382,240(+) CCTAA(A/G)TGAGG nc-transcript-variant

    Relevant External Links for RBPMS-AS1 Gene

    HapMap Linkage Disequilibrium report
    RBPMS-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for RBPMS-AS1 Gene

    Disorders for RBPMS-AS1 Gene

    No disorders were found for RBPMS-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for RBPMS-AS1 Gene

    Publications for RBPMS-AS1 Gene

    1. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3

    Products for RBPMS-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate RBPMS-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for RBPMS-AS1
      • Block miRNA regulation of RBPMS-AS1 using miScript Target Protectors

      Sources for RBPMS-AS1 Gene

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