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Aliases for RBMY3AP Gene

Aliases for RBMY3AP Gene

  • RNA Binding Motif Protein, Y-Linked, Family 3, Member A Pseudogene 2 3
  • RNA Binding Motif Protein, Y Chromosome, Family 3 Pseudogene 3
  • RNA Binding Motif Protein, Y Chromosome, Family 4 Pseudogene 3
  • SPATA14 3
  • RBMY3P 3
  • RBMY4P 3

External Ids for RBMY3AP Gene

Previous GeneCards Identifiers for RBMY3AP Gene

  • GC0YU900217
  • GC0YM009062
  • GC0YM010041
  • GC0YM009449

Summaries for RBMY3AP Gene

GeneCards Summary for RBMY3AP Gene

RBMY3AP (RNA Binding Motif Protein, Y-Linked, Family 3, Member A Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBMY3AP Gene

Genomics for RBMY3AP Gene

Regulatory Elements for RBMY3AP Gene

Genomic Location for RBMY3AP Gene

Start:
9,610,571 bp from pter
End:
9,621,276 bp from pter
Size:
10,706 bases
Orientation:
Minus strand

Genomic View for RBMY3AP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RBMY3AP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBMY3AP Gene

Proteins for RBMY3AP Gene

Post-translational modifications for RBMY3AP Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBMY3AP Gene

Domains for RBMY3AP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RBMY3AP Gene

Function for RBMY3AP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RBMY3AP Gene

Localization for RBMY3AP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RBMY3AP Gene

Pathways for RBMY3AP Gene

SuperPathways for RBMY3AP Gene

No Data Available

Interacting Proteins for RBMY3AP Gene

Gene Ontology (GO) - Biological Process for RBMY3AP Gene

None

No data available for Pathways by source for RBMY3AP Gene

Transcripts for RBMY3AP Gene

mRNA/cDNA for RBMY3AP Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RBMY3AP

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RBMY3AP Gene

No ASD Table

Relevant External Links for RBMY3AP Gene

GeneLoc Exon Structure for
RBMY3AP
ECgene alternative splicing isoforms for
RBMY3AP

Expression for RBMY3AP Gene

mRNA expression in normal human tissues for RBMY3AP Gene

mRNA differential expression in normal tissues according to GTEx for RBMY3AP Gene

This gene is overexpressed in Testis (20.7), Brain - Caudate (basal ganglia) (18.0), and Brain - Putamen (basal ganglia) (14.3).

SOURCE GeneReport for Unigene cluster for RBMY3AP Gene Hs.404172

genes like me logo Genes that share expressions with RBMY3AP: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for RBMY3AP Gene

Orthologs for RBMY3AP Gene

Evolution for RBMY3AP Gene

ENSEMBL:
Gene Tree for RBMY3AP (if available)
TreeFam:
Gene Tree for RBMY3AP (if available)

No data available for Orthologs for RBMY3AP Gene

Paralogs for RBMY3AP Gene

No data available for Paralogs for RBMY3AP Gene

Variants for RBMY3AP Gene

Sequence variations from dbSNP and Humsavar for RBMY3AP Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs9786709 -- 9,611,016(+) ATAGT(A/C)AGAAG intron-variant
rs35567891 -- 9,610,745(+) AAATC(A/G)CCACA nc-transcript-variant
rs79336456 -- 9,614,133(+) TTATA(A/G)CAGCA intron-variant
rs111356287 -- 9,614,151(+) TAGTC(C/T)TTCAG intron-variant
rs112779560 -- 9,617,031(+) AAATA(A/G)TTTTG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RBMY3AP Gene

Variant ID Type Subtype PubMed ID
nsv7473 OTHER Inversion 18451855
nsv469840 CNV Loss 16826518
nsv471608 CNV Gain+Loss 15918152

Relevant External Links for RBMY3AP Gene

HapMap Linkage Disequilibrium report
RBMY3AP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RBMY3AP Gene

Disorders for RBMY3AP Gene

No disorders were found for RBMY3AP Gene.

No data available for UniProtKB/Swiss-Prot for RBMY3AP Gene

Publications for RBMY3AP Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 2 3
  2. Multiple functional copies of the RBM gene family, a spermatogenesis candidate on the human Y chromosome. (PMID: 9344660) Chai N.N. … Yen P.H. (Genomics 1997) 3

Products for RBMY3AP Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RBMY3AP
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for RBMY3AP
    • Block miRNA regulation of RBMY3AP using miScript Target Protectors

    Sources for RBMY3AP Gene

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