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Aliases for RBMS3-AS1 Gene

Subcategory (RNA class) for RBMS3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RBMS3-AS1 Gene

  • RBMS3 Antisense RNA 1 2 3 5
  • RBMS3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for RBMS3-AS1 Gene

Previous GeneCards Identifiers for RBMS3-AS1 Gene

  • GC00U933501
  • GC03M029969

Summaries for RBMS3-AS1 Gene

GeneCards Summary for RBMS3-AS1 Gene

RBMS3-AS1 (RBMS3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBMS3-AS1 Gene

Genomics for RBMS3-AS1 Gene

Regulatory Elements for RBMS3-AS1 Gene

Enhancers for RBMS3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F029971 0.9 Ensembl ENCODE 0.3 -38.5 -38453 1.8 CTCF ZNF654 TRIM22 CHD4 REST RAD21 GATA3 POU5F1 SMC3 GC03P029988 RBMS3-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RBMS3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RBMS3-AS1 Gene

Chromosome:
3
Start:
29,926,811 bp from pter
End:
29,934,156 bp from pter
Size:
7,346 bases
Orientation:
Minus strand

Genomic View for RBMS3-AS1 Gene

Genes around RBMS3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RBMS3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBMS3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBMS3-AS1 Gene

Proteins for RBMS3-AS1 Gene

Post-translational modifications for RBMS3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBMS3-AS1 Gene

Domains & Families for RBMS3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RBMS3-AS1 Gene

Function for RBMS3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RBMS3-AS1 Gene

Localization for RBMS3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RBMS3-AS1 Gene

Pathways & Interactions for RBMS3-AS1 Gene

SuperPathways for RBMS3-AS1 Gene

No Data Available

Interacting Proteins for RBMS3-AS1 Gene

Gene Ontology (GO) - Biological Process for RBMS3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RBMS3-AS1 Gene

Transcripts for RBMS3-AS1 Gene

mRNA/cDNA for RBMS3-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RBMS3-AS1 Gene

No ASD Table

Relevant External Links for RBMS3-AS1 Gene

GeneLoc Exon Structure for
RBMS3-AS1
ECgene alternative splicing isoforms for
RBMS3-AS1

Expression for RBMS3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RBMS3-AS1 Gene

genes like me logo Genes that share expression patterns with RBMS3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RBMS3-AS1 Gene

Orthologs for RBMS3-AS1 Gene

Evolution for RBMS3-AS1 Gene

ENSEMBL:
Gene Tree for RBMS3-AS1 (if available)
TreeFam:
Gene Tree for RBMS3-AS1 (if available)

No data available for Orthologs for RBMS3-AS1 Gene

Paralogs for RBMS3-AS1 Gene

No data available for Paralogs for RBMS3-AS1 Gene

Variants for RBMS3-AS1 Gene

Sequence variations from dbSNP and Humsavar for RBMS3-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10682087 -- 29,931,658(+) AAACA(-/AAACA)GTTGA intron-variant
rs10692798 -- 29,928,370(+) TTCTA(-/TCTT)AAAAA intron-variant
rs111537643 -- 29,929,949(+) AGCCA(G/T)TGGAA intron-variant
rs111889932 -- 29,929,063(+) GAAAA(A/G)ATATA intron-variant
rs111949539 -- 29,930,287(+) TTTCT(A/G)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RBMS3-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1010530 CNV gain 25217958
esv2725083 CNV deletion 23290073
esv2725082 CNV deletion 23290073
esv2725081 CNV deletion 23290073
esv2725080 CNV deletion 23290073

Relevant External Links for RBMS3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RBMS3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RBMS3-AS1 Gene

Disorders for RBMS3-AS1 Gene

Relevant External Links for RBMS3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RBMS3-AS1

No disorders were found for RBMS3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RBMS3-AS1 Gene

Publications for RBMS3-AS1 Gene

No publications were found for RBMS3-AS1 Gene.

Products for RBMS3-AS1 Gene

Sources for RBMS3-AS1 Gene

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