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Aliases for RBM8B Gene

Aliases for RBM8B Gene

  • RNA Binding Motif Protein 8B Pseudogene 2 3 5

External Ids for RBM8B Gene

Previous GeneCards Identifiers for RBM8B Gene

  • GC14U990458
  • GC14P058854
  • GC14P059934
  • GC14P060864

Summaries for RBM8B Gene

GeneCards Summary for RBM8B Gene

RBM8B (RNA Binding Motif Protein 8B Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBM8B Gene

Genomics for RBM8B Gene

Regulatory Elements for RBM8B Gene

Enhancers for RBM8B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G060734 1.1 ENCODE 9.7 +338.0 338009 3.1 HDGF PKNOX1 CREB3L1 ARNT ZFP64 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 SLC38A6 TRMT5 RBM8B RNU6-398P MNAT1 MAD2L1P1
GH14G059481 1.7 FANTOM5 ENCODE dbSUPER 5.7 -913.7 -913736 5.4 HDGF PKNOX1 FOXA2 CREB3L1 AGO1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 L3HYPDH JKAMP RBM8B GPR135
GH14G059405 1.4 FANTOM5 Ensembl ENCODE 4.7 -990.5 -990513 2.6 ELF3 SOX13 TFAP4 JUN RAD21 TCF12 GATA4 GATA2 NCOR1 HNF4G L3HYPDH JKAMP RTN1 DAAM1 RBM8B GC14P059386 PIR32681
GH14G059424 0.6 Ensembl ENCODE 5.4 -972.5 -972452 2.1 CTCF L3HYPDH JKAMP DAAM1 RBM8B PIR32681 GC14P059386
GH14G060356 0.4 ENCODE 0.3 -40.6 -40567 1.3 KLF1 EZH2 C14orf39 GC14P060353 RBM8B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RBM8B on UCSC Golden Path with GeneCards custom track

Promoters for RBM8B Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000069238 201 600 ZNF664 ZNF579

Genomic Location for RBM8B Gene

Chromosome:
14
Start:
60,397,699 bp from pter
End:
60,400,514 bp from pter
Size:
2,816 bases
Orientation:
Plus strand

Genomic View for RBM8B Gene

Genes around RBM8B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RBM8B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBM8B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM8B Gene

Proteins for RBM8B Gene

Post-translational modifications for RBM8B Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBM8B Gene

Domains & Families for RBM8B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RBM8B Gene

Function for RBM8B Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RBM8B Gene

Localization for RBM8B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RBM8B Gene

Pathways & Interactions for RBM8B Gene

SuperPathways for RBM8B Gene

No Data Available

Interacting Proteins for RBM8B Gene

Gene Ontology (GO) - Biological Process for RBM8B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RBM8B Gene

Transcripts for RBM8B Gene

mRNA/cDNA for RBM8B Gene

(18) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RBM8B Gene

No ASD Table

Relevant External Links for RBM8B Gene

GeneLoc Exon Structure for
RBM8B
ECgene alternative splicing isoforms for
RBM8B

Expression for RBM8B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RBM8B Gene

NURSA nuclear receptor signaling pathways regulating expression of RBM8B Gene:

RBM8B
genes like me logo Genes that share expression patterns with RBM8B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RBM8B Gene

Orthologs for RBM8B Gene

Evolution for RBM8B Gene

ENSEMBL:
Gene Tree for RBM8B (if available)
TreeFam:
Gene Tree for RBM8B (if available)

No data available for Orthologs for RBM8B Gene

Paralogs for RBM8B Gene

No data available for Paralogs for RBM8B Gene

Variants for RBM8B Gene

Relevant External Links for RBM8B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RBM8B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RBM8B Gene

Disorders for RBM8B Gene

No disorders were found for RBM8B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RBM8B Gene

Publications for RBM8B Gene

  1. Identification and structural analysis of human RBM8A and RBM8B: two highly conserved RNA-binding motif proteins that interact with OVCA1, a candidate tumor suppressor. (PMID: 11013075) Salicioni A.M. … Godwin A.K. (Genomics 2000) 2 3 64
  2. The genes encoding the type II gonadotropin-releasing hormone receptor and the ribonucleoprotein RBM8A in humans overlap in two genomic loci. (PMID: 11707068) Faurholm B. … Katz A.A. (Genomics 2001) 3 64

Products for RBM8B Gene

Sources for RBM8B Gene

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