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Aliases for RBM46 Gene

Aliases for RBM46 Gene

  • RNA Binding Motif Protein 46 2 3
  • Cancer/Testis Antigen 68 2 3 4
  • RNA-Binding Motif Protein 46 3 4
  • CT68 3 4
  • Probable RNA-Binding Protein 46 3

External Ids for RBM46 Gene

Previous GeneCards Identifiers for RBM46 Gene

  • GC04P155922
  • GC04P155702
  • GC04P151443

Summaries for RBM46 Gene

GeneCards Summary for RBM46 Gene

RBM46 (RNA Binding Motif Protein 46) is a Protein Coding gene. GO annotations related to this gene include RNA binding and nucleotide binding. An important paralog of this gene is HNRNPR.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBM46 Gene

Genomics for RBM46 Gene

Regulatory Elements for RBM46 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for RBM46 Gene

154,781,213 bp from pter
154,828,813 bp from pter
47,601 bases
Plus strand

Genomic View for RBM46 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RBM46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM46 Gene

Proteins for RBM46 Gene

  • Protein details for RBM46 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Probable RNA-binding protein 46
    Protein Accession:
    Secondary Accessions:
    • B3KWU8
    • B4DZ27

    Protein attributes for RBM46 Gene

    533 amino acids
    Molecular mass:
    60023 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for RBM46 Gene


neXtProt entry for RBM46 Gene

Proteomics data for RBM46 Gene at MOPED

Post-translational modifications for RBM46 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RBM46 Gene

Antibody Products

No data available for DME Specific Peptides for RBM46 Gene

Domains for RBM46 Gene

Gene Families for RBM46 Gene

Suggested Antigen Peptide Sequences for RBM46 Gene

Graphical View of Domain Structure for InterPro Entry



  • Contains 3 RRM (RNA recognition motif) domains.
  • Contains 3 RRM (RNA recognition motif) domains.
genes like me logo Genes that share domains with RBM46: view

Function for RBM46 Gene

Gene Ontology (GO) - Molecular Function for RBM46 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0003676 nucleic acid binding --
GO:0003723 RNA binding IEA --
genes like me logo Genes that share ontologies with RBM46: view

Animal Model Products

CRISPR Products

miRNA for RBM46 Gene

miRTarBase miRNAs that target RBM46

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RBM46

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targets and HOMER Transcription for RBM46 Gene

Localization for RBM46 Gene

Subcellular locations from

Jensen Localization Image for RBM46 Gene COMPARTMENTS Subcellular localization image for RBM46 gene
Compartment Confidence
nucleus 3
cytosol 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RBM46 Gene

Pathways for RBM46 Gene

SuperPathways for RBM46 Gene

No Data Available

Interacting Proteins for RBM46 Gene

Gene Ontology (GO) - Biological Process for RBM46 Gene


No data available for Pathways by source for RBM46 Gene

Transcripts for RBM46 Gene

Unigene Clusters for RBM46 Gene

RNA binding motif protein 46:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RBM46

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RBM46 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8 ^ 9
SP1: - - - -
SP2: - -

Relevant External Links for RBM46 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RBM46 Gene

mRNA expression in normal human tissues for RBM46 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for RBM46 Gene

This gene is overexpressed in Testis (43.2).

Protein differential expression in normal tissues for RBM46 Gene

This gene is overexpressed in Cervix (28.9), Testis (28.5), and Pancreatic juice (7.5).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for RBM46 Gene

SOURCE GeneReport for Unigene cluster for RBM46 Gene Hs.133095

genes like me logo Genes that share expressions with RBM46: view

Expression partners for RBM46 Gene

* - Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for RBM46 Gene

Orthologs for RBM46 Gene

This gene was present in the common ancestor of animals.

Orthologs for RBM46 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia RBM46 35
  • 94.5 (n)
  • 97 (a)
RBM46 36
  • 97 (a)
(Canis familiaris)
Mammalia RBM46 35
  • 95.62 (n)
  • 98.5 (a)
RBM46 36
  • 98 (a)
(Mus musculus)
Mammalia Rbm46 35
  • 90.46 (n)
  • 97.44 (a)
Rbm46 16
Rbm46 36
  • 96 (a)
(Pan troglodytes)
Mammalia RBM46 35
  • 99.5 (n)
  • 99.62 (a)
RBM46 36
  • 100 (a)
(Rattus norvegicus)
Mammalia Rbm46 35
  • 91.62 (n)
  • 97.37 (a)
(Monodelphis domestica)
Mammalia RBM46 36
  • 89 (a)
(Ornithorhynchus anatinus)
Mammalia RBM46 36
  • 88 (a)
(Gallus gallus)
Aves RBM46 35
  • 79.13 (n)
  • 79.91 (a)
RBM46 36
  • 79 (a)
(Anolis carolinensis)
Reptilia RBM46 36
  • 92 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100498620 35
  • 75.27 (n)
  • 75.14 (a)
Str.19533 35
(Danio rerio)
Actinopterygii rbm46 35
  • 64.06 (n)
  • 67.94 (a)
wufe11d09 35
rbm46 36
  • 63 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG17838 36
  • 25 (a)
(Caenorhabditis elegans)
Secernentea hrp-2 36
  • 26 (a)
Species with no ortholog for RBM46:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RBM46 Gene

Gene Tree for RBM46 (if available)
Gene Tree for RBM46 (if available)

Paralogs for RBM46 Gene

Paralogs for RBM46 Gene

(7) SIMAP similar genes for RBM46 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with RBM46: view

Variants for RBM46 Gene

Sequence variations from dbSNP and Humsavar for RBM46 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs34202228 -- 154,824,091(+) TTCTC(-/T)TTTTT intron-variant
rs34180171 -- 154,818,691(+) TATTT(-/CTTT)ATGGT intron-variant
rs34067010 -- 154,823,699(+) CTGAG(-/G)AAACC intron-variant
rs33947037 -- 154,809,068(+) AGATT(-/AGAC)TAAGA intron-variant
rs33918255 -- 154,798,768(+) TATTA(-/T)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RBM46 Gene

Variant ID Type Subtype PubMed ID
nsv820098 CNV Gain 19587683

Relevant External Links for RBM46 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RBM46 Gene

Disorders for RBM46 Gene

Relevant External Links for RBM46

Genetic Association Database (GAD)

No disorders were found for RBM46 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for RBM46 Gene

Publications for RBM46 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 48
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 48
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4

Products for RBM46 Gene

Sources for RBM46 Gene

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