Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RBM43P1 Gene

Subcategory (RNA class) for RBM43P1 Gene

lncRNA

Aliases for RBM43P1 Gene

  • RNA Binding Motif Protein 43 Pseudogene 1 2 3 5

External Ids for RBM43P1 Gene

ORGUL Members for RBM43P1 Gene

Summaries for RBM43P1 Gene

GeneCards Summary for RBM43P1 Gene

RBM43P1 (RNA Binding Motif Protein 43 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBM43P1 Gene

Genomics for RBM43P1 Gene

Regulatory Elements for RBM43P1 Gene

Enhancers for RBM43P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G069461 0.6 ENCODE 5 +9.9 9855 2.0 ZNF132 ATF3 GATA2 ZNF384 CEBPG FOS RBM43P1 LMOD3
GH03G069433 1 Ensembl ENCODE 0.3 +38.5 38457 0.3 ZBTB21 JUNB EP300 ZNF843 RFX5 OSR2 ZSCAN21 GATA3 ZNF366 ZNF692 RBM43P1 LMOD3
GH03G069409 1.3 Ensembl ENCODE dbSUPER 0.2 +62.3 62322 0.8 HDGF CTCF PKNOX1 MAX YBX1 ZNF2 RAD21 GATA2 ZSCAN5C ZNF143 RBM43P1 LMOD3
GH03G069410 1.1 Ensembl ENCODE dbSUPER 0.2 +60.7 60735 2.0 JUN HLF CEBPB CEBPG ZNF384 JUND ATF3 HNF4A FOS RBM43P1 LMOD3
GH03G069385 1.1 ENCODE dbSUPER 0.2 +86.4 86389 2.3 BMI1 RAD21 ZBTB40 ZNF335 GLIS2 GATA2 ZNF366 SCRT2 RELB IKZF2 RBM43P1 LMOD3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RBM43P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RBM43P1 Gene

Chromosome:
3
Start:
69,470,425 bp from pter
End:
69,472,532 bp from pter
Size:
2,108 bases
Orientation:
Minus strand

Genomic View for RBM43P1 Gene

Genes around RBM43P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RBM43P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBM43P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM43P1 Gene

Proteins for RBM43P1 Gene

Post-translational modifications for RBM43P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBM43P1 Gene

Domains & Families for RBM43P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RBM43P1 Gene

Function for RBM43P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RBM43P1 Gene

Localization for RBM43P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RBM43P1 Gene

Pathways & Interactions for RBM43P1 Gene

SuperPathways for RBM43P1 Gene

No Data Available

Interacting Proteins for RBM43P1 Gene

Gene Ontology (GO) - Biological Process for RBM43P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RBM43P1 Gene

Drugs & Compounds for RBM43P1 Gene

No Compound Related Data Available

Transcripts for RBM43P1 Gene

mRNA/cDNA for RBM43P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RBM43P1 Gene

No ASD Table

Relevant External Links for RBM43P1 Gene

GeneLoc Exon Structure for
RBM43P1
ECgene alternative splicing isoforms for
RBM43P1

Expression for RBM43P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RBM43P1 Gene

mRNA differential expression in normal tissues according to GTEx for RBM43P1 Gene

This gene is overexpressed in Thyroid (x12.1), Brain - Spinal cord (cervical c-1) (x5.3), Brain - Putamen (basal ganglia) (x4.5), and Brain - Substantia nigra (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of RBM43P1 Gene:

RBM43P1
genes like me logo Genes that share expression patterns with RBM43P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RBM43P1 Gene

Orthologs for RBM43P1 Gene

Evolution for RBM43P1 Gene

ENSEMBL:
Gene Tree for RBM43P1 (if available)
TreeFam:
Gene Tree for RBM43P1 (if available)

No data available for Orthologs for RBM43P1 Gene

Paralogs for RBM43P1 Gene

No data available for Paralogs for RBM43P1 Gene

Variants for RBM43P1 Gene

Relevant External Links for RBM43P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RBM43P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RBM43P1 Gene

Disorders for RBM43P1 Gene

No disorders were found for RBM43P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RBM43P1 Gene

Publications for RBM43P1 Gene

No publications were found for RBM43P1 Gene.

Products for RBM43P1 Gene

Sources for RBM43P1 Gene

Content
Loading form....