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Aliases for RBM41 Gene

Aliases for RBM41 Gene

  • RNA Binding Motif Protein 41 2 3 5
  • RNA-Binding Motif Protein 41 4

External Ids for RBM41 Gene

Previous GeneCards Identifiers for RBM41 Gene

  • GC0XM106194
  • GC0XM106307
  • GC0XM095932

Summaries for RBM41 Gene

GeneCards Summary for RBM41 Gene

RBM41 (RNA Binding Motif Protein 41) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding and nucleotide binding. An important paralog of this gene is RNPC3.

UniProtKB/Swiss-Prot for RBM41 Gene

  • May bind RNA.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBM41 Gene

Genomics for RBM41 Gene

Regulatory Elements for RBM41 Gene

Enhancers for RBM41 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RBM41 on UCSC Golden Path with GeneCards custom track

Promoters for RBM41 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RBM41 on UCSC Golden Path with GeneCards custom track

Genomic Location for RBM41 Gene

107,061,885 bp from pter
107,118,827 bp from pter
56,943 bases
Minus strand

Genomic View for RBM41 Gene

Genes around RBM41 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RBM41 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBM41 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM41 Gene

Proteins for RBM41 Gene

  • Protein details for RBM41 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    RNA-binding protein 41
    Protein Accession:
    Secondary Accessions:
    • Q5JSN7
    • Q5JSN8
    • Q9H8F7
    • Q9NV04

    Protein attributes for RBM41 Gene

    413 amino acids
    Molecular mass:
    47100 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for RBM41 Gene

    Alternative splice isoforms for RBM41 Gene


neXtProt entry for RBM41 Gene

Proteomics data for RBM41 Gene at MOPED

Post-translational modifications for RBM41 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RBM41 Gene

No data available for DME Specific Peptides for RBM41 Gene

Domains & Families for RBM41 Gene

Gene Families for RBM41 Gene

Protein Domains for RBM41 Gene

Suggested Antigen Peptide Sequences for RBM41 Gene

Graphical View of Domain Structure for InterPro Entry



  • Contains 1 RRM (RNA recognition motif) domain.
  • Contains 1 RRM (RNA recognition motif) domain.
genes like me logo Genes that share domains with RBM41: view

Function for RBM41 Gene

Molecular function for RBM41 Gene

UniProtKB/Swiss-Prot Function:
May bind RNA.

Gene Ontology (GO) - Molecular Function for RBM41 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0003676 nucleic acid binding IEA --
GO:0097157 pre-mRNA intronic binding IBA --
genes like me logo Genes that share ontologies with RBM41: view
genes like me logo Genes that share phenotypes with RBM41: view

Animal Model Products

miRNA for RBM41 Gene

miRTarBase miRNAs that target RBM41

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RBM41 Gene

Localization for RBM41 Gene

Subcellular locations from

Jensen Localization Image for RBM41 Gene COMPARTMENTS Subcellular localization image for RBM41 gene
Compartment Confidence
nucleus 5
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RBM41 Gene

Pathways & Interactions for RBM41 Gene

SuperPathways for RBM41 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RBM41 Gene


No data available for Pathways by source and SIGNOR curated interactions for RBM41 Gene

Drugs & Compounds for RBM41 Gene

No Compound Related Data Available

Transcripts for RBM41 Gene

Unigene Clusters for RBM41 Gene

RNA binding motif protein 41:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RBM41 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8a · 8b ^ 9
SP1: - -
SP2: -

Relevant External Links for RBM41 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RBM41 Gene

mRNA expression in normal human tissues for RBM41 Gene

Protein differential expression in normal tissues from HIPED for RBM41 Gene

This gene is overexpressed in Spinal cord (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for RBM41 Gene

SOURCE GeneReport for Unigene cluster for RBM41 Gene Hs.139053

genes like me logo Genes that share expression patterns with RBM41: view

Protein tissue co-expression partners for RBM41 Gene

- Elite partner

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RBM41 Gene

Orthologs for RBM41 Gene

This gene was present in the common ancestor of animals.

Orthologs for RBM41 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia RBM41 35
  • 94.35 (n)
  • 95.4 (a)
RBM41 36
  • 95 (a)
(Canis familiaris)
Mammalia RBM41 35
  • 95.3 (n)
  • 95.86 (a)
RBM41 36
  • 95 (a)
(Mus musculus)
Mammalia Rbm41 35
  • 89.02 (n)
  • 87.41 (a)
Rbm41 16
Rbm41 36
  • 84 (a)
(Pan troglodytes)
Mammalia RBM41 35
  • 99.84 (n)
  • 100 (a)
RBM41 36
  • 100 (a)
(Rattus norvegicus)
Mammalia Rbm41 35
  • 90.07 (n)
  • 88.38 (a)
(Monodelphis domestica)
Mammalia RBM41 36
  • 67 (a)
(Gallus gallus)
Aves RBM41 35
  • 62.85 (n)
  • 56.49 (a)
RBM41 36
  • 55 (a)
(Anolis carolinensis)
Reptilia RBM41 36
  • 39 (a)
(Danio rerio)
Actinopterygii rbm41 35
  • 53.55 (n)
  • 43.65 (a)
rbm41 36
  • 38 (a)
fruit fly
(Drosophila melanogaster)
Insecta Snp 36
  • 16 (a)
Species with no ortholog for RBM41:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RBM41 Gene

Gene Tree for RBM41 (if available)
Gene Tree for RBM41 (if available)

Paralogs for RBM41 Gene

Paralogs for RBM41 Gene

genes like me logo Genes that share paralogs with RBM41: view

Variants for RBM41 Gene

Sequence variations from dbSNP and Humsavar for RBM41 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs17850127 - 107,067,643(+) CCCAT(A/G)TAGTT reference, missense
rs747691774 -- 107,087,759(+) CCACC(A/G)CGCCC intron-variant
rs747725710 -- 107,067,562(+) TGTAG(C/T)ACATG reference, missense
rs747731161 -- 107,099,691(+) AAGGT(-/AC)ACACA intron-variant
rs747770050 -- 107,083,151(+) TATTA(C/T)TTTTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RBM41 Gene

Variant ID Type Subtype PubMed ID
esv2752312 CNV Gain 17911159
nsv519484 CNV Gain 19592680
esv2740376 CNV Deletion 23290073
nsv7026 CNV Loss 18451855
esv2675921 CNV Deletion 23128226

Variation tolerance for RBM41 Gene

Residual Variation Intolerance Score: 31.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.94; 19.43% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for RBM41 Gene

Disorders for RBM41 Gene

Relevant External Links for RBM41

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RBM41 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RBM41 Gene

Publications for RBM41 Gene

  1. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  4. Next-generation sequencing to generate interactome datasets. (PMID: 21516116) Yu H. … Vidal M. (Nat. Methods 2011) 3
  5. Tandem immunoprecipitation of phosphotyrosine-mass spectrometry (TIPY-MS) indicates C19ORF19 becomes tyrosine-phosphorylated and associated with activated epidermal growth factor receptor. (PMID: 18271526) Tong J. … Moran M.F. (J. Proteome Res. 2008) 3

Products for RBM41 Gene

Sources for RBM41 Gene