Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RBM34 Gene

Aliases for RBM34 Gene

  • RNA Binding Motif Protein 34 2 3
  • RNA-Binding Motif Protein 34 4
  • KIAA0117 4

External Ids for RBM34 Gene

Previous GeneCards Identifiers for RBM34 Gene

  • GC01M231489
  • GC01M233361
  • GC01M235294
  • GC01M205743

Summaries for RBM34 Gene

GeneCards Summary for RBM34 Gene

RBM34 (RNA Binding Motif Protein 34) is a Protein Coding gene. GO annotations related to this gene include RNA binding and nucleotide binding.

Gene Wiki entry for RBM34 Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBM34 Gene

Genomics for RBM34 Gene

Regulatory Elements for RBM34 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for RBM34 Gene

Start:
235,131,183 bp from pter
End:
235,161,457 bp from pter
Size:
30,275 bases
Orientation:
Minus strand

Genomic View for RBM34 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RBM34 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM34 Gene

Proteins for RBM34 Gene

  • Protein details for RBM34 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P42696-RBM34_HUMAN
    Recommended name:
    RNA-binding protein 34
    Protein Accession:
    P42696
    Secondary Accessions:
    • A8K8J7
    • Q8N2Z8
    • Q9H5A1

    Protein attributes for RBM34 Gene

    Size:
    430 amino acids
    Molecular mass:
    48565 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH29451.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAA07503.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAF85051.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for RBM34 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for RBM34 Gene

Proteomics data for RBM34 Gene at MOPED

Post-translational modifications for RBM34 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RBM34 Gene

Antibody Products

  • Santa Cruz Biotechnology (SCBT) Antibodies for RBM34

No data available for DME Specific Peptides for RBM34 Gene

Domains for RBM34 Gene

Gene Families for RBM34 Gene

HGNC:
  • RBM :RNA binding motif (RRM) containing

Protein Domains for RBM34 Gene

Suggested Antigen Peptide Sequences for RBM34 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P42696

UniProtKB/Swiss-Prot:

RBM34_HUMAN :
  • P42696
Domain:
  • Contains 2 RRM (RNA recognition motif) domains.
Family:
  • Belongs to the RRM RBM34 family.
genes like me logo Genes that share domains with RBM34: view

Function for RBM34 Gene

Gene Ontology (GO) - Molecular Function for RBM34 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0003676 nucleic acid binding --
GO:0044822 poly(A) RNA binding IDA 22658674
genes like me logo Genes that share ontologies with RBM34: view

Phenotypes for RBM34 Gene

GenomeRNAi human phenotypes for RBM34:
genes like me logo Genes that share phenotypes with RBM34: view

Animal Model Products

miRNA for RBM34 Gene

miRTarBase miRNAs that target RBM34

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RBM34

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for RBM34 Gene

Localization for RBM34 Gene

Subcellular locations from UniProtKB/Swiss-Prot for RBM34 Gene

Nucleus, nucleolus.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RBM34 Gene COMPARTMENTS Subcellular localization image for RBM34 gene
Compartment Confidence
nucleus 5

Gene Ontology (GO) - Cellular Components for RBM34 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005730 nucleolus IDA --
genes like me logo Genes that share ontologies with RBM34: view

Pathways for RBM34 Gene

SuperPathways for RBM34 Gene

No Data Available

Interacting Proteins for RBM34 Gene

Gene Ontology (GO) - Biological Process for RBM34 Gene

None

No data available for Pathways by source for RBM34 Gene

Transcripts for RBM34 Gene

Unigene Clusters for RBM34 Gene

RNA binding motif protein 34:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RBM34

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RBM34 Gene

No ASD Table

Relevant External Links for RBM34 Gene

GeneLoc Exon Structure for
RBM34
ECgene alternative splicing isoforms for
RBM34

Expression for RBM34 Gene

mRNA expression in normal human tissues for RBM34 Gene

Protein differential expression in normal tissues for RBM34 Gene

This gene is overexpressed in Lung (52.7) and Peripheral blood mononuclear cells (6.5).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for RBM34 Gene

SOURCE GeneReport for Unigene cluster for RBM34 Gene Hs.535224

genes like me logo Genes that share expressions with RBM34: view

Expression partners for RBM34 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RBM34 Gene

Orthologs for RBM34 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for RBM34 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia RBM34 35
  • 84.48 (n)
  • 77.78 (a)
RBM34 36
  • 76 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rbm34 35
  • 77.28 (n)
  • 71.43 (a)
Rbm34 16
Rbm34 36
  • 67 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia RBM34 35
  • 99.07 (n)
  • 97.91 (a)
RBM34 36
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rbm34 35
  • 76.91 (n)
  • 70.45 (a)
cow
(Bos Taurus)
Mammalia RBM34 36
  • 79 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia RBM34 36
  • 56 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RBM34 36
  • 56 (a)
OneToOne
chicken
(Gallus gallus)
Aves RBM34 35
  • 60.63 (n)
  • 56.27 (a)
RBM34 36
  • 50 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia RBM34 36
  • 49 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia rbm34 35
  • 57.39 (n)
  • 54.32 (a)
zebrafish
(Danio rerio)
Actinopterygii rbm34 35
  • 56.4 (n)
  • 53.97 (a)
rbm34 36
  • 44 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG12288 36
  • 23 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea F11A10.7 36
  • 29 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes NOP12 36
  • 27 (a)
OneToOne
Species with no ortholog for RBM34:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RBM34 Gene

ENSEMBL:
Gene Tree for RBM34 (if available)
TreeFam:
Gene Tree for RBM34 (if available)

Paralogs for RBM34 Gene

No data available for Paralogs for RBM34 Gene

Variants for RBM34 Gene

Sequence variations from dbSNP and Humsavar for RBM34 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1535405 -- 235,149,581(+) AGGTA(A/T)GGGAA intron-variant
rs2273741 -- 235,152,396(+) TCCAG(C/T)AATGA downstream-variant-500B, intron-variant
rs2295815 -- 235,160,983(+) TGGTG(C/T)TCGCC reference, synonymous-codon, nc-transcript-variant
rs4326690 -- 235,141,066(+) cttta(C/T)gtcta intron-variant
rs4459172 -- 235,133,623(+) TATGT(A/G)CAGTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RBM34 Gene

Variant ID Type Subtype PubMed ID
nsv508699 CNV Loss 20534489
esv275126 CNV Loss 21479260
esv2670623 CNV Deletion 23128226
esv2725296 CNV Deletion 23290073

Relevant External Links for RBM34 Gene

HapMap Linkage Disequilibrium report
RBM34

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RBM34 Gene

Disorders for RBM34 Gene

No disorders were found for RBM34 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for RBM34 Gene

Publications for RBM34 Gene

  1. Prediction of the coding sequences of unidentified human genes. III. The coding sequences of 40 new genes (KIAA0081-KIAA0120) deduced by analysis of cDNA clones from human cell line KG-1. (PMID: 7788527) Nagase T. … Nomura N. (DNA Res. 1995) 2 3 4
  2. Functional proteomic analysis of human nucleolus. (PMID: 12429849) Scherl A. … Diaz J.-J. (Mol. Biol. Cell 2002) 3 4
  3. Microarray analysis of differentially expressed genes in cells resistant to HIV-1. (PMID: 15134903) Kartvelishvili A. … Simm M. (Immunol. Lett. 2004) 2 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4

Products for RBM34 Gene

Sources for RBM34 Gene

Back to Top

Content