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Aliases for RBM26 Gene

Aliases for RBM26 Gene

  • RNA Binding Motif Protein 26 2 3
  • Acidic Rich RS Domain Containing 2 2 3
  • CTCL Tumor Antigen Se70-2 3 4
  • C13orf10 3 4
  • Cutaneous T-Cell Lymphoma Tumor Antigen Se70-2 3
  • Protein Phosphatase 1, Regulatory 132 3
  • Chromosome 13 Open Reading Frame 10 2
  • RNA-Binding Motif Protein 26 4
  • RNA-Binding Protein 26 3
  • Protein Phosphatase 1 2
  • Regulatory 132 2
  • PPP1R132 3
  • PRO1777 3
  • SE70-2 3
  • ZC3H17 3
  • ARRS2 3

External Ids for RBM26 Gene

Previous HGNC Symbols for RBM26 Gene

  • C13orf10

Previous GeneCards Identifiers for RBM26 Gene

  • GC13M078783
  • GC13M079888
  • GC13M060597

Summaries for RBM26 Gene

GeneCards Summary for RBM26 Gene

RBM26 (RNA Binding Motif Protein 26) is a Protein Coding gene. GO annotations related to this gene include RNA binding and nucleotide binding. An important paralog of this gene is RBM27.

Gene Wiki entry for RBM26 Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBM26 Gene

Genomics for RBM26 Gene

Regulatory Elements for RBM26 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for RBM26 Gene

Start:
79,311,824 bp from pter
End:
79,406,477 bp from pter
Size:
94,654 bases
Orientation:
Minus strand

Genomic View for RBM26 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RBM26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM26 Gene

Proteins for RBM26 Gene

  • Protein details for RBM26 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T8P6-RBM26_HUMAN
    Recommended name:
    RNA-binding protein 26
    Protein Accession:
    Q5T8P6
    Secondary Accessions:
    • B4DZE0
    • Q2NKM2
    • Q2NKQ2
    • Q5CZH8
    • Q5T8P5
    • Q5T8P8
    • Q5U5P5
    • Q5W0G7
    • Q8N3H5
    • Q96K92
    • Q96SZ3
    • Q9H2F8
    • Q9H7F9
    • Q9P1G7

    Protein attributes for RBM26 Gene

    Size:
    1007 amino acids
    Molecular mass:
    113597 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAG34912.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAB14933.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAB55125.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=CAI12921.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=CAI95136.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for RBM26 Gene

neXtProt entry for RBM26 Gene

Proteomics data for RBM26 Gene at MOPED

Post-translational modifications for RBM26 Gene

  • Ubiquitination at Lys71 and Lys709
  • Modification sites at PhosphoSitePlus

Other Protein References for RBM26 Gene

No data available for DME Specific Peptides for RBM26 Gene

Domains for RBM26 Gene

Gene Families for RBM26 Gene

HGNC:
  • RBM :RNA binding motif (RRM) containing
  • ZC3H :Zinc fingers, CCCH-type domain containing

Protein Domains for RBM26 Gene

Suggested Antigen Peptide Sequences for RBM26 Gene

Graphical View of Domain Structure for InterPro Entry

Q5T8P6

UniProtKB/Swiss-Prot:

RBM26_HUMAN :
  • Q5T8P6
Domain:
  • Contains 2 RRM (RNA recognition motif) domains.
Similarity:
  • Contains 1 C3H1-type zinc finger.
genes like me logo Genes that share domains with RBM26: view

Function for RBM26 Gene

Gene Ontology (GO) - Molecular Function for RBM26 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0003676 nucleic acid binding --
GO:0005515 protein binding IPI 17577209
GO:0044822 poly(A) RNA binding IDA 22658674
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with RBM26: view

Animal Model Products

CRISPR Products

miRNA for RBM26 Gene

miRTarBase miRNAs that target RBM26

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RBM26

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for RBM26 Gene

Localization for RBM26 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RBM26 Gene COMPARTMENTS Subcellular localization image for RBM26 gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RBM26 Gene

Pathways for RBM26 Gene

SuperPathways for RBM26 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RBM26 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006397 mRNA processing IEA --
GO:0010923 negative regulation of phosphatase activity IDA 19389623
genes like me logo Genes that share ontologies with RBM26: view

No data available for Pathways by source for RBM26 Gene

Transcripts for RBM26 Gene

Unigene Clusters for RBM26 Gene

RNA binding motif protein 26:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RBM26

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RBM26 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8a · 8b ^ 9 ^ 10a · 10b · 10c ^ 11a · 11b · 11c · 11d ^ 12a · 12b · 12c ^ 13 ^ 14a ·
SP1: - - -
SP2: - -
SP3:
SP4:
SP5: -
SP6:
SP7:
SP8:
SP9:
SP10:
SP11: -
SP12:
SP13:
SP14:
SP15:
SP16:

ExUns: 14b ^ 15a · 15b · 15c ^ 16 ^ 17a · 17b · 17c ^ 18a · 18b ^ 19 ^ 20a · 20b ^ 21a · 21b · 21c · 21d ^ 22 ^ 23a · 23b ^ 24a · 24b
SP1: - - - - - -
SP2: - - - - -
SP3: - -
SP4: -
SP5:
SP6: -
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15: - - -
SP16: -

Relevant External Links for RBM26 Gene

GeneLoc Exon Structure for
RBM26
ECgene alternative splicing isoforms for
RBM26

Expression for RBM26 Gene

mRNA expression in normal human tissues for RBM26 Gene

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for RBM26 Gene

SOURCE GeneReport for Unigene cluster for RBM26 Gene Hs.558528

genes like me logo Genes that share expressions with RBM26: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RBM26 Gene

Orthologs for RBM26 Gene

This gene was present in the common ancestor of animals.

Orthologs for RBM26 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RBM26 35
  • 99.66 (n)
  • 99.79 (a)
RBM26 36
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RBM26 35
  • 95.34 (n)
  • 99.08 (a)
RBM26 36
  • 94 (a)
OneToOne
dog
(Canis familiaris)
Mammalia RBM26 35
  • 95.44 (n)
  • 99.18 (a)
RBM26 36
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rbm26 35
  • 91.63 (n)
  • 96.94 (a)
Rbm26 16
Rbm26 36
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia RBM26 36
  • 82 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RBM26 36
  • 88 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rbm26 35
  • 90.71 (n)
  • 96.12 (a)
chicken
(Gallus gallus)
Aves RBM26 35
  • 81.53 (n)
  • 87.42 (a)
RBM26 36
  • 87 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia RBM26 36
  • 86 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia MGC52868 35
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.2802 35
zebrafish
(Danio rerio)
Actinopterygii rbm26 35
  • 65.46 (n)
  • 70.04 (a)
RBM26 36
  • 68 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta swm 36
  • 25 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea B0336.3 36
  • 29 (a)
OneToMany
Species with no ortholog for RBM26:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RBM26 Gene

ENSEMBL:
Gene Tree for RBM26 (if available)
TreeFam:
Gene Tree for RBM26 (if available)

Paralogs for RBM26 Gene

Paralogs for RBM26 Gene

Selected SIMAP similar genes for RBM26 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with RBM26: view

Variants for RBM26 Gene

Sequence variations from dbSNP and Humsavar for RBM26 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
rs10767 - 79,344,700(+) TATCA(A/T)CNTGC missense, reference
rs15337 -- 79,320,093(+) CCCAT(A/G)TGGTA utr-variant-3-prime, intron-variant
rs1018633 -- 79,383,706(+) AAACA(C/T)ACGTT intron-variant
rs1022891 -- 79,383,682(+) GGGGA(A/G)CCAAT intron-variant
rs1044935 -- 79,344,752(-) ATAAT(A/C)CAGCT missense, reference

Structural Variations from Database of Genomic Variants (DGV) for RBM26 Gene

Variant ID Type Subtype PubMed ID
dgv1697n71 CNV Loss 21882294
nsv832657 CNV Gain 17160897
esv1133660 CNV Deletion 17803354
nsv64617 CNV Loss 16902084
nsv64406 CNV Loss 16902084
esv2747705 CNV Deletion 23290073
nsv64677 CNV Loss 16902084
nsv523979 CNV Loss 19592680

Relevant External Links for RBM26 Gene

HapMap Linkage Disequilibrium report
RBM26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RBM26 Gene

Disorders for RBM26 Gene

Relevant External Links for RBM26

Genetic Association Database (GAD)
RBM26
Human Genome Epidemiology (HuGE) Navigator
RBM26
genes like me logo Genes that share disorders with RBM26: view

No data available for UniProtKB/Swiss-Prot for RBM26 Gene

Publications for RBM26 Gene

  1. Serological detection of cutaneous T-cell lymphoma-associated antigens. (PMID: 11149944) Eichmueller S. … Schadendorf D. (Proc. Natl. Acad. Sci. U.S.A. 2001) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The DNA sequence and analysis of human chromosome 13. (PMID: 15057823) Dunham A. … Ross M.T. (Nature 2004) 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. A family of RS domain proteins with novel subcellular localization and trafficking. (PMID: 15741184) Kavanagh S.J. … Rathjen P.D. (Nucleic Acids Res. 2005) 2 3

Products for RBM26 Gene

Sources for RBM26 Gene

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