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Aliases for RBM24 Gene

Aliases for RBM24 Gene

  • RNA Binding Motif Protein 24 2 3
  • RNA-Binding Region (RNP1, RRM) Containing 6 2 3
  • RNA-Binding Region-Containing Protein 6 3 4
  • RNA-Binding Motif Protein 24 3 4
  • RNPC6 3 4
  • RNA-Binding Protein 24 3
  • DJ259A10.1 3

External Ids for RBM24 Gene

Previous HGNC Symbols for RBM24 Gene

  • RNPC6

Previous GeneCards Identifiers for RBM24 Gene

  • GC06P017390
  • GC06P017391

Summaries for RBM24 Gene

GeneCards Summary for RBM24 Gene

RBM24 (RNA Binding Motif Protein 24) is a Protein Coding gene. GO annotations related to this gene include nucleotide binding and mRNA 3-UTR binding. An important paralog of this gene is RBM38.

UniProtKB/Swiss-Prot for RBM24 Gene

  • Plays a role in myogenic differentiation by regulating MYOG levels. Binds to the 3-UTR of MYOG mRNA and regulates its stability.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBM24 Gene

Genomics for RBM24 Gene

Regulatory Elements for RBM24 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for RBM24 Gene

Start:
17,281,346 bp from pter
End:
17,293,875 bp from pter
Size:
12,530 bases
Orientation:
Plus strand

Genomic View for RBM24 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RBM24 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM24 Gene

Proteins for RBM24 Gene

  • Protein details for RBM24 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BX46-RBM24_HUMAN
    Recommended name:
    RNA-binding protein 24
    Protein Accession:
    Q9BX46
    Secondary Accessions:
    • E9PAY4
    • Q6QDA4
    • Q8N9D3
    • Q96NI3

    Protein attributes for RBM24 Gene

    Size:
    236 amino acids
    Molecular mass:
    24776 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC04474.1; Type=Miscellaneous discrepancy; Note=Unlikely isoform. Aberrant splice sites.; Evidence={ECO:0000305};

    Alternative splice isoforms for RBM24 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for RBM24 Gene

Proteomics data for RBM24 Gene at MOPED

Post-translational modifications for RBM24 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RBM24 Gene

No data available for DME Specific Peptides for RBM24 Gene

Domains for RBM24 Gene

Gene Families for RBM24 Gene

HGNC:
  • RBM :RNA binding motif (RRM) containing

Protein Domains for RBM24 Gene

Suggested Antigen Peptide Sequences for RBM24 Gene

Graphical View of Domain Structure for InterPro Entry

Q9BX46

UniProtKB/Swiss-Prot:

RBM24_HUMAN :
  • Q9BX46
Domain:
  • Contains 1 RRM (RNA recognition motif) domain.
genes like me logo Genes that share domains with RBM24: view

Function for RBM24 Gene

Molecular function for RBM24 Gene

UniProtKB/Swiss-Prot Function: Plays a role in myogenic differentiation by regulating MYOG levels. Binds to the 3-UTR of MYOG mRNA and regulates its stability.

Gene Ontology (GO) - Molecular Function for RBM24 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0003676 nucleic acid binding --
GO:0003730 mRNA 3-UTR binding ISS --
genes like me logo Genes that share ontologies with RBM24: view

Phenotypes for RBM24 Gene

GenomeRNAi human phenotypes for RBM24:
genes like me logo Genes that share phenotypes with RBM24: view

Animal Model Products

CRISPR Products

miRNA for RBM24 Gene

miRTarBase miRNAs that target RBM24

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RBM24

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for RBM24 Gene

Localization for RBM24 Gene

Subcellular locations from UniProtKB/Swiss-Prot for RBM24 Gene

Nucleus. Cytoplasm.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RBM24 Gene COMPARTMENTS Subcellular localization image for RBM24 gene
Compartment Confidence
nucleus 2
cytosol 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for RBM24 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with RBM24: view

Pathways for RBM24 Gene

SuperPathways for RBM24 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RBM24 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0010830 regulation of myotube differentiation ISS --
GO:0030154 cell differentiation IEA --
GO:0043488 regulation of mRNA stability ISS --
genes like me logo Genes that share ontologies with RBM24: view

No data available for Pathways by source for RBM24 Gene

Transcripts for RBM24 Gene

Unigene Clusters for RBM24 Gene

RNA binding motif protein 24:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RBM24

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for RBM24

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RBM24 Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6a · 6b
SP1: - -
SP2: - - -
SP3: - -
SP4: -

Relevant External Links for RBM24 Gene

GeneLoc Exon Structure for
RBM24
ECgene alternative splicing isoforms for
RBM24

Expression for RBM24 Gene

mRNA expression in normal human tissues for RBM24 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for RBM24 Gene

This gene is overexpressed in Muscle - Skeletal (20.0), Heart - Atrial Appendage (8.6), and Heart - Left Ventricle (7.7).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for RBM24 Gene

SOURCE GeneReport for Unigene cluster for RBM24 Gene Hs.519904

genes like me logo Genes that share expressions with RBM24: view

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for RBM24 Gene

Orthologs for RBM24 Gene

This gene was present in the common ancestor of animals.

Orthologs for RBM24 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RBM24 35
  • 99.86 (n)
  • 100 (a)
RBM24 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RBM24 35
  • 90.68 (n)
  • 99.58 (a)
RBM24 36
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia RBM24 35
  • 92.53 (n)
  • 94.74 (a)
RBM24 36
  • 90 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rbm24 35
  • 88.7 (n)
  • 98.73 (a)
Rbm24 16
Rbm24 36
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia RBM24 36
  • 90 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RBM24 36
  • 93 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rbm24 35
  • 88.14 (n)
  • 98.31 (a)
chicken
(Gallus gallus)
Aves RBM24 36
  • 96 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia RBM24 36
  • 98 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia MGC52530 35
tropical clawed frog
(Silurana tropicalis)
Amphibia MGC75808 35
rbm24 35
  • 80.24 (n)
  • 90.27 (a)
zebrafish
(Danio rerio)
Actinopterygii rbm24a 35
  • 71.76 (n)
  • 83.41 (a)
rbm24a 36
  • 86 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea sup-12 36
  • 44 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.10652 36
  • 50 (a)
OneToMany
Species with no ortholog for RBM24:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RBM24 Gene

ENSEMBL:
Gene Tree for RBM24 (if available)
TreeFam:
Gene Tree for RBM24 (if available)

Paralogs for RBM24 Gene

Paralogs for RBM24 Gene

Selected SIMAP similar genes for RBM24 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with RBM24: view

Variants for RBM24 Gene

Sequence variations from dbSNP and Humsavar for RBM24 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs864280 -- 17,290,388(+) ATATT(C/T)ATGGT intron-variant
rs1061550 -- 17,292,839(+) CATCA(A/C)TTGTG utr-variant-3-prime
rs1108512 -- 17,282,184(-) AAGGG(C/G)AACAG utr-variant-5-prime, intron-variant, upstream-variant-2KB
rs1772122 -- 17,290,304(-) ATACT(A/G)CGTGG intron-variant
rs1772123 -- 17,290,303(-) TACTA(C/T)GTGGT intron-variant

Relevant External Links for RBM24 Gene

HapMap Linkage Disequilibrium report
RBM24

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for RBM24 Gene

Disorders for RBM24 Gene

Relevant External Links for RBM24

Genetic Association Database (GAD)
RBM24
genes like me logo Genes that share disorders with RBM24: view

No data available for UniProtKB/Swiss-Prot for RBM24 Gene

Publications for RBM24 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions. (PMID: 15342556) Suzuki Y. … Sugano S. (Genome Res. 2004) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for RBM24 Gene

Sources for RBM24 Gene

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