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Aliases for RBM12B-AS1 Gene

Subcategory (RNA class) for RBM12B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for RBM12B-AS1 Gene

  • RBM12B Antisense RNA 1 2 3 4 5
  • RBM12B Antisense RNA 1 (Non-Protein Coding) 2 3
  • C8orf39 3 4
  • Chromosome 8 Open Reading Frame 39 2
  • RBM12B Antisense Gene Protein 1 4
  • PRO1905 3

External Ids for RBM12B-AS1 Gene

Previous HGNC Symbols for RBM12B-AS1 Gene

  • C8orf39

Previous GeneCards Identifiers for RBM12B-AS1 Gene

  • GC08P094754

Summaries for RBM12B-AS1 Gene

GeneCards Summary for RBM12B-AS1 Gene

RBM12B-AS1 (RBM12B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBM12B-AS1 Gene

Genomics for RBM12B-AS1 Gene

Regulatory Elements for RBM12B-AS1 Gene

Enhancers for RBM12B-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G093738 1.1 ENCODE 0.7 +0.1 111 3.4 HDGF CREB3L1 ARNT ZFP64 WRNIP1 ARID4B SIN3A DMAP1 ZBTB7B YY1 LOC105375645 VIRMA RBM12B RBM12B-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RBM12B-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for RBM12B-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for RBM12B-AS1 Gene

93,740,111 bp from pter
93,740,819 bp from pter
709 bases
Plus strand

Genomic View for RBM12B-AS1 Gene

Genes around RBM12B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RBM12B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBM12B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM12B-AS1 Gene

Proteins for RBM12B-AS1 Gene

  • Protein details for RBM12B-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein encoded by RBM12B-AS1
    Protein Accession:

    Protein attributes for RBM12B-AS1 Gene

    102 amino acids
    Molecular mass:
    11378 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RBM12B-AS1 Gene

Post-translational modifications for RBM12B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBM12B-AS1 Gene

Domains & Families for RBM12B-AS1 Gene

Protein Domains for RBM12B-AS1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RBM12B-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RBM12B-AS1 Gene

Function for RBM12B-AS1 Gene

Phenotypes for RBM12B-AS1 Gene

GenomeRNAi human phenotypes for RBM12B-AS1:
genes like me logo Genes that share phenotypes with RBM12B-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RBM12B-AS1 Gene

Localization for RBM12B-AS1 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for RBM12B-AS1 gene
Compartment Confidence
nucleus 3
mitochondrion 1
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RBM12B-AS1 Gene

Pathways & Interactions for RBM12B-AS1 Gene

SuperPathways for RBM12B-AS1 Gene

No Data Available

Interacting Proteins for RBM12B-AS1 Gene

Selected Interacting proteins: Q9P1G2-RBAS1_HUMAN for RBM12B-AS1 Gene via IID

Symbol External ID(s) Details

Gene Ontology (GO) - Biological Process for RBM12B-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for RBM12B-AS1 Gene

Drugs & Compounds for RBM12B-AS1 Gene

No Compound Related Data Available

Transcripts for RBM12B-AS1 Gene

mRNA/cDNA for RBM12B-AS1 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RBM12B-AS1 Gene

RBM12B antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RBM12B-AS1 Gene

No ASD Table

Relevant External Links for RBM12B-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RBM12B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RBM12B-AS1 Gene

Protein differential expression in normal tissues from HIPED for RBM12B-AS1 Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for RBM12B-AS1 Gene

Protein tissue co-expression partners for RBM12B-AS1 Gene

SOURCE GeneReport for Unigene cluster for RBM12B-AS1 Gene:

genes like me logo Genes that share expression patterns with RBM12B-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RBM12B-AS1 Gene

Orthologs for RBM12B-AS1 Gene

Evolution for RBM12B-AS1 Gene

Gene Tree for RBM12B-AS1 (if available)
Gene Tree for RBM12B-AS1 (if available)

No data available for Orthologs for RBM12B-AS1 Gene

Paralogs for RBM12B-AS1 Gene

No data available for Paralogs for RBM12B-AS1 Gene

Variants for RBM12B-AS1 Gene

Sequence variations from dbSNP and Humsavar for RBM12B-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1000019856 -- 93,739,968(+) TCATC(A/G)GATCC intron-variant, upstream-variant-2KB
rs1000436730 -- 93,741,060(+) CCACC(A/G)CCAAG downstream-variant-500B, upstream-variant-2KB
rs1001468709 -- 93,738,763(+) TGGAG(-/T)TAATT intron-variant, upstream-variant-2KB
rs1002509829 -- 93,739,629(+) TTACA(C/G/T)AAAAG intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1003906843 -- 93,740,075(+) CATGA(C/T)GTAGC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RBM12B-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1022473 CNV loss 25217958
nsv6309 CNV insertion 18451855
nsv831399 CNV loss 17160897

Variation tolerance for RBM12B-AS1 Gene

Gene Damage Index Score: 10.00; 89.99% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for RBM12B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RBM12B-AS1 Gene

Disorders for RBM12B-AS1 Gene

Relevant External Links for RBM12B-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RBM12B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RBM12B-AS1 Gene

Publications for RBM12B-AS1 Gene

  1. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4 64

Products for RBM12B-AS1 Gene

Sources for RBM12B-AS1 Gene

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