Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

RBKS Gene

protein-coding   GIFtS: 57
GCID: GC02M028004

ribokinase

 Explore 2 diseases affiliated with
RBKS via our new
 Human Malady Compendium 
Biological research products
for RBKS
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Ribokinase1
RBSK1 2 3
DKFZp686G132681
5230400M11Rik2
EC 2.7.1.153

External Ids:    HGNC: 303251   Entrez Gene: 640802   Ensembl: ENSG000001711747   OMIM: 6111325   UniProtKB: Q9H4773   

Export aliases for RBKS gene to outside databases

Previous GC identifers: GC02M027978 GC02M027915 GC02M027857 GC02M027745


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for RBKS:
The ribokinase encoded by this gene belongs to the pfkB family of carbohydrate kinases. It phosphorylates ribose to
form ribose-5-phosphate in the presence of ATP and magnesium as a first step in ribose metabolism. (provided by
RefSeq, Jul 2008)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_022184.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the RBKS gene promoter:
         CREB   deltaCREB   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): RBKS promoter sequence
   Search SABiosciences Chromatin IP Primers for RBKS

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RBKS


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2p23.3   Ensembl cytogenetic band:  2p23.2   HGNC cytogenetic band: 2p23.3

RBKS Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RBKS gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02M028004:  view genomic region     (about GC identifiers)

Start:
28,004,231 bp from pter      End:
28,113,965 bp from pter
Size:
109,735 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: RBSK_HUMAN, Q9H477 (See protein sequence)
Recommended Name: Ribokinase  
Size: 322 amino acids; 34143 Da
1 PDB 3D structure from and Proteopedia for RBKS:
2FV7 (3D)    
Secondary accessions: A9UK04

Explore the universe of human proteins at neXtProt for RBKS: NX_Q9H477

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9H477

  • RBKS Protein expression data from MOPED and PaxDb:    About this image 
    RBKS Protein Expression
    REFSEQ proteins: NP_071411.1  
    ENSEMBL proteins: 
     ENSP00000306817   ENSP00000413789   ENSP00000393558   ENSP00000415975   ENSP00000413232  

    Human Recombinant Protein Products for RBKS: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: RBKS
    OriGene Protein Over-expression Lysate: RBKS
    OriGene Custom Protein Services for RBKS 
    GenScript Custom Purified and Recombinant Proteins Services for RBKS
    Novus Biologicals RBKS Proteins
    Novus Biologicals RBKS Lysates
    Browse Sino Biological Recombinant Proteins
    ProSpec Recombinant Protein for RBKS
    Uscn Proteins for RBKS


    RBKS Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for RBKS 
    GenScript Custom Superior Antibodies Services for RBKS
    Novus Biologicals RBKS Antibodies
    Abcam antibodies for RBKS 
    Uscn Antibodies for RBKS
    ThermoFisher Antibodies for RBKS

    Assay Products for RBKS: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for RBKS
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for RBKS


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    RBKS for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR011611 PfkB_dom
     IPR011877 D_ribokin_bac
     IPR002139 Ribokinase
     IPR002173 Carboh/pur_kinase_PfkB_CS

    Graphical View of Domain Structure for InterPro Entry Q9H477

    ProtoNet protein and cluster: Q9H477

    2 Blocks protein families:
    IPB002139 Ribokinase signature
    IPB002173 Carbohydrate kinase


    UniProtKB/Swiss-Prot: RBSK_HUMAN, Q9H477
    Similarity: Belongs to the carbohydrate kinase PfkB family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: RBSK_HUMAN, Q9H477
    Catalytic activity: ATP + D-ribose = ADP + D-ribose 5-phosphate
    Enzyme regulation: Competitively inhibited by phosphonoacetic acid, etidronate, 2-carboxethylphosphonic acid,
    N-(phosphonomethyl)glycine, N-(phosphonomethyl)iminodiacetic acid and clodronate

         Enzyme Number (IUBMB): EC 2.7.1.151

         Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004747ribokinase activity IEA--
    GO:0005524ATP binding IEA--
         
    RBKS for ontologies           About GeneDecksing


    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for RBKS 

    miRNA
    Products:
        
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat RBKS
    1 QIAGEN miScript miRNA Assays for microRNA that regulate RBKS:
    hsa-miR-518a-5p
    SwitchGear 3'UTR luciferase reporter plasmidRBKS 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RBKS (see all 7)
    OriGene shRNA RFP: RBKS
    OriGene siRNA: RBKS
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RBKS
    Sirion Biotech Custom design and validation of potent shRNA sequences against RBKS 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for RBKS
    Sirion Biotech Customized adenovirus for overexpression of RBKS 
    Sirion Biotech Customized adenovirus for potent knockdown of RBKS

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RBKS (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RBKS
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: RBKS (NM_022128)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for RBKS
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RBKS 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for RBKS
    Search LifeMap BioReagents cell lines for RBKS
    Sirion Biotech Customized stable knockdown cell line services for RBKS 
    Sirion Biotech Customized inducible knockdown cell line services for RBKS
    Sirion Biotech Customized stable overexpressing cell line services for RBKS
    Sirion Biotech Customized inducible overexpressing cell line services for RBKS

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RBKS


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Pentose phosphate pathway
    Pentose phosphate pathway1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways



    1         Kegg Pathway  (Kegg details for RBKS):
        Pentose phosphate pathway

    UniProtKB/Swiss-Prot: RBSK_HUMAN, Q9H477
    Pathway: Carbohydrate metabolism; D-ribose degradation; D-ribose 5-phosphate from beta-D-ribopyranose: step 2/2


    RBKS for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for RBKS

    STRING Interaction Network Preview (showing 5 interactants - click image to see 15)

    5/45 Interacting proteins for RBKS (Q9H4773 ENSP000003068174) via UniProtKB, MINT, STRING, and/or I2D (see all 45)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    ADI1Q9BV573, ENSP000003336664I2D: score=1 STRING: ENSP00000333666
    SRRQ9GZT43, ENSP000003394354I2D: score=1 STRING: ENSP00000339435
    CATP040403, ENSP000002410524I2D: score=1 STRING: ENSP00000241052
    ABATP804043I2D: score=1 
    ACO2Q997983I2D: score=1 
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006014D-ribose metabolic process ----
    GO:0019303D-ribose catabolic process IEA--

    RBKS for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    RBKS for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for RBKS

    8 HMDB Compounds for RBKS    About this table
    CompoundSynonyms CAS #PubMed Ids
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    D-Ribosed-Ribose (see all 11)50-69-1--
    D-Ribose 5-phosphateD-Ribose 5-phosphate (see all 11)3615-55-2--
    D-Ribulose 5-phosphateD-Ribulose 5-phosphate (see all 5)4151-19-3--
    Deoxyribose2'-Deoxy-D-ribose 533-67-5--
    Deoxyribose 1-phosphate2-deoxy-D-ribose-1-phosphate (see all 14)17210-42-3--
    Deoxyribose 5-phosphate2-deoxy-alpha-D-ribose 5-phosphate (see all 12)102916-66-5--
    4 Novoseek chemical compound relationships for RBKS gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    ribose 75.3 3 9843365 (1), 11563694 (1), 18560757 (1)
    pyridoxal 69.4 4 12235162 (3), 16600635 (1)
    vitamin b6 50.4 1 16600635 (1)
    atp 48.8 1 9843365 (1)

    Search CenterWatch for drugs/clinical trials and news about RBKS / RBSK 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for RBKS gene: 
    NM_022128.1  

    Unigene Cluster for RBKS:

    Ribokinase
    Hs.11916  [show with all ESTs]
    Unigene Representative Sequence: BX648909
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000302188(uc002rlo.1) ENST00000449378(uc010ezi.1) ENST00000458185
    ENST00000453412 ENST00000444339(uc010ymg.2)

    miRNA
    Products:
         
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat RBKS
    1 QIAGEN miScript miRNA Assays for microRNA that regulate RBKS:
    hsa-miR-518a-5p
    SwitchGear 3'UTR luciferase reporter plasmidRBKS 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RBKS (see all 7)
    OriGene shRNA RFP: RBKS
    OriGene siRNA: RBKS
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RBKS
    Sirion Biotech Custom design and validation of potent shRNA sequences against RBKS 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RBKS (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RBKS
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: RBKS (NM_022128)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for RBKS
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RBKS 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for RBKS
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat RBKS
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RBKS
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RBKS

    Additional cDNA sequence: 

    AJ404857.1 AK300989.1 AY643715.1 BC017425.1 BX648909.1 

    7 DOTS entries:

    DT.86841549  DT.99952795  DT.100772021  DT.101956972  DT.65287474  DT.100772013  DT.121024220 

    24/90 AceView cDNA sequences (see all 90):

    AI452781 CR609030 CD671167 BQ016020 BC014088 BE218181 CA434266 AI912209 
    H82519 AA860865 AJ404857 BE221723 BE501861 BM717190 NM_022128 BG697021 
    BG201690 BM714050 BU621759 AI203169 AV657234 CD671166 AA393609 CD515982 

    GeneLoc Exon Structure

    2 Alternative Splicing Database (ASD) splice patterns (SP) for RBKS    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9
    SP1:              -                                             
    SP2:                                                            


    ECgene alternative splicing isoforms for RBKS

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    RBKS expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTCAACAGAT
    RBKS Expression
    About this image

    RBKS expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Posterior foregut-like cells (A scalable, suspensi...)
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See RBKS Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for RBKS

    SOURCE GeneReport for Unigene cluster: Hs.11916
        SABiosciences Expression via Pathway-Focused PCR Array including RBKS: 
              Glucose Metabolism in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for RBKS
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat RBKS
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RBKS
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RBKS
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RBKS

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the last universal common ancestor (LUCA).

    Orthologs for RBKS gene from 10/33 species (see all 33)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Rbks1 , 5 ribokinase1, 5 85.82(n)1
    86.34(a)1
      5 (17.27 cM)5
    713361  NM_153196.11  NP_694876.11 
     316244395 
    chicken
    (Gallus gallus)
    Aves RBKS1 ribokinase 74.72(n)
    72.82(a)
      421418  XM_419471.3  XP_419471.3 
    lizard
    (Anolis carolinensis)
    Reptilia RBKS6
    --
    75(a)
    1 ↔ 1
    2(125468000-125518682)
    zebrafish
    (Danio rerio)
    Actinopterygii rbks1 ribokinase 65.47(n)
    67.32(a)
      415207  NM_001002117.1  NP_001002117.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG133691 CG13369 50.74(n)
    46.08(a)
      31007  NM_130494.3  NP_569850.1 
    worm
    (Caenorhabditis elegans)
    Secernentea F07A11.51 Protein F07A11.5 51.03(n)
    45.52(a)
      174781  NM_064082.3  NP_496483.1 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes RBK1(YCR036W)4
    RBK11
    Putative ribokinase4
    Rbk1p1
    44.22(n)1
    32.65(a)1
      3(193297-194298)4
    8504021, 4  NP_009965.21, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT1G171601 ribokinase 41.51(n)
    29.35(a)
      838287  NM_101577.4  NP_173159.1 
    rice
    (Oryza sativa)
    Liliopsida Os01g06654001 hypothetical protein 40.59(n)
    30.95(a)
      4326855  NM_001050331.1  NP_001043796.1 
    E. coli
    (Escherichia coli)
    Gamma proteobacteria rbsK6
    yihV6
    (see all 3)
    predicted sugar kinase
    (see all 3)
    34(a)
    27(a)
    (see all 3)
    1 ↔ 1
    possible ortholog
    (see all 3)
    Chromosome(3935317-3936246)
    Chromosome(4071762-4072658)


    ENSEMBL Gene Tree for RBKS (if available)
    TreeFam Gene Tree for RBKS (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1474 NCBI SNPs in RBKS are shown (see all 1474    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs352166181,2
    C--27793030(+) CAGTG-/TTTTTT 1 -- int11Minor allele frequency- T:0.00NA 2
    rs75666791,2
    C--28003811(+) gttatC/Gctccc 1 -- ds50010--------
    rs1170801401,2
    C--28004114(+) CAGCTG/CCCCCT 1 -- ds50011Minor allele frequency- C:0.01EA 120
    rs1142127071,2
    C,F--28004197(+) CCATAT/GGGTGC 1 -- ds50011Minor allele frequency- G:0.08WA 118
    rs1407365141,2
    --28004286(+) AATTCC/TGGTTG 1 -- ut310--------
    rs1150201911,2
    --28004329(+) ATCGTT/CATAAA 1 -- ut311Minor allele frequency- C:0.01WA 118
    rs1875240871,2
    --28004364(+) CGTAAA/CAGAAC 1 -- ut310--------
    rs1901282591,2
    --28004424(+) CAGGAA/GCAGCC 1 -- ut310--------
    rs1827271001,2
    C--28004465(+) TTTATA/TTTGGG 1 -- ut310--------
    rs1504259901,2
    C,F--28004583(+) GAGCAT/CGTCTT 2 /M /V mis11Minor allele frequency- C:0.00NA 4550

    HapMap Linkage Disequilibrium report for RBKS (28004231 - 28113965 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for RBKS
         1 CNV: 3347

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing RBKS
    DNA2.0 Custom Variant and Variant Library Synthesis for RBKS

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    RBKS for disorders           About GeneDecksing

    OMIM gene information: 611132    OMIM disorders: --

    2 diseases for RBKS:    About MalaCards
    tuberculosis    mycobacterium tuberculosis

    Human Genome Epidemiology (HuGE) Navigator: RBKS (1 document)

    Export disorders for RBKS gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for RBKS gene, integrated from 9 sources (see all 21):
    (articles sorted by number of sources associating them with RBKS)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification and characterization of human ribokinase and comparison of its properties with E. coli ribokinase and human adenosine kinase. (PubMed id 17585908)1, 2, 9 Park J.... Gupta R.S. (2007)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    3. Convergent evolution of similar enzymatic function on different protein folds: the hexokinase, ribokinase, and galactokinase families of sugar kinases. (PubMed id 8382990)1, 3 Bork P....Valencia A. (1993)
    4. Genome-wide YFP fluorescence complementation screen id entifies new regulators for telomere signaling in human cells. (PubMed id 21044950)1 Lee O.H....Songyang Z. (2011)
    5. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)1 Rose J.E....Uhl G.R. (2010)
    6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
    7. Hepatitis C virus core protein interacts with 14-3-3 protein and activates the kinase Raf-1. (PubMed id )2 Aoki H.... Hino O. (2000)
    8. Crystal structure of an aminoimidazole riboside kinase from Salmonella enterica: implications for the evolution of the ribokinase superfamily. (PubMed id 15458630)9 Zhang Y....Ealick S.E. (2004)
    9. The effect of inorganic phosphate on the activity of bacterial ribokinase. (PubMed id 11563694)9 Maj M.C. and Gupta R.S. (2001)
    10. Crystal structure of brain pyridoxal kinase, a novel member of the ribokinase superfamily. (PubMed id 12235162)9 Li M.H....Liang D.C. (2002)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 64080 HGNC: 30325 AceView: RBKS Ensembl:ENSG00000171174 euGenes: HUgn64080
    ECgene: RBKS Kegg: 64080 H-InvDB: RBKS

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for RBKS Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for RBKS gene:
    Search GeneIP for patents involving RBKS

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for RBKS  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RBKS   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for RBKS  
     OriGene Protein Over-expression Lysate for RBKS   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for RBKS   Browse 3'-UTR reporter clones for miRNA target validation  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RBKS   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RBKS  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for RBKS   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for RBKS   OriGene Custom Protein Services for RBKS  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat RBKS
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing RBKS
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RBKS
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RBKS
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RBKS
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RBKS
     GenScript Custom Purified and Recombinant Proteins Services for RBKS GenScript cDNA clones with any tag delivered in your preferred vector for RBKS
     GenScript Custom Assay Services for RBKS GenScript Custom Superior Antibodies Services for RBKS
     GenScript Custom overexpressing Cell Line Services for RBKS CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in RBKS promoter
     Search Chromatin IP Primers for RBKS
     RT2 qPCR Primer Assay in human, mouse, rat RBKS
     Search GNC Networks for RBKS
     SABiosciences PCR Arrays including human, mouse, rat RBKS
     Search Tocris compounds for RBKS
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     RBKS antibodies
     RBKS proteins
     RBKS lysates
     Antibodies for RBKS
     See all of Abcam's Antibodies, Kits and Proteins for RBKS
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Recombinant Protein for RBKS




     RBKS Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for RBKS
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RBKS
     SwitchGear 3'UTR luciferase reporter plasmids for RBKS
     SwitchGear Promoter luciferase reporter plasmids for RBKS
     ThermoFisher Antibodies for RBKS
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RBKS
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for RBKS
    Sirion Biotech Customized:
     stable knockdown cell line services for RBKS
     inducible knockdown cell line services for RBKS
     design and validation of potent shRNA sequences against RBKS
     adenovirus for potent knockdown of RBKS
     adenovirus for overexpression of RBKS
     stable overexpressing cell line services for RBKS
     inducible overexpressing cell line services for RBKS
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 14 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      RBKS gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 106 solr: 1.4