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Aliases for RBFADN Gene

Subcategory (RNA class) for RBFADN Gene

processed_transcript

Quality Score for this RNA gene is

3

Aliases for RBFADN Gene

  • RBFA Downstream Neighbor (Non-Protein Coding) 2 3

External Ids for RBFADN Gene

Previous GeneCards Identifiers for RBFADN Gene

  • GC18P077799
  • GC18P077808

Summaries for RBFADN Gene

GeneCards Summary for RBFADN Gene

RBFADN (RBFA Downstream Neighbor (Non-Protein Coding)) is an RNA Gene, and is affiliated with the processed_transcript RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBFADN Gene

Genomics for RBFADN Gene

Genomic Location for RBFADN Gene

Start:
80,046,900 bp from pter
End:
80,095,482 bp from pter
Size:
48,583 bases
Orientation:
Plus strand

Genomic View for RBFADN Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RBFADN Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBFADN Gene

No data available for Regulatory Elements for RBFADN Gene

Proteins for RBFADN Gene

Post-translational modifications for RBFADN Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBFADN Gene

Domains for RBFADN Gene

Gene Families for RBFADN Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RBFADN: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RBFADN Gene

Function for RBFADN Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RBFADN Gene

Localization for RBFADN Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RBFADN Gene

Pathways for RBFADN Gene

SuperPathways for RBFADN Gene

No Data Available

Interacting Proteins for RBFADN Gene

Gene Ontology (GO) - Biological Process for RBFADN Gene

None

No data available for Pathways by source for RBFADN Gene

Transcripts for RBFADN Gene

mRNA/cDNA for RBFADN Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RBFADN Gene

No ASD Table

Relevant External Links for RBFADN Gene

GeneLoc Exon Structure for
RBFADN
ECgene alternative splicing isoforms for
RBFADN

Expression for RBFADN Gene

mRNA expression in normal human tissues for RBFADN Gene

genes like me logo Genes that share expressions with RBFADN: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for RBFADN Gene

Orthologs for RBFADN Gene

Evolution for RBFADN Gene

ENSEMBL:
Gene Tree for RBFADN (if available)
TreeFam:
Gene Tree for RBFADN (if available)

No data available for Orthologs for RBFADN Gene

Paralogs for RBFADN Gene

No data available for Paralogs for RBFADN Gene

Variants for RBFADN Gene

Sequence variations from dbSNP and Humsavar for RBFADN Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type MAF
rs551643 -- 80,081,068(-) AGCCA(C/G)CAGGC nc-transcript-variant
rs552631 -- 80,081,190(+) TTCTC(C/T)ACCTC nc-transcript-variant
rs558084 -- 80,081,794(-) aattc(A/G)gtgtt downstream-variant-500B
rs663464 -- 80,078,362(-) CCACC(A/G)GGAAA intron-variant
rs948724 -- 80,079,841(+) ATGCA(A/G)TTGTA intron-variant

Relevant External Links for RBFADN Gene

HapMap Linkage Disequilibrium report
RBFADN

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for RBFADN Gene

Disorders for RBFADN Gene

No disorders were found for RBFADN Gene.

No data available for UniProtKB/Swiss-Prot for RBFADN Gene

Publications for RBFADN Gene

  1. A "double adaptor" method for improved shotgun library construction. (PMID: 8619474) Andersson B. … Gibbs R.A. (Anal. Biochem. 1996) 3
  2. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
  3. Large-scale concatenation cDNA sequencing. (PMID: 9110174) Yu W. … Gibbs R.A. (Genome Res. 1997) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3

Products for RBFADN Gene

Sources for RBFADN Gene

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