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Aliases for RBBP8NL Gene

Aliases for RBBP8NL Gene

  • RBBP8 N-Terminal Like 2 3 5
  • C20orf151 3 4
  • Chromosome 20 Open Reading Frame 151 2
  • Hypothetical Protein LOC140893 2

External Ids for RBBP8NL Gene

Previous HGNC Symbols for RBBP8NL Gene

  • C20orf151

Previous GeneCards Identifiers for RBBP8NL Gene

  • GC20M060986

Summaries for RBBP8NL Gene

GeneCards Summary for RBBP8NL Gene

RBBP8NL (RBBP8 N-Terminal Like) is a Protein Coding gene. An important paralog of this gene is RBBP8.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBBP8NL Gene

Genomics for RBBP8NL Gene

Regulatory Elements for RBBP8NL Gene

Enhancers for RBBP8NL Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RBBP8NL on UCSC Golden Path with GeneCards custom track

Genomic Location for RBBP8NL Gene

62,410,237 bp from pter
62,427,680 bp from pter
17,444 bases
Minus strand

Genomic View for RBBP8NL Gene

Genes around RBBP8NL on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RBBP8NL Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBBP8NL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBBP8NL Gene

Proteins for RBBP8NL Gene

  • Protein details for RBBP8NL Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    RBBP8 N-terminal-like protein
    Protein Accession:
    Secondary Accessions:
    • B2RP98
    • Q8N4Z9
    • Q9BR75
    • Q9H0Y9

    Protein attributes for RBBP8NL Gene

    664 amino acids
    Molecular mass:
    71432 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RBBP8NL Gene

Proteomics data for RBBP8NL Gene at MOPED

Post-translational modifications for RBBP8NL Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RBBP8NL Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for RBBP8NL Gene

Domains & Families for RBBP8NL Gene

Protein Domains for RBBP8NL Gene


Suggested Antigen Peptide Sequences for RBBP8NL Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RBBP8NL: view

No data available for Gene Families and UniProtKB/Swiss-Prot for RBBP8NL Gene

Function for RBBP8NL Gene

genes like me logo Genes that share phenotypes with RBBP8NL: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RBBP8NL Gene

Localization for RBBP8NL Gene

Subcellular locations from

Jensen Localization Image for RBBP8NL Gene COMPARTMENTS Subcellular localization image for RBBP8NL gene
Compartment Confidence
extracellular 5
nucleus 4
cytosol 2
plasma membrane 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RBBP8NL Gene

Pathways & Interactions for RBBP8NL Gene

SuperPathways for RBBP8NL Gene

No Data Available

Interacting Proteins for RBBP8NL Gene

Gene Ontology (GO) - Biological Process for RBBP8NL Gene


No data available for Pathways by source and SIGNOR curated interactions for RBBP8NL Gene

Drugs & Compounds for RBBP8NL Gene

No Compound Related Data Available

Transcripts for RBBP8NL Gene

mRNA/cDNA for RBBP8NL Gene

(2) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(13) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RBBP8NL Gene

RBBP8 N-terminal like:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RBBP8NL Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12
SP1: -

Relevant External Links for RBBP8NL Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RBBP8NL Gene

mRNA expression in normal human tissues for RBBP8NL Gene

mRNA differential expression in normal tissues according to GTEx for RBBP8NL Gene

This gene is overexpressed in Esophagus - Mucosa (x9.1).

Protein differential expression in normal tissues from HIPED for RBBP8NL Gene

This gene is overexpressed in Plasma (41.7), Platelet (12.7), and Heart (9.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MOPED, and MaxQB for RBBP8NL Gene

SOURCE GeneReport for Unigene cluster for RBBP8NL Gene Hs.180374

genes like me logo Genes that share expression patterns with RBBP8NL: view

Protein tissue co-expression partners for RBBP8NL Gene

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for RBBP8NL Gene

Orthologs for RBBP8NL Gene

This gene was present in the common ancestor of chordates.

Orthologs for RBBP8NL Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia RBBP8NL 35
  • 78.09 (n)
  • 66.06 (a)
  • 62 (a)
(Canis familiaris)
Mammalia RBBP8NL 35
  • 76.91 (n)
  • 66.56 (a)
  • 67 (a)
(Mus musculus)
Mammalia Rbbp8nl 35
  • 74.64 (n)
  • 63.62 (a)
Rbbp8nl 16
Rbbp8nl 36
  • 59 (a)
(Pan troglodytes)
Mammalia RBBP8NL 35
  • 98.49 (n)
  • 96.98 (a)
  • 97 (a)
(Rattus norvegicus)
Mammalia Rbbp8nl 35
  • 74.03 (n)
  • 62.08 (a)
(Monodelphis domestica)
Mammalia RBBP8NL 36
  • 41 (a)
(Ornithorhynchus anatinus)
Mammalia RBBP8NL 36
  • 46 (a)
(Gallus gallus)
Aves RBBP8NL 36
  • 33 (a)
(Anolis carolinensis)
Reptilia RBBP8NL 36
  • 37 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia MGC75903 35
(Danio rerio)
Actinopterygii RBBP8NL 36
  • 24 (a)
Species with no ortholog for RBBP8NL:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RBBP8NL Gene

Gene Tree for RBBP8NL (if available)
Gene Tree for RBBP8NL (if available)

Paralogs for RBBP8NL Gene

Paralogs for RBBP8NL Gene

(1) SIMAP similar genes for RBBP8NL Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RBBP8NL: view

Variants for RBBP8NL Gene

Sequence variations from dbSNP and Humsavar for RBBP8NL Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs3810553 - 62,414,309(+) AAGGT(C/T)CTGCA intron-variant, reference, missense
rs10888228 - 62,414,129(+) TGCTG(C/T)GGCCA intron-variant, reference, missense
rs6089366 - 62,412,681(+) GTGCT(C/T)CTGGG reference, missense
rs2236200 - 62,410,963(-) GAAAC(G/T)GACAG reference, missense
rs1059381 -- 62,410,387(-) CCTGC(C/T)CGCCA utr-variant-3-prime

Variation tolerance for RBBP8NL Gene

Residual Variation Intolerance Score: 94.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 9.57; 88.97% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for RBBP8NL Gene

Disorders for RBBP8NL Gene

Relevant External Links for RBBP8NL

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RBBP8NL Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RBBP8NL Gene

Publications for RBBP8NL Gene

  1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 2 3 4 67
  2. Comparison of tear protein levels in breast cancer patients and healthy controls using a de novo proteomic approach. (PMID: 22664934) BAPhm D. … Grus F.H. (Oncol. Rep. 2012) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3

Products for RBBP8NL Gene

Sources for RBBP8NL Gene