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Aliases for RASL12 Gene

Aliases for RASL12 Gene

  • RAS Like Family 12 2 3
  • RAS-Like Family 12 2 3 5
  • Ras Family Member Ris 2 3
  • Ras-Like Protein Ris 3 4
  • RAS-Like, Family 12 2 3
  • RIS 3 4

External Ids for RASL12 Gene

Previous GeneCards Identifiers for RASL12 Gene

  • GC15M063061
  • GC15M063132
  • GC15M065345
  • GC15M042170

Summaries for RASL12 Gene

GeneCards Summary for RASL12 Gene

RASL12 (RAS Like Family 12) is a Protein Coding gene. Diseases associated with RASL12 include dyskinesia of esophagus. GO annotations related to this gene include GTP binding. An important paralog of this gene is RERG.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RASL12 Gene

Genomics for RASL12 Gene

Regulatory Elements for RASL12 Gene

Promoters for RASL12 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RASL12 on UCSC Golden Path with GeneCards custom track

Genomic Location for RASL12 Gene

Chromosome:
15
Start:
65,045,582 bp from pter
End:
65,076,690 bp from pter
Size:
31,109 bases
Orientation:
Minus strand

Genomic View for RASL12 Gene

Genes around RASL12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RASL12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RASL12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RASL12 Gene

Proteins for RASL12 Gene

  • Protein details for RASL12 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NYN1-RASLC_HUMAN
    Recommended name:
    Ras-like protein family member 12
    Protein Accession:
    Q9NYN1
    Secondary Accessions:
    • B2RC29
    • B4DJW2
    • B4DU82

    Protein attributes for RASL12 Gene

    Size:
    266 amino acids
    Molecular mass:
    29662 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for RASL12 Gene

    Alternative splice isoforms for RASL12 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for RASL12 Gene

Proteomics data for RASL12 Gene at MOPED

Post-translational modifications for RASL12 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RASL12 Gene

No data available for DME Specific Peptides for RASL12 Gene

Domains & Families for RASL12 Gene

Gene Families for RASL12 Gene

Graphical View of Domain Structure for InterPro Entry

Q9NYN1

UniProtKB/Swiss-Prot:

RASLC_HUMAN :
  • Belongs to the small GTPase superfamily. Ras family.
Family:
  • Belongs to the small GTPase superfamily. Ras family.
genes like me logo Genes that share domains with RASL12: view

Function for RASL12 Gene

genes like me logo Genes that share phenotypes with RASL12: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RASL12 Gene

Localization for RASL12 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RASL12 Gene COMPARTMENTS Subcellular localization image for RASL12 gene
Compartment Confidence
cytosol 3
mitochondrion 2
nucleus 2
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RASL12 Gene

Pathways & Interactions for RASL12 Gene

SuperPathways for RASL12 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RASL12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RASL12 Gene

Drugs & Compounds for RASL12 Gene

No Compound Related Data Available

Transcripts for RASL12 Gene

Unigene Clusters for RASL12 Gene

RAS-like, family 12:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RASL12 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b
SP1:
SP2: -

Relevant External Links for RASL12 Gene

GeneLoc Exon Structure for
RASL12
ECgene alternative splicing isoforms for
RASL12

Expression for RASL12 Gene

mRNA expression in normal human tissues for RASL12 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for RASL12 Gene

This gene is overexpressed in Artery - Tibial (x8.8), Artery - Coronary (x4.5), and Artery - Aorta (x4.2).

Protein differential expression in normal tissues from HIPED for RASL12 Gene

This gene is overexpressed in Frontal cortex (35.4) and Prostate (10.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for RASL12 Gene



SOURCE GeneReport for Unigene cluster for RASL12 Gene Hs.27018

genes like me logo Genes that share expression patterns with RASL12: view

Primer Products

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RASL12 Gene

Orthologs for RASL12 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for RASL12 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia RASL12 35
  • 90.35 (n)
  • 93.61 (a)
RASL12 36
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia RASL12 35
  • 91.27 (n)
  • 93.56 (a)
RASL12 36
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rasl12 35
  • 88.6 (n)
  • 93.61 (a)
Rasl12 16
Rasl12 36
  • 94 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia RASL12 35
  • 99.12 (n)
  • 99.25 (a)
RASL12 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rasl12 35
  • 88.35 (n)
  • 93.98 (a)
oppossum
(Monodelphis domestica)
Mammalia RASL12 36
  • 77 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RASL12 36
  • 61 (a)
OneToOne
chicken
(Gallus gallus)
Aves RASL12 35
  • 75.54 (n)
  • 75.29 (a)
RASL12 36
  • 74 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia RASL12 36
  • 66 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia rasl12 35
  • 65.78 (n)
  • 64.26 (a)
zebrafish
(Danio rerio)
Actinopterygii rasl12 35
  • 65.33 (n)
  • 69.08 (a)
zgc63633 35
rasl12 36
  • 66 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea Y71F9AR.2 35
  • 49.07 (n)
  • 40.99 (a)
Y71F9AR.2 36
  • 32 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes RHB1 36
  • 25 (a)
OneToMany
Species with no ortholog for RASL12:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RASL12 Gene

ENSEMBL:
Gene Tree for RASL12 (if available)
TreeFam:
Gene Tree for RASL12 (if available)

Paralogs for RASL12 Gene

Paralogs for RASL12 Gene

genes like me logo Genes that share paralogs with RASL12: view

Variants for RASL12 Gene

Sequence variations from dbSNP and Humsavar for RASL12 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs2414872 -- 65,071,305(+) AGTGT(A/G)GGGGA intron-variant
rs2414873 -- 65,073,593(+) ggctg(C/T)gcggc intron-variant
rs2232752 -- 65,068,783(-) GTGGG(C/T)CCTTT intron-variant, upstream-variant-2KB
rs2232753 -- 65,065,153(-) GGACC(C/T)ACCCC intron-variant
rs2232754 -- 65,065,096(-) AAGCC(A/G)CCAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RASL12 Gene

Variant ID Type Subtype PubMed ID
nsv904308 CNV Loss 21882294

Variation tolerance for RASL12 Gene

Residual Variation Intolerance Score: 65.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.92; 19.17% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for RASL12 Gene

HapMap Linkage Disequilibrium report
RASL12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RASL12 Gene

Disorders for RASL12 Gene

MalaCards: The human disease database

(1) MalaCards diseases for RASL12 Gene - From: DISEASES

Disorder Aliases PubMed IDs
dyskinesia of esophagus
  • dyskinesia of oesophagus
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for RASL12

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RASL12
genes like me logo Genes that share disorders with RASL12: view

No data available for UniProtKB/Swiss-Prot and Genatlas for RASL12 Gene

Publications for RASL12 Gene

  1. Expressed sequence tag analysis of adult human iris for the NEIBank project: steroid-response factors and similarities with retinal pigment epithelium. (PMID: 12107412) Wistow G. … Peterson K. (Mol. Vis. 2002) 2 3 4 67
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  5. High-throughput mapping of a dynamic signaling network in mammalian cells. (PMID: 15761153) Barrios-Rodiles M. … Wrana J.L. (Science 2005) 3

Products for RASL12 Gene

Sources for RASL12 Gene

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