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Aliases for RASL11B Gene

Aliases for RASL11B Gene

  • RAS-Like, Family 11, Member B 2 3

External Ids for RASL11B Gene

Summaries for RASL11B Gene

Entrez Gene Summary for RASL11B Gene

  • RASL11B is a member of the small GTPase protein family with a high degree of similarity to RAS (see HRAS, MIM 190020) proteins.[supplied by OMIM, Nov 2008]

GeneCards Summary for RASL11B Gene

RASL11B (RAS-Like, Family 11, Member B) is a Protein Coding gene. GO annotations related to this gene include GTP binding and GTPase activity. An important paralog of this gene is RASL12.

Gene Wiki entry for RASL11B Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RASL11B Gene

Genomics for RASL11B Gene

Genomic Location for RASL11B Gene

Start:
52,862,290 bp from pter
End:
52,866,835 bp from pter
Size:
4,546 bases
Orientation:
Plus strand

Genomic View for RASL11B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RASL11B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RASL11B Gene

Regulatory Elements for RASL11B Gene

Proteins for RASL11B Gene

  • Protein details for RASL11B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BPW5-RSLBB_HUMAN
    Recommended name:
    Ras-like protein family member 11B
    Protein Accession:
    Q9BPW5
    Secondary Accessions:
    • B2RC51
    • Q96KC5

    Protein attributes for RASL11B Gene

    Size:
    248 amino acids
    Molecular mass:
    27508 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RASL11B Gene

Proteomics data for RASL11B Gene at MOPED

Post-translational modifications for RASL11B Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RASL11B Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for RASL11B Gene

Domains for RASL11B Gene

Suggested Antigen Peptide Sequences for RASL11B Gene

Graphical View of Domain Structure for InterPro Entry

Q9BPW5

UniProtKB/Swiss-Prot:

RSLBB_HUMAN
Family:
  • Belongs to the small GTPase superfamily. Ras family.:
    • Q9BPW5
genes like me logo Genes that share domains with RASL11B: view

No data available for Gene Families for RASL11B Gene

Function for RASL11B Gene

Molecular function for RASL11B Gene

UniProtKB/Swiss-Prot Induction: By TGFB1.

Gene Ontology (GO) - Molecular Function for RASL11B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005525 GTP binding IEA --
GO:0015093 ferrous iron transmembrane transporter activity --
genes like me logo Genes that share ontologies with RASL11B: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RASL11B Gene

Localization for RASL11B Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RASL11B Gene COMPARTMENTS Subcellular localization image for RASL11B gene
Compartment Confidence
cytosol 2
nucleus 2
peroxisome 1

Gene Ontology (GO) - Cellular Components for RASL11B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane --
genes like me logo Genes that share ontologies with RASL11B: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for RASL11B Gene

Pathways for RASL11B Gene

SuperPathways for RASL11B Gene

No Data Available

Interacting Proteins for RASL11B Gene

Gene Ontology (GO) - Biological Process for RASL11B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006184 obsolete GTP catabolic process --
GO:0007165 signal transduction --
GO:0007264 small GTPase mediated signal transduction IEA --
GO:0015031 protein transport --
GO:0015684 ferrous iron transport --
genes like me logo Genes that share ontologies with RASL11B: view

No data available for Pathways by source for RASL11B Gene

Transcripts for RASL11B Gene

mRNA/cDNA for RASL11B Gene

Unigene Clusters for RASL11B Gene

RAS-like, family 11, member B:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RASL11B Gene

No ASD Table

Relevant External Links for RASL11B Gene

GeneLoc Exon Structure for
RASL11B
ECgene alternative splicing isoforms for
RASL11B

Expression for RASL11B Gene

mRNA expression in normal human tissues for RASL11B Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for RASL11B Gene

This gene is overexpressed in Ovary (11.2) and Spleen (4.9).

SOURCE GeneReport for Unigene cluster for RASL11B Gene Hs.8035

mRNA Expression by UniProt/SwissProt for RASL11B Gene

Q9BPW5-RSLBB_HUMAN
Tissue specificity: Widely expressed with highest levels in placenta and primary macrophages.
genes like me logo Genes that share expressions with RASL11B: view

No data available for Protein expression for RASL11B Gene

Orthologs for RASL11B Gene

This gene was present in the common ancestor of animals.

Orthologs for RASL11B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RASL11B 35
  • 99.59 (n)
  • 99.59 (a)
RASL11B 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RASL11B 35
  • 89.65 (n)
  • 95.97 (a)
RASL11B 36
  • 96 (a)
OneToOne
dog
(Canis familiaris)
Mammalia RASL11B 35
  • 89.52 (n)
  • 93.55 (a)
RASL11B 36
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rasl11b 35
  • 86.1 (n)
  • 94.74 (a)
Rasl11b 16
Rasl11b 36
  • 94 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia RASL11B 36
  • 88 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RASL11B 36
  • 85 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rasl11b 35
  • 87.58 (n)
  • 94.74 (a)
chicken
(Gallus gallus)
Aves RASL11B 35
  • 78.56 (n)
  • 81.33 (a)
RASL11B 36
  • 80 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia RASL11B 36
  • 74 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia MGC53580 35
tropical clawed frog
(Silurana tropicalis)
Amphibia rasl11b 35
  • 72.87 (n)
  • 74.09 (a)
zebrafish
(Danio rerio)
Actinopterygii rasl11b 35
  • 66.1 (n)
  • 68.78 (a)
rasl11b 36
  • 66 (a)
OneToOne
zgc55750 35
fruit fly
(Drosophila melanogaster)
Insecta CG8519 36
  • 34 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 29 (a)
OneToMany
Species with no ortholog for RASL11B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RASL11B Gene

ENSEMBL:
Gene Tree for RASL11B (if available)
TreeFam:
Gene Tree for RASL11B (if available)

Paralogs for RASL11B Gene

Paralogs for RASL11B Gene

Selected SIMAP similar genes for RASL11B Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with RASL11B: view

Variants for RASL11B Gene

Sequence variations from dbSNP and Humsavar for RASL11B Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs8287 -- 52,866,419(+) ATATT(C/T)TGTAT utr-variant-3-prime
rs9646 -- 52,866,776(+) ACTCA(A/T)GCTTT utr-variant-3-prime
rs881743 -- 52,861,283(-) TCCGC(C/T)ATCCA upstream-variant-2KB
rs881744 -- 52,861,320(-) GGCAA(A/G)ATGTC upstream-variant-2KB
rs2062253 -- 52,866,891(-) TCATA(C/G)TTTGT downstream-variant-500B

Relevant External Links for RASL11B Gene

HapMap Linkage Disequilibrium report
RASL11B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for RASL11B Gene

Disorders for RASL11B Gene

No disorders were found for RASL11B Gene.

No data available for UniProtKB/Swiss-Prot for RASL11B Gene

Publications for RASL11B Gene

  1. Cloning, genomic organization, and tissue-specific expression of the RASL11B gene. (PMID: 17628721) Stolle K. … Lorkowski S. (Biochim. Biophys. Acta 2007) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Rasl11a, member of a novel small monomeric GTPase gene family, is differentially expressed in prostate tumors. (PMID: 15033445) Louro R. … Reis E.M. (Biochem. Biophys. Res. Commun. 2004) 3 4
  4. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for RASL11B Gene

Sources for RASL11B Gene

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